(Q37187273)

English

Novel Escherichia coli RF1 mutants with decreased translation termination activity and increased sensitivity to the cytotoxic effect of the bacterial toxins Kid and RelE

scientific article published on 28 October 2008

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scholarly article

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19019162%20AND%20SRC:MED&resulttype=core&format=json

17 January 2020

Novel Escherichia coli RF1 mutants with decreased translation termination activity and increased sensitivity to the cytotoxic effect of the bacterial toxins Kid and RelE (English)

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19019162%20AND%20SRC:MED&resulttype=core&format=json

17 January 2020

Escherichia coli

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Elizabeth Diago-Navarro

1

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17 January 2020

Richard H. Buckingham

3

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17 January 2020

author name string

Liliana Mora

2

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17 January 2020

Ramón Díaz-Orejas

4

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17 January 2020

Marc Lemonnier

5

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17 January 2020

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publication date

28 October 2008

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17 January 2020

Molecular Microbiology

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17 January 2020

71

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17 January 2020

1

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17 January 2020

66-78

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17 January 2020

Structural basis for translation termination on the 70S ribosome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680264

6 September 2017

RF3 induces ribosomal conformational changes responsible for dissociation of class I release factors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680264

6 September 2017

The tmRNA system for translational surveillance and ribosome rescue.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680264

6 September 2017

Shutdown decay of mRNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680264

6 September 2017

Crystal structures of complexes between aminoglycosides and decoding A site oligonucleotides: role of the number of rings and positive charges in the specific binding leading to miscoding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680264

6 September 2017

Structural insights into translational fidelity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680264

6 September 2017

Prokaryotic toxin-antitoxin stress response loci

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680264

6 September 2017

Interference of mRNA function by sequence-specific endoribonuclease PemK.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680264

6 September 2017

MazF Cleaves Cellular mRNAs Specifically at ACA to Block Protein Synthesis in Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680264

6 September 2017

Toxin-antitoxin loci as stress-response-elements: ChpAK/MazF and ChpBK cleave translated RNAs and are counteracted by tmRNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680264

6 September 2017

Structures of five antibiotics bound at the peptidyl transferase center of the large ribosomal subunit

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680264

6 September 2017

Release of peptide promoted by the GGQ motif of class 1 release factors regulates the GTPase activity of RF3.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680264

6 September 2017

A posttermination ribosomal complex is the guanine nucleotide exchange factor for peptide release factor RF3.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680264

6 September 2017

Tetracycline antibiotics: mode of action, applications, molecular biology, and epidemiology of bacterial resistance

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680264

6 September 2017

Recognition of cognate transfer RNA by the 30S ribosomal subunit

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680264

6 September 2017

Programmed cell death in Escherichia coli: some antibiotics can trigger mazEF lethality

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680264

6 September 2017

Aminoglycosides: perspectives on mechanisms of action and resistance and strategies to counter resistance

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680264

6 September 2017

The accuracy of codon recognition by polypeptide release factors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680264

6 September 2017

Release factor RF3 in E.coli accelerates the dissociation of release factors RF1 and RF2 from the ribosome in a GTP-dependent manner

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680264

6 September 2017

Tight regulation, modulation, and high-level expression by vectors containing the arabinose PBAD promoter

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680264

6 September 2017

Studies on transformation of Escherichia coli with plasmids

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680264

6 September 2017

Cleavage of Structural Proteins during the Assembly of the Head of Bacteriophage T4

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680264

6 September 2017

Release factors differing in specificity for terminator codons

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680264

6 September 2017

Pedigrees of some mutant strains of Escherichia coli K-12

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680264

6 September 2017

Cloning, genetic characterization, and nucleotide sequence of the hemA-prfA operon of Salmonella typhimurium

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680264

6 September 2017

Cell killing by the F plasmid CcdB protein involves poisoning of DNA-topoisomerase II complexes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680264

