(Q37101576)

English

Probing the role of aromatic residues at the secondary saccharide-binding sites of human salivary alpha-amylase in substrate hydrolysis and bacterial binding

scientific article published on 14 October 2008

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

Probing the role of aromatic residues at the secondary saccharide-binding sites of human salivary alpha-amylase in substrate hydrolysis and bacterial binding (English)

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

author name string

Chandran Ragunath

1

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

Suba G A Manuel

2

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

Venkat Venkataraman

3

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

Hameetha B R Sait

4

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

Chinnasamy Kasinathan

5

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

Narayanan Ramasubbu

6

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

language of work or name

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publication date

14 October 2008

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

number of pages

17

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inferred from page(s)

Journal of Molecular Biology

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

384

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

5

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

1232-1248

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

The 'pair of sugar tongs' site on the non-catalytic domain C of barley alpha-amylase participates in substrate binding and activity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644404

14 September 2017

Starch-binding domains in the post-genome era.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644404

14 September 2017

Oligosaccharide binding to barley alpha-amylase 1.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644404

14 September 2017

Structural analysis of dispersin B, a biofilm-releasing glycoside hydrolase from the periodontopathogen Actinobacillus actinomycetemcomitans

1 reference

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14 September 2017

Coot: model-building tools for molecular graphics

1 reference

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14 September 2017

Structure of human salivary alpha-amylase at 1.6 A resolution: implications for its role in the oral cavity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644404

14 September 2017

Automated refinement of protein models

1 reference

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14 September 2017

The CCP4 suite: programs for protein crystallography

1 reference

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14 September 2017

Carbohydrate-binding modules: fine-tuning polysaccharide recognition

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644404

14 September 2017

Human salivary alpha-amylase Trp58 situated at subsite -2 is critical for enzyme activity.

1 reference

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14 September 2017

THE PREPARATION OF I-131-LABELLED HUMAN GROWTH HORMONE OF HIGH SPECIFIC RADIOACTIVITY

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644404

14 September 2017

The structure of barley alpha-amylase isozyme 1 reveals a novel role of domain C in substrate recognition and binding: a pair of sugar tongs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644404

14 September 2017

Probing the role of a mobile loop in substrate binding and enzyme activity of human salivary amylase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644404

14 September 2017

Crystallographic evidence of a transglycosylation reaction: ternary complexes of a psychrophilic alpha-amylase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644404

14 September 2017

The mechanism of salivary amylase hydrolysis: role of residues at subsite S2'.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644404

14 September 2017

Expression, characterization, and biochemical properties of recombinant human salivary amylase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644404

14 September 2017

Role of Streptococcus gordonii amylase-binding protein A in adhesion to hydroxyapatite, starch metabolism, and biofilm formation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644404

14 September 2017

Enzyme-catalyzed condensation reaction in a mammalian alpha-amylase. High-resolution structural analysis of an enzyme-inhibitor complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644404

14 September 2017

Relationship of sequence and structure to specificity in the alpha-amylase family of enzymes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644404

14 September 2017

Estimation of protein secondary structure from circular dichroism spectra: comparison of CONTIN, SELCON, and CDSSTR methods with an expanded reference set

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644404

14 September 2017

New type of starch-binding domain: the direct repeat motif in the C-terminal region of Bacillus sp. no. 195 alpha-amylase contributes to starch binding and raw starch degrading.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644404

14 September 2017

Subsite mapping of the human pancreatic alpha-amylase active site through structural, kinetic, and mutagenesis techniques

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644404

14 September 2017

Streptococcus gordonii biofilm formation: identification of genes that code for biofilm phenotypes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644404

14 September 2017

Prevalence of the amylase-binding protein A gene (abpA) in oral streptococci

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644404

14 September 2017

The roles of histidine residues at the starch-binding site in streptococcal-binding activities of human salivary amylase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644404

14 September 2017

All three surface tryptophans in Type IIa cellulose binding domains play a pivotal role in binding both soluble and insoluble ligands

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644404

14 September 2017

Structure of a pancreatic alpha-amylase bound to a substrate analogue at 2.03 A resolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644404

14 September 2017

Structure of the Aspergillus oryzae alpha-amylase complexed with the inhibitor acarbose at 2.0 A resolution

1 reference

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14 September 2017

Nomenclature for sugar-binding subsites in glycosyl hydrolases

1 reference

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14 September 2017

Crystal structure of pig pancreatic alpha-amylase isoenzyme II, in complex with the carbohydrate inhibitor acarbose

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644404

14 September 2017

The structure of human pancreatic alpha-amylase at 1.8 A resolution and comparisons with related enzymes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644404

