(Q37377228)

20 August 2017

Mapping the sigma70 subunit contact sites on Escherichia coli RNA polymerase with a sigma70-conjugated chemical protease (English)

1 reference

20 August 2017

0 references

J T Owens

1

1 reference

20 August 2017

R Miyake

2

1 reference

20 August 2017

K Murakami

3

1 reference

20 August 2017

A J Chmura

4

1 reference

20 August 2017

N Fujita

5

1 reference

20 August 2017

A Ishihama

6

1 reference

20 August 2017

C F Meares

7

1 reference

20 August 2017

language of work or name

English

0 references

publication date

1 May 1998

1 reference

Proceedings of the National Academy of Sciences of the United States of America

20 August 2017

1 reference

20 August 2017

95

1 reference

20 August 2017

6021-6026

1 reference

20 August 2017

11

1 reference

Modular organization of the catalytic center of RNA polymerase

20 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27578

Mutations in the 1.1 subdomain of Escherichia coli sigma factor sigma70 and disruption of its overall structure

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27578

Domain organization of the Escherichia coli RNA polymerase sigma 70 subunit

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27578

Crystal structure of a sigma 70 subunit fragment from E. coli RNA polymerase

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27578

Binding of the sigma 70 protein to the core subunits of Escherichia coli RNA polymerase, studied by iron-EDTA protein footprinting

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27578

Topology of the RNA polymerase active center probed by chimeric rifampicin-nucleotide compounds

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27578

Assembly of functional Escherichia coli RNA polymerase containing beta subunit fragments

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27578

A single amino acid substitution in sigma E affects its ability to bind core RNA polymerase

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27578

PCR mutagenesis identifies a polymerase-binding sequence of sigma 54 that includes a sigma 70 homology region

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27578

Extensive homology among the largest subunits of eukaryotic and prokaryotic RNA polymerases

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27578

Prokaryotic and eukaryotic RNA polymerases have homologous core subunits

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27578

A mutant sigma 32 with a small deletion in conserved region 3 of sigma has reduced affinity for core RNA polymerase

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27578

The sigma 70 family: sequence conservation and evolutionary relationships

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27578

Structure and function of bacterial sigma factors

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27578

Genetics of bacterial RNA polymerases

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27578

Isolation, purification, and in vitro characterization of recessive-lethal-mutant RNA polymerases from Escherichia coli

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27578

Determination of the promoter strength in the mixed transcription system. II. Promoters of ribosomal RNA, ribosomal protein S1 and recA protein operons from Escherichia coli

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27578

Determination of the promoter strength in the mixed transcription system: promoters of lactose, tryplophan and ribosomal protein L10 operons fromExcherichia Coli

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27578

The regulation of transcription initiation in bacteria

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27578

Subunit topography of RNA polymerase from Escherichia coli. A cross-linking study with bifunctional reagents

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27578

A study of the quaternary structure of Escherichia coli RNA polymerase using bis(imido esters)

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27578

Sigma domain structure: one down, one to go.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27578

Determinants for Escherichia coli RNA polymerase assembly within the beta subunit.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27578

Mapping of catalytic residues in the RNA polymerase active center

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27578

The sigma subunit conserved region 3 is part of "5'-face" of active center of Escherichia coli RNA polymerase

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27578

Termination-altering amino acid substitutions in the beta' subunit of Escherichia coli RNA polymerase identify regions involved in RNA chain elongation

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27578

The beta subunit Rif-cluster I is only angstroms away from the active center of Escherichia coli RNA polymerase.

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27578

Factor Stimulating Transcription by RNA Polymerase

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27578

Subunits of RNA polymerase in function and structure; Maturation in vitro of core enzyme from Escherichia coli.

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27578

Promoter selectivity of Escherichia coli RNA polymerase. Purification and properties of holoenzyme containing the heat-shock sigma subunit.

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27578

Genetic studies on the beta subunit of Escherichia coli RNA polymerase. IX. The role of the carboxy-terminus in enzyme assembly.

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27578

A general method for introducing a series of mutations into cloned DNA using the polymerase chain reaction

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27578

Three-dimensional structure of E. coli core RNA polymerase: promoter binding and elongation conformations of the enzyme.

26 June 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.95.11.6021

Use of aryl azide cross-linkers to investigate protein-protein interactions: an optimization of important conditions as applied to Escherichia coli RNA polymerase and localization of a sigma 70-alpha cross-link to the C-terminal region of alpha.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.95.11.6021

Promoter selectivity of Escherichia coli RNA polymerase E sigma 70 and E sigma 38 holoenzymes. Effect of DNA supercoiling.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.95.11.6021

Synthesis of the protein cutting reagent iron (S)-1-(p-bromoacetamidobenzyl)ethylenediaminetetraacetate and conjugation to cysteine side chains

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.95.11.6021

Dimeric association of Escherichia coli RNA polymerase alpha subunits, studied by cleavage of single-cysteine alpha subunits conjugated to iron-(S)-1-[p-(bromoacetamido)benzyl]ethylenediaminetetraacetate

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.95.11.6021

Genetic evidence for the interaction between cluster I and cluster III rifampicin resistant mutations.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.95.11.6021

Mapping the promoter DNA sites proximal to conserved regions of sigma 70 in an Escherichia coli RNA polymerase-lacUV5 open promoter complex

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27578

Rifampicin region revisited. New rifampicin-resistant and streptolydigin-resistant mutants in the beta subunit of Escherichia coli RNA polymerase.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27578

Four contiguous amino acids define the target for streptolydigin resistance in the beta subunit of Escherichia coli RNA polymerase.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27578

Cyclic Re-use of the RNA Polymerase Sigma Factor

2 September 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.95.11.6021

DNA-dependent RNA polymerase from E. coli: studies on the role of sigma in chain initiation

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.95.11.6021

Altered promoter recognition by mutant forms of the sigma 70 subunit of Escherichia coli RNA polymerase

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.95.11.6021

Characterization of the Escherichia coli transcription factor sigma 70: localization of a region involved in the interaction with core RNA polymerase

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.95.11.6021

Bipartite functional map of the E. coli RNA polymerase α subunit: Involvement of the C-terminal region in transcription activation by cAMP-CRP

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.95.11.6021

Studies of the functional topography of Escherichia coli RNA polymerase. A method for localization of the sites of affinity labelling

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.95.11.6021

Changes in conserved region 3 of Escherichia coli sigma 70 mediate ppGpp-dependent functions in vivo

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.95.11.6021

Use of in vitro protein synthesis from polymerase chain reaction-generated templates to study interaction of Escherichia coli transcription factors with core RNA polymerase and for epitope mapping of monoclonal antibodies

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/9600910

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Specific Chemical Cleavage in High Yield at the Amino Peptide Bonds of Cysteine and Cystine Residues

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/9600910

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Molecular anatomy of the beta' subunit of the E. coli RNA polymerase: identification of regions involved in polymerase assembly

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/9600910

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.95.11.6021

1 reference

20 August 2017

0 references

1 reference

20 August 2017

1 reference