(Q37351835)

19 August 2017

Polymorphisms in multiple genes contribute to the spontaneous mitochondrial genome instability of Saccharomyces cerevisiae S288C strains (English)

1 reference

19 August 2017

1 reference

Saccharomyces cerevisiae

1 reference

1 reference

Lazar N Dimitrov

1

1 reference

19 August 2017

Rachel B Brem

series ordinal

2

1 reference

19 August 2017

Leonid Kruglyak

series ordinal

3

1 reference

19 August 2017

Daniel E Gottschling

series ordinal

4

1 reference

19 August 2017

language of work or name

English

0 references

publication date

6 July 2009

1 reference

19 August 2017

19

1 reference

inferred from page(s)

published in

Genetics

1 reference

19 August 2017

183

1 reference

19 August 2017

1

1 reference

19 August 2017

365-383

1 reference

describes a project that uses

19 August 2017

ImageJ

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC2746160/fullTextXML

inferred from PubMed Central ID database lookup

cites work

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Computationally driven, quantitative experiments discover genes required for mitochondrial biogenesis

6 September 2017

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Population genomics of domestic and wild yeasts

6 September 2017

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Learning a prior on regulatory potential from eQTL data

6 September 2017

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Genetic architecture of complex traits: large phenotypic effects and pervasive epistasis

6 September 2017

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Dominant membrane uncoupling by mutant adenine nucleotide translocase in mitochondrial diseases

6 September 2017

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Tilting at quixotic trait loci (QTL): an evolutionary perspective on genetic causation

6 September 2017

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Identification and dissection of a complex DNA repair sensitivity phenotype in Baker's yeast

6 September 2017

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The molecular basis for relative physiological functionality of the ADP/ATP carrier isoforms in Saccharomyces cerevisiae

6 September 2017

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Integrating large-scale functional genomic data to dissect the complexity of yeast regulatory networks

6 September 2017

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Yeast mitochondria import ATP through the calcium-dependent ATP-Mg/Pi carrier Sal1p, and are ATP consumers during aerobic growth in glucose

6 September 2017

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Energetics of protein translocation into mitochondria

6 September 2017

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Pleiotropic effects of the yeast Sal1 and Aac2 carriers on mitochondrial function via an activity distinct from adenine nucleotide transport.

6 September 2017

1 reference

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Cell-to-cell stochastic variation in gene expression is a complex genetic trait.

6 September 2017

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Genome-wide association studies for complex traits: consensus, uncertainty and challenges

6 September 2017

1 reference

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Rare independent mutations in renal salt handling genes contribute to blood pressure variation

6 September 2017

1 reference

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ROS-generating mitochondrial DNA mutations can regulate tumor cell metastasis

6 September 2017

1 reference

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Maturation of iron-sulfur proteins in eukaryotes: mechanisms, connected processes, and diseases

6 September 2017

1 reference

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The biochemistry of heme biosynthesis

6 September 2017

1 reference

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Genetic basis of proteome variation in yeast

6 September 2017

1 reference

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A single nucleotide polymorphism in the DNA polymerase gamma gene of Saccharomyces cerevisiae laboratory strains is responsible for increased mitochondrial DNA mutability

6 September 2017

1 reference

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The evolution of gene expression QTL in Saccharomyces cerevisiae

6 September 2017

1 reference

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Genome-wide analysis of nucleotide-level variation in commonly used Saccharomyces cerevisiae strains

6 September 2017

1 reference

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Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis

6 September 2017

1 reference

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Genetic complexity and quantitative trait loci mapping of yeast morphological traits

6 September 2017

1 reference

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A "silent" polymorphism in the MDR1 gene changes substrate specificity

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

High levels of mitochondrial DNA deletions in substantia nigra neurons in aging and Parkinson disease

6 September 2017

1 reference

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Complex genetic interactions in a quantitative trait locus

6 September 2017

1 reference

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The organization and inheritance of the mitochondrial genome

6 September 2017

1 reference

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Local regulatory variation in Saccharomyces cerevisiae

6 September 2017

1 reference

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Evidence for domesticated and wild populations of Saccharomyces cerevisiae

6 September 2017

1 reference

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Mitochondrial DNA polymerase gamma is essential for mammalian embryogenesis

6 September 2017

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Conservation and evolvability in regulatory networks: the evolution of ribosomal regulation in yeast

6 September 2017

1 reference

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Mitochondrial DNA mutations in human disease

6 September 2017

1 reference

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Longevity and lineages: toward the integrative biology of degenerative diseases in heart, muscle, and bone

6 September 2017

1 reference

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Mitochondria, oxidants, and aging

6 September 2017

1 reference

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The landscape of genetic complexity across 5,700 gene expression traits in yeast

6 September 2017

1 reference

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Multiple Rare Alleles Contribute to Low Plasma Levels of HDL Cholesterol

6 September 2017

1 reference

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Sal1p, a calcium-dependent carrier protein that suppresses an essential cellular function associated With the Aac2 isoform of ADP/ATP translocase in Saccharomyces cerevisiae

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

Genome evolution in yeasts

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

Premature ageing in mice expressing defective mitochondrial DNA polymerase

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

Site-specific genomic (SSG) and random domain-localized (RDL) mutagenesis in yeast

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

Posttranscriptional regulation of HO expression by the Mkt1-Pbp1 complex

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

The Ashbya gossypii Genome as a Tool for Mapping the Ancient Saccharomyces cerevisiae Genome

