(Q37299868)

19 August 2017

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title

Chromatin: linking structure and function in the nucleolus (English)

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19 August 2017

Peter C McKeown

1

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19 August 2017

Peter J Shaw

series ordinal

2

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19 August 2017

publication date

17 October 2008

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19 August 2017

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19 August 2017

volume

118

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19 August 2017

issue

1

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19 August 2017

page(s)

11-23

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https://scigraph.springernature.com/pub.10.1007/s00412-008-0184-2

19 August 2017

exact match

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cites work

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Nucleosome binding by the polymerase I transactivator upstream binding factor displaces linker histone H1.

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A chromosomal memory triggered by Xist regulates histone methylation in X inactivation

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Transcription factor UAF, expansion and contraction of ribosomal DNA (rDNA) repeats, and RNA polymerase switch in transcription of yeast rDNA

21 January 2018

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rRNA gene silencing and nucleolar dominance: insights into a chromosome-scale epigenetic on/off switch

21 January 2018

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Regulation of rRNA synthesis in human and mouse cells is not determined by changes in active gene count

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00412-008-0184-2

Histones are required for transcription of yeast rRNA genes by RNA polymerase I.

21 January 2018

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12 December 2020

Acetylation of UBF changes during the cell cycle and regulates the interaction of UBF with RNA polymerase I.

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12 December 2020

Different epigenetic layers engage in complex crosstalk to define the epigenetic state of mammalian rRNA genes

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12 December 2020

Histone deacetylation by Sir2 generates a transcriptionally repressed nucleoprotein complex

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12 December 2020

Phosphorylation of histone H2B at DNA double-strand breaks.

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12 December 2020

Lysine-79 of histone H3 is hypomethylated at silenced loci in yeast and mammalian cells: a potential mechanism for position-effect variegation

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12 December 2020

The chromatin remodeling complex NoRC targets HDAC1 to the ribosomal gene promoter and represses RNA polymerase I transcription

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12 December 2020

A major nucleolar protein, nucleolin, induces chromatin decondensation by binding to histone Hl

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12 December 2020

Mitotic occupancy and lineage-specific transcriptional control of rRNA genes by Runx2.

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12 December 2020

Localization of Sir2p: the nucleolus as a compartment for silent information regulators

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12 December 2020

Modification of wheat rDNA loci by rye B chromosomes: a chromatin organization model.

1 reference

12 December 2020

The chromatin remodeling complex NoRC controls replication timing of rRNA genes

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12 December 2020

To be or not to be in the nucleolus

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12 December 2020

Epigenetic silencing of RNA polymerase I transcription: a role for DNA methylation and histone modification in nucleolar dominance

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12 December 2020

Mammalian Sir2 homolog SIRT7 is an activator of RNA polymerase I transcription

1 reference

12 December 2020

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12 December 2020

Pol I transcription and pre-rRNA processing are coordinated in a transcription-dependent manner in mammalian cells

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12 December 2020

Phylogenomics of the nucleosome

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12 December 2020

The Arabidopsis SUVR4 protein is a nucleolar histone methyltransferase with preference for monomethylated H3K9.

1 reference

12 December 2020

The silencing complex SAS-I links histone acetylation to the assembly of repressed chromatin by CAF-I and Asf1 in Saccharomyces cerevisiae

1 reference

12 December 2020

Epigenetic control of rDNA loci in response to intracellular energy status

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12 December 2020

Differential immunostaining of plant chromosomes by antibodies recognizing acetylated histone H4 variants

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12 December 2020

Requirement of the protein B23 for nucleolar disassembly induced by the FRGY2a family proteins

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12 December 2020

Ribosomal chromatin organization

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12 December 2020

The Arabidopsis chromatin-modifying nuclear siRNA pathway involves a nucleolar RNA processing center

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12 December 2020

MicroRNA-206 colocalizes with ribosome-rich regions in both the nucleolus and cytoplasm of rat myogenic cells

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12 December 2020

Characterization of AtNUC-L1 reveals a central role of nucleolin in nucleolus organization and silencing of AtNUC-L2 gene in Arabidopsis

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12 December 2020

Heterochromatin in animals and plants. Similarities and differences

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12 December 2020

[Tracking the interactions of rRNA processing proteins during nucleolar assembly in living cells]

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12 December 2020

Histone H3 lysine 9 methylation occurs rapidly at the onset of random X chromosome inactivation.

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12 December 2020

The concept of self-organization in cellular architecture

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12 December 2020

Separation of silencing from perinuclear anchoring functions in yeast Ku80, Sir4 and Esc1 proteins.

