(Q36978834)

English

Identification of cis-acting nucleotides and a structural feature in West Nile virus 3'-terminus RNA that facilitate viral minus strand RNA synthesis

scientific article published on May 2013

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scholarly article

1 reference

Europe PubMed Central

17 August 2017

Identification of cis-acting nucleotides and a structural feature in West Nile virus 3'-terminus RNA that facilitate viral minus strand RNA synthesis (English)

1 reference

Europe PubMed Central

17 August 2017

West Nile virus

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author name string

William G Davis

1

1 reference

Europe PubMed Central

17 August 2017

Mausumi Basu

2

1 reference

Europe PubMed Central

17 August 2017

Elizabeth J Elrod

3

1 reference

Europe PubMed Central

17 August 2017

Markus W Germann

4

1 reference

Europe PubMed Central

17 August 2017

Margo A Brinton

5

1 reference

Europe PubMed Central

17 August 2017

language of work or name

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publication date

1 May 2013

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Europe PubMed Central

17 August 2017

Journal of Virology

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Europe PubMed Central

17 August 2017

87

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Europe PubMed Central

17 August 2017

13

1 reference

Europe PubMed Central

17 August 2017

7622-7636

1 reference

Europe PubMed Central

17 August 2017

Dynamic RNA structures in the dengue virus genome

1 reference

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29 September 2017

RNA sequences and structures required for the recruitment and activity of the dengue virus polymerase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3700269

29 September 2017

Terminal structures of West Nile virus genomic RNA and their interactions with viral NS5 protein

1 reference

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29 September 2017

Differential Expression of Interferon (IFN) Regulatory Factors and IFN-Stimulated Genes at Early Times after West Nile Virus Infection of Mouse Embryo Fibroblasts

1 reference

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29 September 2017

Interaction between the Cellular Protein eEF1A and the 3'-Terminal Stem-Loop of West Nile Virus Genomic RNA Facilitates Viral Minus-Strand RNA Synthesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3700269

29 September 2017

A 5' RNA element promotes dengue virus RNA synthesis on a circular genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3700269

29 September 2017

Elongation factor 1alpha binds to the region of the metallothionein-1 mRNA implicated in perinuclear localization--importance of an internal stem-loop

1 reference

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29 September 2017

The building blocks and motifs of RNA architecture

1 reference

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29 September 2017

A critical role for eukaryotic elongation factor 1A-1 in lipotoxic cell death

1 reference

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29 September 2017

Long-Range RNA-RNA Interactions Circularize the Dengue Virus Genome

1 reference

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29 September 2017

The topology of bulges in the long stem of the flavivirus 3' stem-loop is a major determinant of RNA replication competence.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3700269

29 September 2017

Enhancement of dengue virus translation: role of the 3' untranslated region and the terminal 3' stem-loop domain

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3700269

29 September 2017

Transmission cycles, host range, evolution and emergence of arboviral disease

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3700269

29 September 2017

Structure and function of the 3' terminal six nucleotides of the west nile virus genome in viral replication

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3700269

29 September 2017

Significance in Replication of the Terminal Nucleotides of the Flavivirus Genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3700269

29 September 2017

Functional Analysis of Mosquito-Borne Flavivirus Conserved Sequence Elements within 3' Untranslated Region of West Nile Virus by Use of a Reporting Replicon That Differentiates between Viral Translation and RNA Replication

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3700269

29 September 2017

Mfold web server for nucleic acid folding and hybridization prediction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3700269

29 September 2017

A stable full-length yellow fever virus cDNA clone and the role of conserved RNA elements in flavivirus replication

1 reference

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29 September 2017

Moonlighting functions of polypeptide elongation factor 1: from actin bundling to zinc finger protein R1-associated nuclear localization

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3700269

29 September 2017

Interactions of elongation factor 1alpha with F-actin and beta-actin mRNA: implications for anchoring mRNA in cell protrusions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3700269

29 September 2017

The NS5A protein of bovine viral diarrhoea virus interacts with the alpha subunit of translation elongation factor-1.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3700269

29 September 2017

Sequence comparison and secondary structure analysis of the 3' noncoding region of flavivirus genomes reveals multiple pseudoknots.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3700269

29 September 2017

Derivation of a structural model for the c-myc IRES

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3700269

29 September 2017

Base-pairing between untranslated regions facilitates translation of uncapped, nonpolyadenylated viral RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3700269

29 September 2017

An infectious clone of the West Nile flavivirus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3700269

29 September 2017

Translation elongation factor-1 alpha interacts with the 3' stem-loop region of West Nile virus genomic RNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3700269

29 September 2017

Remarkable morphological variability of a common RNA folding motif: the GNRA tetraloop-receptor interaction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3700269

29 September 2017

F-actin sequesters elongation factor 1alpha from interaction with aminoacyl-tRNA in a pH-dependent reaction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3700269

29 September 2017

Cell proteins bind specifically to West Nile virus minus-strand 3' stem-loop RNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3700269

29 September 2017

Evidence for the Existence of a Pseudoknot Structure at the 3‘ Terminus of the Flavivirus Genomic RNA †

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3700269

29 September 2017

Lessons from an evolving rRNA: 16S and 23S rRNA structures from a comparative perspective.

1 reference

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29 September 2017

Protein synthesis elongation factor EF-1 alpha is essential for ubiquitin-dependent degradation of certain N alpha-acetylated proteins and may be substituted for by the bacterial elongation factor EF-Tu

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3700269

29 September 2017

Frequent use of the same tertiary motif by self-folding RNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3700269

29 September 2017

BHK cell proteins that bind to the 3' stem-loop structure of the West Nile virus genome RNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3700269

29 September 2017

The 3'-nucleotides of flavivirus genomic RNA form a conserved secondary structure

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3700269

29 September 2017

Analysis of structural properties which possibly are characteristic for the 3'-terminal sequence of the genome RNA of flaviviruses

1 reference

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29 September 2017

Conserved elements in the 3' untranslated region of flavivirus RNAs and potential cyclization sequences

1 reference

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29 September 2017

Eukaryotic protein elongation factors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3700269

29 September 2017

Microtubule severing by elongation factor 1 alpha

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3700269

29 September 2017

West Nile virus.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3700269

27 June 2018

Protein synthesis elongation factor EF-1 alpha is an isopeptidase essential for ubiquitin-dependent degradation of certain proteolytic substrates

1 reference

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27 June 2018

Cytopathic effect of rubella virus in BHK21 cells and growth to high titers in suspension culture

1 reference

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27 June 2018

Hepatitis C virus NS4A inhibits cap-dependent and the viral IRES-mediated translation through interacting with eukaryotic elongation factor 1A.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3700269

4 September 2018

The flavivirus-conserved penta-nucleotide in the 3' stem-loop of the West Nile virus genome requires a specific sequence and structure for RNA synthesis, but not for viral translation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3700269

4 September 2018

The majority of the nucleotides in the top loop of the genomic 3' terminal stem loop structure are cis-acting in a West Nile virus infectious clone

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3700269

4 September 2018

Identifiers

10.1128/JVI.00212-13

1 reference

Europe PubMed Central

17 August 2017

1 reference

Europe PubMed Central

17 August 2017

1 reference

Europe PubMed Central

17 August 2017

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