(Q37099916)

English

Spliceosome assembly pathways for different types of alternative splicing converge during commitment to splice site pairing in the A complex.

scientific article published on 08 December 2008

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scholarly article

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19064642%20AND%20SRC:MED&resulttype=core&format=json

18 January 2020

Spliceosome assembly pathways for different types of alternative splicing converge during commitment to splice site pairing in the A complex (English)

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Europe PubMed Central

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18 January 2020

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alternative mRNA splicing, via spliceosome

1 reference

based on heuristic

inferred from title

Klemens J Hertel

3

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19064642%20AND%20SRC:MED&resulttype=core&format=json

18 January 2020

author name string

Matthew V Kotlajich

1

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18 January 2020

Tara L Crabb

2

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18 January 2020

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publication date

8 December 2008

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18 January 2020

Molecular and Cellular Biology

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18 January 2020

29

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18 January 2020

4

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18 January 2020

1072-1082

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19064642%20AND%20SRC:MED&resulttype=core&format=json

18 January 2020

Death by splicing: tumor suppressor RBM5 freezes splice-site pairing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643811

14 September 2017

Combinatorial control of exon recognition.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643811

14 September 2017

Rearrangement of competing U2 RNA helices within the spliceosome promotes multiple steps in splicing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643811

14 September 2017

Composition and three-dimensional EM structure of double affinity-purified, human prespliceosomal A complexes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643811

14 September 2017

The splicing regulators Tra and Tra2 are unusually potent activators of pre-mRNA splicing.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643811

14 September 2017

Linking splicing to Pol II transcription stabilizes pre-mRNAs and influences splicing patterns

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643811

14 September 2017

The architecture of pre-mRNAs affects mechanisms of splice-site pairing.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643811

14 September 2017

Modified nucleotides at the 5' end of human U2 snRNA are required for spliceosomal E-complex formation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643811

14 September 2017

Finishing the euchromatic sequence of the human genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643811

14 September 2017

Prp5 bridges U1 and U2 snRNPs and enables stable U2 snRNP association with intron RNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643811

14 September 2017

Genome-wide survey of human alternative pre-mRNA splicing with exon junction microarrays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643811

14 September 2017

ATP requirement for Prp5p function is determined by Cus2p and the structure of U2 small nuclear RNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643811

14 September 2017

Adenosine 5'-O-(3-thio)triphosphate (ATPgammaS) is a substrate for the nucleotide hydrolysis and RNA unwinding activities of eukaryotic translation initiation factor eIF4A

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643811

14 September 2017

Pre-mRNA splicing: awash in a sea of proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643811

14 September 2017

Enhancer-dependent 5'-splice site control of fruitless pre-mRNA splicing.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643811

14 September 2017

Mechanisms of alternative pre-messenger RNA splicing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643811

14 September 2017

Protein composition of human prespliceosomes isolated by a tobramycin affinity-selection method

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643811

14 September 2017

Capturing splicing complexes to study structure and mechanism

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643811

14 September 2017

Characterization of novel SF3b and 17S U2 snRNP proteins, including a human Prp5p homologue and an SF3b DEAD-box protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643811

14 September 2017

Functional association of U2 snRNP with the ATP-independent spliceosomal complex E

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643811

14 September 2017

ATP can be dispensable for prespliceosome formation in yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643811

14 September 2017

Resolution of the mammalian E complex and the ATP-dependent spliceosomal complexes on native agarose mini-gels

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643811

14 September 2017

Protein functions in pre-mRNA splicing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643811

14 September 2017

Architectural limits on split genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643811

14 September 2017

Exon recognition in vertebrate splicing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643811

14 September 2017

Excision of an intact intron as a novel lariat structure during pre-mRNA splicing in vitro

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643811

14 September 2017

Cloning and domain structure of the mammalian splicing factor U2AF

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643811

14 September 2017

The spliceosome assembly pathway in mammalian extracts

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643811

14 September 2017

Polypyrimidine tract binding protein controls the transition from exon definition to an intron defined spliceosome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643811

29 September 2017

Initial splice-site recognition and pairing during pre-mRNA splicing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643811

29 September 2017

Electrophoretic separation of complexes involved in the splicing of precursors to mRNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643811

27 June 2018

An ATP-independent complex commits pre-mRNA to the mammalian spliceosome assembly pathway

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643811

27 June 2018

Protein components specifically associated with prespliceosome and spliceosome complexes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643811

27 June 2018

RBM5/Luca-15/H37 regulates Fas alternative splice site pairing after exon definition.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643811

3 September 2018

Competition between the ATPase Prp5 and branch region-U2 snRNA pairing modulates the fidelity of spliceosome assembly

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643811

3 September 2018

Analyzing mechanisms of alternative pre-mRNA splicing using in vitro splicing assays.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643811

3 September 2018

Commitment to splice site pairing coincides with A complex formation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643811

3 September 2018

Early organization of pre-mRNA during spliceosome assembly.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643811

3 September 2018

A factor, U2AF, is required for U2 snRNP binding and splicing complex assembly

1 reference

https://pubmed.ncbi.nlm.nih.gov/19064642

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Adenosine phosphorothioates (ATP alpha S and ATP tau S) differentially affect the two steps of mammalian pre-mRNA splicing

1 reference

https://pubmed.ncbi.nlm.nih.gov/19064642

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A functional association between the 5' and 3' splice site is established in the earliest prespliceosome complex (E) in mammals

1 reference

https://pubmed.ncbi.nlm.nih.gov/19064642

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

An exonic splicing silencer represses spliceosome assembly after ATP-dependent exon recognition

1 reference

https://pubmed.ncbi.nlm.nih.gov/19064642

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The 5' end of U2 snRNA is in close proximity to U1 and functional sites of the pre-mRNA in early spliceosomal complexes

1 reference

https://pubmed.ncbi.nlm.nih.gov/19064642

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1128/MCB.01071-08

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19064642%20AND%20SRC:MED&resulttype=core&format=json

18 January 2020

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19064642%20AND%20SRC:MED&resulttype=core&format=json

18 January 2020

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19064642%20AND%20SRC:MED&resulttype=core&format=json

18 January 2020

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