1 reference

12 December 2020

Epigenetic programming of the rRNA promoter by MBD3.

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12 December 2020

Ultrastructural changes of the carp (Cyprinus carpio) hepatocyte nucleolus during seasonal acclimatization

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12 December 2020

Different rRNA gene expression in primary and adventitious roots of Allium cepa L.

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12 December 2020

Structure and function of the nucleolus in the spotlight

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12 December 2020

Differential regulation of strand-specific transcripts from Arabidopsis centromeric satellite repeats

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12 December 2020

Nuclear pore complexes in the organization of silent telomeric chromatin

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12 December 2020

Localization and processing from a polycistronic precursor of novel snoRNAs in maize

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12 December 2020

Epigenetic silencing of RNA polymerase I transcription

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12 December 2020

RNA polymerase I in yeast transcribes dynamic nucleosomal rDNA.

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12 December 2020

Transcriptional silencing and longevity protein Sir2 is an NAD-dependent histone deacetylase

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12 December 2020

Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functions

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12 December 2020

Two different chromatin structures coexist in ribosomal RNA genes throughout the cell cycle

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12 December 2020

Association of the RENT complex with nontranscribed and coding regions of rDNA and a regional requirement for the replication fork block protein Fob1 in rDNA silencing

1 reference

12 December 2020

Endogenous and silencing-associated small RNAs in plants

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12 December 2020

Sirtuins deacetylate and activate mammalian acetyl-CoA synthetases

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12 December 2020

Functional proteomic analysis of human nucleolus

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12 December 2020

Transcriptional activation triggers deposition and removal of the histone variant H3.3.

1 reference

12 December 2020

Directed proteomic analysis of the human nucleolus

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12 December 2020

A new role for a yeast transcriptional silencer gene, SIR2, in regulation of recombination in ribosomal DNA.

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12 December 2020

Suppression of histone H1 genes in Arabidopsis results in heritable developmental defects and stochastic changes in DNA methylation

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12 December 2020

Histone H4 acetylation of euchromatin and heterochromatin is cell cycle dependent and correlated with replication rather than with transcription

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12 December 2020

A nuclear FK506-binding protein is a histone chaperone regulating rDNA silencing

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12 December 2020

Putative involvement of the histone acetyltransferase Tip60 in ribosomal gene transcription

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12 December 2020

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12 December 2020

Methylated DNA and MeCP2 recruit histone deacetylase to repress transcription

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12 December 2020

Gene conversion of ribosomal DNA in Nicotiana tabacum is associated with undermethylated, decondensed and probably active gene units

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12 December 2020

Nucleolar dominance: a model for rRNA gene silencing

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12 December 2020

Does Saccharomyces need an organized nucleolus?

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12 December 2020

Centromere-specific acetylation of histone H4 in barley detected through three-dimensional microscopy.

1 reference

12 December 2020

Reversible disassembly of somatic nucleoli by the germ cell proteins FRGY2a and FRGY2b

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12 December 2020

DNaseI-hypersensitive sites at promoter-like sequences in the spacer of Xenopus laevis and Xenopus borealis ribosomal DNA

1 reference

12 December 2020

Nucleolar dominance and silencing of transcription

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12 December 2020

Tomographic distribution of acetylated histone H4 in plant chromosomes, nuclei and nucleoli

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12 December 2020

Arabidopsis histone deacetylase HDA6 is required for maintenance of transcriptional gene silencing and determines nuclear organization of rDNA repeats

1 reference

12 December 2020

Global patterns of histone modifications

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12 December 2020

Assembly of variant histones into chromatin

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12 December 2020

Epigenetic mechanism of rRNA gene silencing: temporal order of NoRC-mediated histone modification, chromatin remodeling, and DNA methylation

1 reference

12 December 2020

HDA6, a putative histone deacetylase needed to enhance DNA methylation induced by double-stranded RNA

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12 December 2020

In vitromethylation ofHpaII sites InXenpus laevzsrDNA does not affect its transcription in oocytes

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12 December 2020

The CNA1 histone of the ciliate Tetrahymena thermophila is essential for chromosome segregation in the germline micronucleus

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12 December 2020

The centromere: hub of chromosomal activities.

