(Q37034267)

English

Chromatin associated sense and antisense noncoding RNAs are transcribed from the var gene family of virulence genes of the malaria parasite Plasmodium falciparum

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scholarly article

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Europe PubMed Central

17 August 2017

Chromatin associated sense and antisense noncoding RNAs are transcribed from the var gene family of virulence genes of the malaria parasite Plasmodium falciparum (English)

1 reference

Europe PubMed Central

17 August 2017

Plasmodium falciparum

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author name string

Christian Epp

1

1 reference

Europe PubMed Central

17 August 2017

Felomena Li

2

1 reference

Europe PubMed Central

17 August 2017

Cali A Howitt

3

1 reference

Europe PubMed Central

17 August 2017

Thanat Chookajorn

4

1 reference

Europe PubMed Central

17 August 2017

Kirk W Deitsch

5

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Europe PubMed Central

17 August 2017

language of work or name

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publication date

26 November 2008

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Europe PubMed Central

17 August 2017

1 reference

Europe PubMed Central

17 August 2017

15

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Europe PubMed Central

17 August 2017

1

1 reference

Europe PubMed Central

17 August 2017

116-127

1 reference

Europe PubMed Central

17 August 2017

A regulatable transgene expression system for cultured Plasmodium falciparum parasites

1 reference

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29 September 2017

Genome-wide discovery and verification of novel structured RNAs in Plasmodium falciparum

1 reference

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29 September 2017

Structural RNAs of known and unknown function identified in malaria parasites by comparative genomics and RNA analysis

1 reference

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29 September 2017

Mechanisms underlying mutually exclusive expression of virulence genes by malaria parasites

1 reference

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29 September 2017

Variable switching rates of malaria virulence genes are associated with chromosomal position

1 reference

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Noncoding RNAs and intranuclear positioning in monoallelic gene expression

1 reference

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29 September 2017

Plasmodium falciparum var gene expression is developmentally controlled at the level of RNA polymerase II-mediated transcription initiation

1 reference

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29 September 2017

Epigenetic memory at malaria virulence genes

1 reference

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29 September 2017

Mutually exclusive expression of virulence genes by malaria parasites is regulated independently of antigen production

1 reference

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29 September 2017

Strict pairing of var promoters and introns is required for var gene silencing in the malaria parasite Plasmodium falciparum

1 reference

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29 September 2017

Transcriptome analysis of antigenic variation in Plasmodium falciparum--var silencing is not dependent on antisense RNA

1 reference

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1 reference

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29 September 2017

Telomeric heterochromatin propagation and histone acetylation control mutually exclusive expression of antigenic variation genes in malaria parasites

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2612763

29 September 2017

Antigenic variation in Plasmodium falciparum is associated with movement of var loci between subnuclear locations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2612763

29 September 2017

The global distribution of clinical episodes of Plasmodium falciparum malaria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2612763

29 September 2017

A silenced Plasmodium falciparum var promoter can be activated in vivo through spontaneous deletion of a silencing element in the intron

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2612763

29 September 2017

A synthetic A tail rescues yeast nuclear accumulation of a ribozyme-terminated transcript

1 reference

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29 September 2017

Plasmodium biology: genomic gleanings

1 reference

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29 September 2017

Sub-grouping of Plasmodium falciparum 3D7 var genes based on sequence analysis of coding and non-coding regions

1 reference

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29 September 2017

Selective upregulation of a single distinctly structured var gene in chondroitin sulphate A-adhering Plasmodium falciparum involved in pregnancy-associated malaria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2612763

29 September 2017

A well-conserved Plasmodium falciparum var gene shows an unusual stage-specific transcript pattern.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2612763

29 September 2017

Dosage compensation: an intertwined world of RNA and chromatin remodelling

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2612763

29 September 2017

Genome sequence of the human malaria parasite Plasmodium falciparum

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2612763

29 September 2017

Coordinated methyl and RNA binding is required for heterochromatin localization of mammalian HP1alpha

