(Q36812844)

English

Explanation by the double-metal-ion mechanism of catalysis for the differential metal ion effects on the cleavage rates of 5'-oxy and 5'-thio substrates by a hammerhead ribozyme

scientific article published on December 1997

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scholarly article

1 reference

Europe PubMed Central

16 August 2017

Explanation by the double-metal-ion mechanism of catalysis for the differential metal ion effects on the cleavage rates of 5'-oxy and 5'-thio substrates by a hammerhead ribozyme (English)

1 reference

Europe PubMed Central

16 August 2017

0 references

author name string

Zhou DM

1

1 reference

Europe PubMed Central

16 August 2017

Zhang LH

2

1 reference

Europe PubMed Central

16 August 2017

Taira K

3

1 reference

Europe PubMed Central

16 August 2017

language of work or name

0 references

publication date

1 December 1997

1 reference

Europe PubMed Central

16 August 2017

Proceedings of the National Academy of Sciences of the United States of America

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Europe PubMed Central

16 August 2017

94

1 reference

Europe PubMed Central

16 August 2017

26

1 reference

Europe PubMed Central

16 August 2017

14343-14348

1 reference

Europe PubMed Central

16 August 2017

Observations on catalysis by hammerhead ribozymes are consistent with a two-divalent-metal-ion mechanism

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24970

29 September 2017

Capturing the structure of a catalytic RNA intermediate: the hammerhead ribozyme

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24970

29 September 2017

Ribozymes: structure and mechanism in RNA catalysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24970

29 September 2017

How many catalytic RNAs? Ions and the Cheshire cat conjecture.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24970

29 September 2017

Metal ion catalysis in the Tetrahymena ribozyme reaction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24970

29 September 2017

A general two-metal-ion mechanism for catalytic RNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24970

29 September 2017

Nuclease-resistant chimeric ribozymes containing deoxyribonucleotides and phosphorothioate linkages

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24970

29 September 2017

Three-dimensional structure of a hammerhead ribozyme

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24970

29 September 2017

Ribozymes: a distinct class of metalloenzymes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24970

29 September 2017

Recognition and catalysis in nucleic acid chemistry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24970

29 September 2017

The crystal structure of an all-RNA hammerhead ribozyme: a proposed mechanism for RNA catalytic cleavage

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24970

29 September 2017

The hammerhead RNA domain, a model ribozyme

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24970

29 September 2017

Self-cleavage of RNA in the replication of small pathogens of plants and animals

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24970

29 September 2017

Site-specific cleavage by metal ion cofactors and inhibitors of M1 RNA, the catalytic subunit of RNase P from Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24970

29 September 2017

Rate limiting P-O(5') bond cleavage of RNA fragment: ab initio molecular orbital calculations on the base-catalyzed hydrolysis of phosphate

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24970

29 September 2017

A trinucleotide can promote metal ion-dependent specific cleavage of RNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24970

29 September 2017

Small catalytic RNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24970

29 September 2017

Structural domains of transfer RNA molecules

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24970

29 September 2017

Theoretical analyses on the role of Mg2+ ions in ribozyme reactions.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24970

27 June 2018

A hammerhead ribozyme inhibits the proliferation of an RNA coliphage SP in Escherichia coli.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24970

5 September 2018

Simple RNA enzymes with new and highly specific endoribonuclease activities

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24970

5 September 2018

A small catalytic oligoribonucleotide

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.94.26.14343

21 January 2018

Electrostatic Interactions That Determine the Rate of Pseudorotation Processes in Oxyphosphorane Intermediates: Implications with Respect to the Roles of Metal Ions in the Enzymatic Cleavage of RNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/9405614

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Energetics of RNA cleavage: implications for the mechanism of action of ribozymes

1 reference

https://pubmed.ncbi.nlm.nih.gov/9405614

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Ribozyme-mediated cleavage of a substrate analogue containing an internucleotide-bridging 5'-phosphorothioate: evidence for the single-metal model

1 reference

https://pubmed.ncbi.nlm.nih.gov/9405614

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Magnesium-mediated conversion of an inactive form of a hammerhead ribozyme to an active complex with its substrate. An investigation by NMR spectroscopy

1 reference

https://pubmed.ncbi.nlm.nih.gov/9405614

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Kinetic and equilibrium studies of the ribonuclease-catalyzed hydrolysis of uridine 2',3'-cyclic phosphate

1 reference

https://pubmed.ncbi.nlm.nih.gov/9405614

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Synthesis and Properties of Diuridine Phosphate Analogues Containing Thio and Amino Modifications

1 reference

https://pubmed.ncbi.nlm.nih.gov/9405614

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Dinuclear metal complexes for the efficient RNA hydrolysis

1 reference

https://pubmed.ncbi.nlm.nih.gov/9405614

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Ionic interactions and the global conformations of the hammerhead ribozyme

1 reference

https://pubmed.ncbi.nlm.nih.gov/9405614

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Evidence for the role of solvated metal hydroxide in the hammerhead cleavage mechanism

1 reference

https://pubmed.ncbi.nlm.nih.gov/9405614

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1073/PNAS.94.26.14343

1 reference

Europe PubMed Central

16 August 2017

1997PNAS...9414343Z

0 references

1 reference

Europe PubMed Central

16 August 2017

1 reference

Europe PubMed Central

16 August 2017

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0 references

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