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12 December 2020

A novel histone variant localized in nucleoli of higher plant cells

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12 December 2020

Natural variation in nucleolar dominance reveals the relationship between nucleolus organizer chromatin topology and rRNA gene transcription in Arabidopsis

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12 December 2020

The silence of the ribosomal RNA genes

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12 December 2020

Self-organization versus Watchmaker: stochastic dynamics of cellular organization

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12 December 2020

A conserved histone variant enriched in nucleoli of mammalian cells

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12 December 2020

The structure and function of Xenopus NO38-core, a histone chaperone in the nucleolus

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12 December 2020

Arabidopsis primary microRNA processing proteins HYL1 and DCL1 define a nuclear body distinct from the Cajal body

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12 December 2020

Chromatin structure and transcription of the R1- and R2-inserted rRNA genes of Drosophila melanogaster

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12 December 2020

Histones H3 and H4 are components of upstream activation factor required for the high-level transcription of yeast rDNA by RNA polymerase I

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12 December 2020

Nucleolin is required for RNA polymerase I transcription in vivo

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12 December 2020

Genetic modification of heterochromatic association and nuclear organization in Drosophila.

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12 December 2020

SIR2 regulates recombination between different rDNA repeats, but not recombination within individual rRNA genes in yeast

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12 December 2020

The control of natural variation in cytosine methylation in Arabidopsis

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12 December 2020

hSIR2(SIRT1) functions as an NAD-dependent p53 deacetylase

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12 December 2020

An ARGONAUTE4-containing nuclear processing center colocalized with Cajal bodies in Arabidopsis thaliana.

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12 December 2020

The rDNA transcription machinery is assembled during mitosis in active NORs and absent in inactive NORs

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12 December 2020

Net1, a Sir2-associated nucleolar protein required for rDNA silencing and nucleolar integrity

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12 December 2020

Direct evidence for SIR2 modulation of chromatin structure in yeast rDNA.

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12 December 2020

Oldies but goldies: searching for Christmas trees within the nucleolar architecture.

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12 December 2020

Emerging concepts of nucleolar assembly.

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12 December 2020

H2AX: the histone guardian of the genome

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12 December 2020

Positioning of NORs and NOR-bearing chromosomes in relation to nucleoli

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12 December 2020

Role of histone deacetylase Rpd3 in regulating rRNA gene transcription and nucleolar structure in yeast

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12 December 2020

Nuclear substructure and dynamics

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12 December 2020

Chromatin modifications and their function

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12 December 2020

Nucleolin: a multiFACeTed protein.

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12 December 2020

Temporal and spatial association of histone H2A variant hv1 with transcriptionally competent chromatin during nuclear development in Tetrahymena thermophila

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12 December 2020

Nucleolar adaptation in human cancer

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12 December 2020

Histone deacetylases and ASYMMETRIC LEAVES2 are involved in the establishment of polarity in leaves of Arabidopsis

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12 December 2020

The nucleolar architecture of polymerase I transcription and processing.

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12 December 2020

Down-regulation of a SILENT INFORMATION REGULATOR2-related histone deacetylase gene, OsSRT1, induces DNA fragmentation and cell death in rice.

1 reference

12 December 2020

DNase I sensitivity of ribosomal RNA genes in chromatin and nucleolar dominance in wheat

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12 December 2020

The nucleus: a highly organized but dynamic structure

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12 December 2020

Life on a planet of its own: regulation of RNA polymerase I transcription in the nucleolus

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12 December 2020

UBF binding in vivo is not restricted to regulatory sequences within the vertebrate ribosomal DNA repeat

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12 December 2020

The chromatin remodelling complex WSTF-SNF2h interacts with nuclear myosin 1 and has a role in RNA polymerase I transcription

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12 December 2020

The multifunctional nucleolus

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12 December 2020

Molecular mechanisms mediating methylation-dependent silencing of ribosomal gene transcription

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12 December 2020

Homologs of small nucleolar RNAs in Archaea

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12 December 2020

Internal organisation of the nucleus: assembly of compartments by macromolecular crowding and the nuclear matrix model

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12 December 2020

Epigenetic control of nuclear architecture

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12 December 2020

Nucleophosmin is selectively deposited on mRNA during polyadenylation

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12 December 2020

Net1 stimulates RNA polymerase I transcription and regulates nucleolar structure independently of controlling mitotic exit.

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12 December 2020

Chromatin turn ons and turn offs of ribosomal RNA genes

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12 December 2020

Parallel origins of the nucleosome core and eukaryotic transcription from Archaea

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12 December 2020

Evidence for nucleolus organizer regions as the units of regulation in nucleolar dominance in Arabidopsis thaliana interecotype hybrids

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12 December 2020

The Dynamics of Chromosome Organization and Gene Regulation

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12 December 2020

UBF activates RNA polymerase I transcription by stimulating promoter escape.

