(Q36908424)

17 August 2017

Stochastic simulation of enzyme-catalyzed reactions with disparate timescales (English)

1 reference

17 August 2017

5

1 reference

17 August 2017

Debashis Barik

1

1 reference

17 August 2017

Mark R Paul

series ordinal

2

1 reference

17 August 2017

William T Baumann

series ordinal

3

1 reference

17 August 2017

Yang Cao

series ordinal

4

1 reference

17 August 2017

language of work or name

English

0 references

publication date

11 July 2008

1 reference

17 August 2017

1 reference

17 August 2017

95

1 reference

17 August 2017

3563-3574

1 reference

17 August 2017

8

1 reference

Modeling networks of coupled enzymatic reactions using the total quasi-steady state approximation

17 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553150

Modeling M-phase control in Xenopus oocyte extracts: the surveillance mechanism for unreplicated DNA.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553150

An amplified sensitivity arising from covalent modification in biological systems

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553150

Classical versus stochastic kinetics modeling of biochemical reaction systems

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553150

Numerical analysis of a comprehensive model of M-phase control in Xenopus oocyte extracts and intact embryos.

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553150

Adaptive explicit-implicit tau-leaping method with automatic tau selection

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553150

Accelerated stochastic simulation of the stiff enzyme-substrate reaction

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553150

Quasiequilibrium approximation of fast reaction kinetics in stochastic biochemical systems.

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553150

The slow-scale stochastic simulation algorithm.

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553150

The numerical stability of leaping methods for stochastic simulation of chemically reacting systems

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553150

Extending the quasi-steady state approximation by changing variables.

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553150

Comment on "Stiffness in stochastic chemically reacting systems: the implicit tau-leaping method" [J. Chem. Phys. 119, 12784 (2003)]

4 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18621809

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The total quasi-steady-state approximation is valid for reversible enzyme kinetics

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18621809

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1529/BIOPHYSJ.108.129155

1 reference

17 August 2017

1 reference

17 August 2017

1 reference