(Q36909437)

17 August 2017

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title

Halting a cellular production line: responses to ribosomal pausing during translation (English)

1 reference

17 August 2017

J Ross Buchan

1

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17 August 2017

Ian Stansfield

series ordinal

2

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17 August 2017

publication date

1 September 2007

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17 August 2017

number of pages

13

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based on heuristic

inferred from page(s)

published in

Biology of the Cell

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17 August 2017

volume

99

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17 August 2017

issue

9

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17 August 2017

page(s)

475-487

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Competition between frameshifting, termination and suppression at the frameshift site in the Escherichia coli release factor-2 mRNA.

17 August 2017

cites work

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

Growth rate-optimised tRNA abundance and codon usage.

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

Localization of ASH1 mRNA particles in living yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

She2p, a novel RNA-binding protein tethers ASH1 mRNA to the Myo4p myosin motor via She3p

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

tRNA properties help shape codon pair preferences in open reading frames

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

P-site pairing subtleties revealed by the effects of different tRNAs on programmed translational bypassing where anticodon re-pairing to mRNA is separated from dissociation

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

Escherichia coli sbcC mutants permit stable propagation of DNA replicons containing a long palindrome

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

Rabbit beta-globin is extended beyond its UGA stop codon by multiple suppressions and translational reading gaps

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

RelE toxins from bacteria and Archaea cleave mRNAs on translating ribosomes, which are rescued by tmRNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

Silent mutations affect in vivo protein folding in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

Protein folding within the cell is influenced by controlled rates of polypeptide elongation

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

The folding of the bifunctional TRP3 protein in yeast is influenced by a translational pause which lies in a region of structural divergence with Escherichia coli indoleglycerol-phosphate synthase.

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

The Rate of Peptidyl-tRNA Dissociation from the Ribosome during Minigene Expression Depends on the Nature of the Last Decoding Interaction

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

Selective charging of tRNA isoacceptors induced by amino-acid starvation

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

Endonucleolytic cleavage of eukaryotic mRNAs with stalls in translation elongation

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

Co-variation of tRNA abundance and codon usage in Escherichia coli at different growth rates.

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

Selective charging of tRNA isoacceptors explains patterns of codon usage.

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

A novel programed frameshift expresses the POL3 gene of retrotransposon Ty3 of yeast: frameshifting without tRNA slippage

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

Analysis of the requirements for transcription pausing in the tryptophan operon.

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

Physical evidence for distinct mechanisms of translational control by upstream open reading frames

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

Ribosomes can slide over and beyond "hungry" codons, resuming protein chain elongation many nucleotides downstream

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

Identification of sbcD mutations as cosuppressors of recBC that allow propagation of DNA palindromes in Escherichia coli K-12.

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

A codon window in mRNA downstream of the initiation codon where NGG codons give strongly reduced gene expression in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

The ClpXP and ClpAP proteases degrade proteins with carboxy-terminal peptide tails added by the SsrA-tagging system

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

Expression levels influence ribosomal frameshifting at the tandem rare arginine codons AGG_AGG and AGA_AGA in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

Proline residues at the C terminus of nascent chains induce SsrA tagging during translation termination

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

One protein from two open reading frames: mechanism of a 50 nt translational bypass.

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

Coupling of open reading frames by translational bypassing

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

Analysis of the roles of tRNA structure, ribosomal protein L9, and the bacteriophage T4 gene 60 bypassing signals during ribosome slippage on mRNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

Ribosome release factor RF4 and termination factor RF3 are involved in dissociation of peptidyl-tRNA from the ribosome

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

Origins of minigene-dependent growth inhibition in bacterial cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

A persistent untranslated sequence within bacteriophage T4 DNA topoisomerase gene 60.

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

Correlation between the abundance of Escherichia coli transfer RNAs and the occurrence of the respective codons in its protein genes: A proposal for a synonymous codon choice that is optimal for the E. coli translational system

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

Codon pair utilization biases influence translational elongation step times

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

Signals for ribosomal frameshifting in the Rous sarcoma virus gag-pol region

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

Processivity errors of gene expression in Escherichia coli.

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

Initiation factors IF1 and IF2 synergistically remove peptidyl-tRNAs with short polypeptides from the P-site of translating Escherichia coli ribosomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

Role of a peptide tagging system in degradation of proteins synthesized from damaged messenger RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

A "silent" polymorphism in the MDR1 gene changes substrate specificity

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

A tRNA-like structure is present in 10Sa RNA, a small stable RNA from Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

Translation activates the paused transcription complex and restores transcription of the trp operon leader region

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

Detection of transcription-pausing in vivo in the trp operon leader region

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

Protein tagging at rare codons is caused by tmRNA action at the 3' end of nonstop mRNA generated in response to ribosome stalling

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

Mating type switching in yeast controlled by asymmetric localization of ASH1 mRNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

Mistranslational errors associated with the rare arginine codon CGG in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

Sequestration of specific tRNA species cognate to the last sense codon of an overproduced gratuitous protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

Ribosome editing and the error catastrophe hypothesis of cellular aging

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

The inhibitory upstream open reading frame from mammalian S-adenosylmethionine decarboxylase mRNA has a strict sequence specificity in critical positions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

A mechanical explanation of RNA pseudoknot function in programmed ribosomal frameshifting.

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

The pair of arginine codons AGA AGG close to the initiation codon of the lambda int gene inhibits cell growth and protein synthesis by accumulating peptidyl-tRNAArg4.

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

Attenuation in the Escherichia coli tryptophan operon: role of RNA secondary structure involving the tryptophan codon region

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

Single synonymous codon substitution eliminates pausing during chloramphenicol acetyl transferase synthesis on Escherichia coli ribosomes in vitro

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

SsrA-mediated peptide tagging caused by rare codons and tRNA scarcity

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

Orthologs of a novel archaeal and of the bacterial peptidyl-tRNA hydrolase are nonessential in yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

The upstream open reading frame of the mRNA encoding S-adenosylmethionine decarboxylase is a polyamine-responsive translational control element.

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

A physiological connection between tmRNA and peptidyl-tRNA hydrolase functions in Escherichia coli.

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

Charging levels of four tRNA species in Escherichia coli Rel(+) and Rel(-) strains during amino acid starvation: a simple model for the effect of ppGpp on translational accuracy.

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

Absolute in vivo translation rates of individual codons in Escherichia coli. The two glutamic acid codons GAA and GAG are translated with a threefold difference in rate.

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

Nascent-peptide-mediated ribosome stalling at a stop codon induces mRNA cleavage resulting in nonstop mRNA that is recognized by tmRNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

Synthesis of proteins in Escherichia coli is limited by the concentration of free ribosomes. Expression from reporter genes does not always reflect functional mRNA levels.

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

An integrated model of the transcription complex in elongation, termination, and editing

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

Ribosome stalling is responsible for arginine-specific translational attenuation in Neurospora crassa

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

Arginine-specific regulation mediated by the Neurospora crassa arg-2 upstream open reading frame in a homologous, cell-free in vitro translation system

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

A nascent peptide is required for ribosomal bypass of the coding gap in bacteriophage T4 gene 60.

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

Yeast tRNALeu(Anticodon U-A-G) translates all six leucine codons in extracts from interferon treated cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

Pausing of RNA polymerase during in vitro transcription of the tryptophan operon leader region

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

Role of regulatory features of the trp operon of Escherichia coli in mediating a response to a nutritional shift

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

Localization and anchoring of mRNA in budding yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBC20070037

21 January 2018

Identifiers

DOI

10.1042/BC20070037

1 reference

17 August 2017

1 reference