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12 December 2020

A housekeeper with power of attorney: the rRNA genes in ribosome biogenesis

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12 December 2020

The nucleolus: an organelle formed by the act of building a ribosome.

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12 December 2020

Gene dosage and stochastic effects determine the severity and direction of uniparental ribosomal RNA gene silencing (nucleolar dominance) in Arabidopsis allopolyploids

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12 December 2020

Histone macroH2A1 is concentrated in the inactive X chromosome of female preimplantation mouse embryos

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12 December 2020

The human Sir2 ortholog, SIRT2, is an NAD+-dependent tubulin deacetylase

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12 December 2020

Regulation of cytosine methylation in ribosomal DNA and nucleolus organizer expression in wheat

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12 December 2020

A decade of histone acetylation: marking eukaryotic chromosomes with specific codes

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12 December 2020

Sir2 represses endogenous polymerase II transcription units in the ribosomal DNA nontranscribed spacer

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12 December 2020

The diverse functions of histone lysine methylation

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12 December 2020

Nucleolin is a histone chaperone with FACT-like activity and assists remodeling of nucleosomes

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12 December 2020

Loss of rDNA methylation accompanies the onset of ribosomal gene activity in early development of X. laevis

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12 December 2020

Repression of gene expression by Arabidopsis HD2 histone deacetylases

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12 December 2020

Reduced levels of histone H3 acetylation on the inactive X chromosome in human females

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12 December 2020

Distinct roles for the essential MYST family HAT Esa1p in transcriptional silencing

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12 December 2020

Histone H4-K16 acetylation controls chromatin structure and protein interactions

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12 December 2020

A concerted DNA methylation/histone methylation switch regulates rRNA gene dosage control and nucleolar dominance

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12 December 2020

Upstream binding factor association induces large-scale chromatin decondensation

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12 December 2020

RNA viruses: hijacking the dynamic nucleolus

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12 December 2020

Chromatin-mediated regulation of nucleolar structure and RNA Pol I localization by TOR

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12 December 2020

The maize Single myb histone 1 gene, Smh1, belongs to a novel gene family and encodes a protein that binds telomere DNA repeats in vitro

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12 December 2020

Function of nucleophosmin/B23, a nucleolar acidic protein, as a histone chaperone

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12 December 2020

Molecular architecture of the amplified nucleoli of Xenopus oocytes.

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12 December 2020

Histone lysine trimethylation exhibits a distinct perinuclear distribution in Plzf-expressing spermatogonia.

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12 December 2020

Quantification of Ag-NOR proteins using Ag-NOR staining on western blots

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12 December 2020

Role of DNA methyltransferases in regulation of human ribosomal RNA gene transcription

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12 December 2020

New insights into the nucleophosmin/nucleoplasmin family of nuclear chaperones

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12 December 2020

Analysis of nucleolar protein dynamics reveals the nuclear degradation of ribosomal proteins

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12 December 2020

Erasure of histone acetylation by Arabidopsis HDA6 mediates large-scale gene silencing in nucleolar dominance

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12 December 2020

DNA methylation models histone acetylation

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12 December 2020

Genome restructuring in rye affects the expression, organization and disposition of homologous rDNA loci.

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12 December 2020

Recruitment of factors linking transcription and processing of pre-rRNA to NOR chromatin is UBF-dependent and occurs independent of transcription in human cells

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12 December 2020

H3K9 methylation and RNA interference regulate nucleolar organization and repeated DNA stability

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12 December 2020

Chromatin code, local non-equilibrium dynamics, and the emergence of transcription regulatory programs

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12 December 2020

Chromosomal histone modification patterns--from conservation to diversity

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12 December 2020

Nucleophosmin is essential for ribosomal protein L5 nuclear export

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12 December 2020

Psoralen-crosslinking of DNA as a probe for the structure of active nucleolar chromatin

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12 December 2020

Genetic variation in epigenetic inheritance of ribosomal RNA gene methylation in Arabidopsis

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12 December 2020

UBF-binding site arrays form pseudo-NORs and sequester the RNA polymerase I transcription machinery.

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12 December 2020

Expression and function of HD2-type histone deacetylases in Arabidopsis development

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12 December 2020

Comparative analysis of DNA methylation in tobacco heterochromatic sequences

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12 December 2020

10.1007/S00412-008-0184-2

Identifiers

DOI

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19 August 2017

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