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

The proteome of Saccharomyces cerevisiae mitochondria

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

Reinvestigation of the Saccharomyces cerevisiae genome annotation by comparison to the genome of a related fungus: Ashbya gossypii

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

The genetic architecture necessary for transgressive segregation is common in both natural and domesticated populations

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

Finding Functional Features in Saccharomyces Genomes by Phylogenetic Footprinting

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

Yeast Models of Human Mitochondrial Diseases

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

Sequencing and comparison of yeast species to identify genes and regulatory elements

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

MtDNA mutations in aging and apoptosis

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

Mitochondria: releasing power for life and unleashing the machineries of death

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

Getting started with yeast

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

Genetic dissection of transcriptional regulation in budding yeast

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

The genome sequence of Schizosaccharomyces pombe

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

The yeast mitochondrial transport proteins: new sequences and consensus residues, lack of direct relation between consensus residues and transmembrane helices, expression patterns of the transport protein genes, and protein-protein interactions with other proteins.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

Maintenance and integrity of the mitochondrial genome: a plethora of nuclear genes in the budding yeast

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

Functional characterization of the S. cerevisiae genome by gene deletion and parallel analysis

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

Designer deletion strains derived from Saccharomyces cerevisiae S288C: a useful set of strains and plasmids for PCR-mediated gene disruption and other applications

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

Yeast Clk-1 homologue (Coq7/Cat5) is a mitochondrial protein in coenzyme Q synthesis

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

Saccharomyces cerevisiae S288C has a mutation in FLO8, a gene required for filamentous growth

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

A new efficient gene disruption cassette for repeated use in budding yeast

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

The COQ7 gene encodes a protein in saccharomyces cerevisiae necessary for ubiquinone biosynthesis

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

Empirical threshold values for quantitative trait mapping

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

A method to predict functional residues in proteins

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

Genome renewal: A new phenomenon revealed from a genetic study of 43 strains ofSaccharomyces cerevisiae derived from natural fermentation of grape musts

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

Construction of a genetic linkage map in man using restriction fragment length polymorphisms

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

Genealogy of principal strains of the yeast genetic stock center

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

5-Fluoroorotic acid as a selective agent in yeast molecular genetics

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

The protein kinase family: conserved features and deduced phylogeny of the catalytic domains

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

PET genes of Saccharomyces cerevisiae

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

A constant rate of spontaneous mutation in DNA-based microbes

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

Separate domains of KAR1 mediate distinct functions in mitosis and nuclear fusion

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

Replacement of chromosome segments with altered DNA sequences constructed in vitro

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

Lessons from a small, dispensable genome: the mitochondrial genome of yeast

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

The calcium-dependent ATP-Mg/Pi mitochondrial carrier is a target of glucose-induced calcium signalling in Saccharomyces cerevisiae

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

Excision sequences in the mitochondrial genome of yeast.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

A rapid miniprep method for the preparation of yeast mitochondrial DNA.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

The mitochondrial genome of wild-type yeast cells. VIII. The spontaneous cytoplasmic "petite" mutation

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

The biology of yeast mitochondrial introns

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

The nucleotide sequence of the mitochondrial genome of a spontaneous “petite” mutant of yeast

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

Genetic interactions between transcription factors cause natural variation in yeast

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

Genetic diversity in yeast assessed with whole-genome oligonucleotide arrays

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

Mitochondrial DNA deletions are abundant and cause functional impairment in aged human substantia nigra neurons.

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

Quantitative trait loci mapped to single-nucleotide resolution in yeast

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

Chromosomal translocations in yeast induced by low levels of DNA polymerase a model for chromosome fragile sites.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

Saccharomyces cerevisiae and Saccharomyces paradoxus coexist in a natural woodland site in North America and display different levels of reproductive isolation from European conspecifics

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

Induction of an unregulated channel by mutations in adenine nucleotide translocase suggests an explanation for human ophthalmoplegia

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

Dissecting the architecture of a quantitative trait locus in yeast

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

The origins of replication of the yeast mitochondrial genome and the phenomenon of suppressivity.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2746160

Trans-acting regulatory variation in Saccharomyces cerevisiae and the role of transcription factors

2 September 2018

1 reference

12 December 2020

The role of adenine nucleotide translocation in the energization of the inner membrane of mitochondria isolated from rho + and rho degree strains of Saccharomyces cerevisiae

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12 December 2020

An Age-Induced Switch to a Hyper-Recombinational State

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12 December 2020

Analysis of rho mutability in Saccharomyces cerevisiae. I. Effects of mmc and pet-ts alleles

1 reference

12 December 2020

On an unstable cell state in yeast

1 reference

12 December 2020

Ethidium bromide induced mutation of yeast mitochondria: complete transformation of cells into respiratory deficient non-chromosomal "petites"

1 reference

12 December 2020

Radiation-Induced Lethal Sectoring in Yeast

1 reference

12 December 2020

DNA deletions and clonal mutations drive premature aging in mitochondrial mutator mice

1 reference

12 December 2020

10.1534/GENETICS.109.104497

Identifiers

DOI

1 reference

release_mngxh3wawba75cnbeoqvrv6ura

19 August 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/mngxh3wawba75cnbeoqvrv6ura

24 November 2022

mapped directly with Wikidata item

1 reference

19 August 2017

PubMed publication ID

19581448

1 reference