14 September 2017

The active center of a mammalian alpha-amylase. Structure of the complex of a pancreatic alpha-amylase with a carbohydrate inhibitor refined to 2.2-A resolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644404

14 September 2017

Site-directed mutagenesis of histidine 93, aspartic acid 180, glutamic acid 205, histidine 290, and aspartic acid 291 at the active site and tryptophan 279 at the raw starch binding site in barley alpha-amylase 1.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644404

14 September 2017

Carbohydrate binding sites in a pancreatic alpha-amylase-substrate complex, derived from X-ray structure analysis at 2.1 A resolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644404

14 September 2017

Cleavage of Structural Proteins during the Assembly of the Head of Bacteriophage T4

1 reference

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14 September 2017

Characterization of salivary alpha-amylase binding to Streptococcus sanguis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2644404

14 September 2017

Structural relationship between the enzymatic and streptococcal binding sites of human salivary alpha-amylase

1 reference

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14 September 2017

Streptococcus crista sp. nov., a viridans streptococcus with tufted fibrils, isolated from the human oral cavity and throat

1 reference

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14 September 2017

Characterization of an amylase-binding component of Streptococcus gordonii G9B

1 reference

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14 September 2017

Salivary statherin. Dependence on sequence, charge, hydrogen bonding potency, and helical conformation for adsorption to hydroxyapatite and inhibition of mineralization

1 reference

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14 September 2017

Structural characteristics of human salivary statherin: a model for boundary lubrication at the enamel surface

1 reference

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29 September 2017

Salivary alpha-amylase: role in dental plaque and caries formation

1 reference

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29 September 2017

Saliva-bacterium interactions in oral microbial ecology

1 reference

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29 September 2017

Identification and analysis of a gene (abpA) encoding a major amylase-binding protein in Streptococcus gordonii

1 reference

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Raw-starch-digesting and thermostable alpha-amylase from the yeast Cryptococcus sp. S-2: purification, characterization, cloning and sequencing

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27 June 2018

A functional raw starch-binding domain of barley alpha-amylase expressed in Escherichia coli

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Use of a replica-plate assay for the rapid assessment of salivary protein-bacteria interactions

1 reference

https://pubmed.ncbi.nlm.nih.gov/18951906

12 December 2020

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1 reference

https://pubmed.ncbi.nlm.nih.gov/18951906

12 December 2020

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inferred from PubMed ID database lookup

A new clan of CBM families based on bioinformatics of starch-binding domains from families CBM20 and CBM21

1 reference

https://pubmed.ncbi.nlm.nih.gov/18951906

12 December 2020

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The evolution of putative starch-binding domains

1 reference

https://pubmed.ncbi.nlm.nih.gov/18951906

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Crystallization and preliminary X-ray diffraction studies of human salivary alpha-amylase

1 reference

https://pubmed.ncbi.nlm.nih.gov/18951906

12 December 2020

based on heuristic

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Characterization of the alpha-amylase receptor of Streptococcus gordonii NCTC 7868

1 reference

https://pubmed.ncbi.nlm.nih.gov/18951906

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Processing of X-ray diffraction data collected in oscillation mode

1 reference

https://pubmed.ncbi.nlm.nih.gov/18951906

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The binding of human salivary alpha-amylase by oral strains of streptococcal bacteria

1 reference

https://pubmed.ncbi.nlm.nih.gov/18951906

12 December 2020

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inferred from PubMed ID database lookup

Emergence in human dental plaque and host distribution of amylase-binding streptococci

1 reference

https://pubmed.ncbi.nlm.nih.gov/18951906

12 December 2020

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Comparison of amylase-binding proteins in oral streptococci

1 reference

https://pubmed.ncbi.nlm.nih.gov/18951906

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Salivary amylase promotes adhesion of oral streptococci to hydroxyapatite

1 reference

https://pubmed.ncbi.nlm.nih.gov/18951906

12 December 2020

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inferred from PubMed ID database lookup

Hydroxyapatite binding domains in salivary proteins

1 reference

https://pubmed.ncbi.nlm.nih.gov/18951906

12 December 2020

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Circular dichroism studies of barnase and its mutants: characterization of the contribution of aromatic side chains

1 reference

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inferred from PubMed ID database lookup

Identifiers

10.1016/J.JMB.2008.09.089

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

release_xagi3qsdibhflgum5s5jf5jbwu

1 reference

https://api.fatcat.wiki/v0/release/xagi3qsdibhflgum5s5jf5jbwu

24 November 2022

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mapped directly with Wikidata item

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

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