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680264

14 September 2017

The identity of the base following the stop codon determines the efficiency of in vivo translational termination in Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680264

28 September 2017

Model for RNA binding and the catalytic site of the RNase Kid of the bacterial parD toxin-antitoxin system.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680264

26 June 2018

The SAXS solution structure of RF1 differs from its crystal structure and is similar to its ribosome bound cryo-EM structure

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680264

26 June 2018

RNase/anti-RNase activities of the bacterial parD toxin-antitoxin system

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680264

26 June 2018

Release factor 2 frameshifting sites in different bacteria.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680264

26 June 2018

Rates of aminoacyl-tRNA selection at 29 sense codons in vivo.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680264

26 June 2018

Stop codon recognition by release factors induces structural rearrangement of the ribosomal decoding center that is productive for peptide release

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680264

3 September 2018

Methylation of bacterial release factors RF1 and RF2 is required for normal translation termination in vivo.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680264

3 September 2018

A model for how ribosomal release factors induce peptidyl-tRNA cleavage in termination of protein synthesis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680264

3 September 2018

Reduced action of polypeptide release factors induces mRNA cleavage and tmRNA tagging at stop codons in Escherichia coli.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680264

3 September 2018

Crystal structure of archaeal toxin-antitoxin RelE-RelB complex with implications for toxin activity and antitoxin effects.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680264

3 September 2018

Effects of two cis-acting mutations on the regulation and expression of release factor one in Escherichia coli.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680264

3 September 2018

Insights into the specificity of RNA cleavage by the Escherichia coli MazF toxin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680264

3 September 2018

Disruption of the F plasmid partition complex in vivo by partition protein SopA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680264

3 September 2018

A tripeptide 'anticodon' deciphers stop codons in messenger RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680264

3 September 2018

Mutations in the highly conserved GGQ motif of class 1 polypeptide release factors abolish ability of human eRF1 to trigger peptidyl-tRNA hydrolysis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680264

3 September 2018

Crystal Structures of the Ribosome in Complex with Release Factors RF1 and RF2 Bound to a Cognate Stop Codon

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2680264

20 October 2018

Genetic identification of two functional regions in the antitoxin of the parD killer system of plasmid R1

1 reference

https://pubmed.ncbi.nlm.nih.gov/19019162

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The Bacterial Toxin RelE Displays Codon-Specific Cleavage of mRNAs in the Ribosomal A Site

1 reference

https://pubmed.ncbi.nlm.nih.gov/19019162

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cleavage of the A site mRNA codon during ribosome pausing provides a mechanism for translational quality control

1 reference

https://pubmed.ncbi.nlm.nih.gov/19019162

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Ribosome stalling during translation elongation induces cleavage of mRNA being translated in Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/19019162

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A temperature-sensitive mutant of Escherichia coli that shows enhanced misreading of UAG/A and increased efficiency for some tRNA nonsense suppressors

1 reference

https://pubmed.ncbi.nlm.nih.gov/19019162

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Killing of Escherichia coli cells modulated by components of the stability system ParD of plasmid R1

1 reference

https://pubmed.ncbi.nlm.nih.gov/19019162

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genetic implication for an interaction between release factor one and ribosomal protein L7/L12 in vivo

1 reference

https://pubmed.ncbi.nlm.nih.gov/19019162

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The Escherichia coli relBE genes belong to a new toxin-antitoxin gene family

1 reference

https://pubmed.ncbi.nlm.nih.gov/19019162

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Novel roles for classical factors at the interface between translation termination and initiation

1 reference

https://pubmed.ncbi.nlm.nih.gov/19019162

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1111/J.1365-2958.2008.06510.X

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19019162%20AND%20SRC:MED&resulttype=core&format=json

17 January 2020

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19019162%20AND%20SRC:MED&resulttype=core&format=json

17 January 2020

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19019162%20AND%20SRC:MED&resulttype=core&format=json

17 January 2020

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