(Q37077372)

English

Molecular recognition of poly(A) by small ligands: an alternative method of analysis reveals nanomolar, cooperative and shape-selective binding

scientific article published on 10 December 2008

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

Molecular recognition of poly(A) by small ligands: an alternative method of analysis reveals nanomolar, cooperative and shape-selective binding (English)

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

author name string

Ozgül Persil Cetinkol

1

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

Nicholas V Hud

2

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

language of work or name

0 references

publication date

10 December 2008

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

Nucleic Acids Research

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

37

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

2

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

611-621

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

DNA as a target for anticancer compounds: methods to determine the mode of binding and the mechanism of action

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2632892

29 September 2017

Harnessing DNA intercalation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2632892

29 September 2017

Addressing the problems of base pairing and strand cyclization in template-directed synthesis: a case for the utility and necessity of 'molecular midwives' and reversible backbone linkages for the origin of proto-RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2632892

29 September 2017

DNA-programmed assembly of nanostructures

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2632892

29 September 2017

The anticancer agent ellipticine unwinds DNA by intercalative binding in an orientation parallel to base pairs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2632892

29 September 2017

Intercalation of organic dye molecules into double-stranded DNA. Part 2: the annelated quinolizinium ion as a structural motif in DNA intercalators

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2632892

29 September 2017

A synthetic A tail rescues yeast nuclear accumulation of a ribozyme-terminated transcript

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2632892

29 September 2017

Assembly of an antiparallel homo-adenine DNA duplex by small-molecule binding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2632892

29 September 2017

Competing hydrophobic and screened-coulomb interactions in hepatitis B virus capsid assembly

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2632892

29 September 2017

Extending nature's leads: the anticancer agent ellipticine

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2632892

29 September 2017

Controlling nucleic acid secondary structure by intercalation: effects of DNA strand length on coralyne-driven duplex disproportionation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2632892

29 September 2017

Revelation of a cryptic major histocompatibility complex class II-restricted tumor epitope in a novel RNA-processing enzyme.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2632892

29 September 2017

Complete disproportionation of duplex poly(dT)*poly(dA) into triplex poly(dT)*poly(dA)*poly(dT) and poly(dA) by coralyne

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2632892

29 September 2017

Identification and functional characterization of neo-poly(A) polymerase, an RNA processing enzyme overexpressed in human tumors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2632892

29 September 2017

Novel CFTR chloride channel activators identified by screening of combinatorial libraries based on flavone and benzoquinolizinium lead compounds

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2632892

29 September 2017

A DNA-fuelled molecular machine made of DNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2632892

29 September 2017

Nucleic acid targeting: therapeutic strategies for the 21st century

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2632892

29 September 2017

A nanomechanical device based on the B-Z transition of DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2632892

29 September 2017

Coralyne has a preference for intercalation between TA.T triples in intramolecular DNA triple helices

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2632892

29 September 2017

DNA and associated targets for drug design

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2632892

29 September 2017

Intercalative binding of ellipticine to DNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2632892

29 September 2017

Visualization of drug--nucleic acid interactions at atomic resolution. VI. Structure of two drug--dinucleoside monophosphate crystalline complexes, ellipticine--5-iodocytidylyy (3'-5') guanosine and 3,5,6,8-tetramethyl-N-methyl phenanthrolinium--5-i

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2632892

29 September 2017

Life and death in the cytoplasm: messages from the 3' end.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2632892

29 September 2017

To build a virus capsid. An equilibrium model of the self assembly of polyhedral protein complexes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2632892

27 June 2018

Studies of the binding of actinomycin and related compounds to DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2632892

27 June 2018

Prospects for plant-derived antibacterials.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2632892

4 September 2018

Molecular recognition of nucleic acids: coralyne binds strongly to poly(A).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2632892

4 September 2018

Micelle formation and crystallization as paradigms for virus assembly

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2632892

4 September 2018

Synthesis and reactions of some heterocyclic azacyanines

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2632892

4 September 2018

Molecular aspects on the specific interaction of cytotoxic plant alkaloid palmatine to poly(A)

1 reference

https://pubmed.ncbi.nlm.nih.gov/19073699

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Specific binding and self-structure induction to poly(A) by the cytotoxic plant alkaloid sanguinarine

1 reference

https://pubmed.ncbi.nlm.nih.gov/19073699

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Berberine complexes with DNA in the berberine-induced apoptosis in human leukemic HL-60 cells

1 reference

https://pubmed.ncbi.nlm.nih.gov/19073699

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Submicromolar, selective G-quadruplex ligands from one pot: thermodynamic and structural studies of human telomeric DNA binding by azacyanines

1 reference

https://pubmed.ncbi.nlm.nih.gov/19073699

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Sequence and structural selectivity of nucleic acid binding ligands

1 reference

https://pubmed.ncbi.nlm.nih.gov/19073699

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Coralyne binds tightly to both T.A.T- and C.G.C(+)-containing DNA triplexes

1 reference

https://pubmed.ncbi.nlm.nih.gov/19073699

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The molecular structure of polyadenylic acid

1 reference

https://pubmed.ncbi.nlm.nih.gov/19073699

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Programmable DNA self-assemblies for nanoscale organization of ligands and proteins

1 reference

https://pubmed.ncbi.nlm.nih.gov/19073699

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Berberine-induced apoptosis of human leukemia HL-60 cells is associated with down-regulation of nucleophosmin/B23 and telomerase activity

1 reference

https://pubmed.ncbi.nlm.nih.gov/19073699

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Lattice model of equilibrium polymerization. VII. Understanding the role of "cooperativity" in self-assembly

1 reference

https://pubmed.ncbi.nlm.nih.gov/19073699

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Berberine, a strong polyriboadenylic acid binding plant alkaloid: spectroscopic, viscometric, and thermodynamic study

1 reference

https://pubmed.ncbi.nlm.nih.gov/19073699

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Study on the anti-inflammatory action of Berberis vulgaris root extract, alkaloid fractions and pure alkaloids

1 reference

https://pubmed.ncbi.nlm.nih.gov/19073699

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

G-quadruplex DNA: a target for drug design

1 reference

https://pubmed.ncbi.nlm.nih.gov/19073699

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Molecular recognition of a RNA:DNA hybrid structure

1 reference

https://pubmed.ncbi.nlm.nih.gov/19073699

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Dye-induced aggregation of single stranded RNA: a mechanistic approach

1 reference

https://pubmed.ncbi.nlm.nih.gov/19073699

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/NAR/GKN977

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

ResearchGate publication ID

0 references

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