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2612763

29 September 2017

Chromosomal silencing and localization are mediated by different domains of Xist RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2612763

29 September 2017

Expression of Xist RNA is sufficient to initiate macrochromatin body formation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2612763

29 September 2017

Serial analysis of gene expression in Plasmodium falciparum reveals the global expression profile of erythrocytic stages and the presence of anti-sense transcripts in the malarial parasite

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2612763

29 September 2017

Guilt by association: non-coding RNAs, chromosome-specific proteins and dosage compensation in Drosophila

1 reference

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29 September 2017

Tsix, a gene antisense to Xist at the X-inactivation centre

1 reference

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The genome sequence of Rickettsia prowazekii and the origin of mitochondria

1 reference

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29 September 2017

Genome Sequence of an Obligate Intracellular Pathogen of Humans: Chlamydia trachomatis

1 reference

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29 September 2017

Antigenic variation in malaria: in situ switching, relaxed and mutually exclusive transcription of var genes during intra-erythrocytic development in Plasmodium falciparum

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2612763

29 September 2017

roX1 RNA paints the X chromosome of male Drosophila and is regulated by the dosage compensation system

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2612763

29 September 2017

The large diverse gene family var encodes proteins involved in cytoadherence and antigenic variation of plasmodium falciparum-infected erythrocytes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2612763

29 September 2017

Switches in expression of Plasmodium falciparum var genes correlate with changes in antigenic and cytoadherent phenotypes of infected erythrocytes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2612763

29 September 2017

Cloning the P. falciparum gene encoding PfEMP1, a malarial variant antigen and adherence receptor on the surface of parasitized human erythrocytes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2612763

29 September 2017

5' flanking region of var genes nucleate histone modification patterns linked to phenotypic inheritance of virulence traits in malaria parasites

1 reference

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Sequencing the termini of capped viral RNA by 5'-3' ligation and PCR

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2612763

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Nuclear non-coding RNAs are transcribed from the centromeres of Plasmodium falciparum and are associated with centromeric chromatin.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2612763

4 September 2018

Identification of basic transcriptional elements required for rif gene transcription.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2612763

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3' gene regulatory elements required for expression of the Plasmodiumfalciparum developmental protein, Pfs25.

1 reference

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4 September 2018

Heterochromatin silencing and locus repositioning linked to regulation of virulence genes in Plasmodium falciparum

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2612763

4 September 2018

Evidence for the importance of genetic structuring to the structural and functional specialization of the Plasmodium falciparum var gene family.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2612763

4 September 2018

Plasmodium falciparum var genes are regulated by two regions with separate promoters, one upstream of the coding region and a second within the intron.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2612763

4 September 2018

The 3D7var5.2 (var COMMON) type var gene family is commonly expressed in non-placental Plasmodium falciparum malaria.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2612763

4 September 2018

In situ detection of RNA in blood- and mosquito-stage malaria parasites

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2612763

4 September 2018

Malaria. Cooperative silencing elements in var genes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2612763

4 September 2018

Frequent ectopic recombination of virulence factor genes in telomeric chromosome clusters of P. falciparum.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2612763

4 September 2018

Intra-cluster recombination and var transcription switches in the antigenic variation of Plasmodium falciparum.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2612763

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A simple RNA analysis method shows var and rif multigene family expression patterns in Plasmodium falciparum

1 reference

https://pubmed.ncbi.nlm.nih.gov/19037012

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The transcript encoding the circumsporozoite antigen of Plasmodium berghei utilizes heterogeneous polyadenylation sites

1 reference

https://pubmed.ncbi.nlm.nih.gov/19037012

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1261/RNA.1080109

1 reference

Europe PubMed Central

17 August 2017

1 reference

Europe PubMed Central

17 August 2017

1 reference

Europe PubMed Central

17 August 2017

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