(Q37423751)

20 August 2017

Carbene footprinting accurately maps binding sites in protein-ligand and protein-protein interactions (English)

1 reference

protein-protein interaction

20 August 2017

1 reference

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27848959%20AND%20SRC:MED&resulttype=core&format=json

5 June 2020

Robert Layfield

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27848959%20AND%20SRC:MED&resulttype=core&format=json

5 June 2020

John E Moses

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27848959%20AND%20SRC:MED&resulttype=core&format=json

5 June 2020

Neil J Oldham

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27848959%20AND%20SRC:MED&resulttype=core&format=json

5 June 2020

author name string

Lucio Manzi

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27848959%20AND%20SRC:MED&resulttype=core&format=json

5 June 2020

Daniel Scott

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27848959%20AND%20SRC:MED&resulttype=core&format=json

5 June 2020

Timothy G Wright

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27848959%20AND%20SRC:MED&resulttype=core&format=json

5 June 2020

language of work or name

English

0 references

publication date

16 November 2016

1 reference

20 August 2017

Nature Communications

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27848959%20AND%20SRC:MED&resulttype=core&format=json

5 June 2020

volume

7

1 reference

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5 June 2020

page(s)

13288

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Creative Commons Attribution 4.0 International

5 June 2020

copyright license

start time

16 November 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

ImageJ

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC5116083/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

exact match

https://scigraph.springernature.com/pub.10.1038/ncomms13288

0 references

cites work

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Solvent mimicry with methylene carbene to probe protein topography

23 August 2017

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Using hydroxyl radical footprinting to explore the free energy landscape of protein folding.

23 August 2017

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Protein painting reveals solvent-excluded drug targets hidden within native protein-protein interfaces.

23 August 2017

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Mass spectrometry methods for studying structure and dynamics of biological macromolecules

23 August 2017

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Peptide-column interactions and their influence on back exchange rates in hydrogen/deuterium exchange-MS.

23 August 2017

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NIH Image to ImageJ: 25 years of image analysis

23 August 2017

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New protein footprinting: fast photochemical iodination combined with top-down and bottom-up mass spectrometry

23 August 2017

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Mass spectrometry: come of age for structural and dynamical biology.

23 August 2017

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Mass spectrometry of laser-initiated carbene reactions for protein topographic analysis

23 August 2017

1 reference

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Hydrogen exchange mass spectrometry for studying protein structure and dynamics

23 August 2017

1 reference

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Reconstitution of the RIG-I pathway reveals a signaling role of unanchored polyubiquitin chains in innate immunity

23 August 2017

1 reference

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Direct activation of protein kinases by unanchored polyubiquitin chains

23 August 2017

1 reference

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Molecular discrimination of structurally equivalent Lys 63-linked and linear polyubiquitin chains

23 August 2017

1 reference

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Suppression of the deubiquitinating enzyme USP5 causes the accumulation of unanchored polyubiquitin and the activation of p53

23 August 2017

1 reference

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Probing protein structure by amino acid-specific covalent labeling and mass spectrometry.

23 August 2017

1 reference

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Native mass spectrometry: a bridge between interactomics and structural biology

23 August 2017

1 reference

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Protein structure determination by x-ray crystallography.

23 August 2017

1 reference

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In-gel digestion for mass spectrometric characterization of proteins and proteomes

23 August 2017

1 reference

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Chemical cross-linking and mass spectrometry to map three-dimensional protein structures and protein-protein interactions.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5116083

Laser flash photolysis of hydrogen peroxide to oxidize protein solvent-accessible residues on the microsecond timescale.

23 August 2017

1 reference

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Nanosecond laser-induced photochemical oxidation method for protein surface mapping with mass spectrometry

23 August 2017

1 reference

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Network biology: understanding the cell's functional organization

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5116083

Methylene as a possible universal footprinting reagent that will include hydrophobic surface areas: overview and feasibility: properties of diazirine as a precursor

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5116083

Functional and structural role of a tryptophan generally observed in protein-carbohydrate interaction. TRP-62 of hen egg white lysozyme.

23 August 2017

1 reference

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3-Trifluoromethyl-3-phenyldiazirine. A new carbene generating group for photolabeling reagents

23 August 2017

1 reference

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Influence of inhibitor binding on the internal motions of lysozyme

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5116083

Hydroxyl radical "footprinting": high-resolution information about DNA-protein contacts and application to lambda repressor and Cro protein

23 August 2017

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Recognition of polyubiquitin isoforms by the multiple ubiquitin binding modules of isopeptidase T.

23 August 2017

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Electron capture dissociation of electrosprayed protein ions for spatially resolved hydrogen exchange measurements

14 September 2017

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Structural insights into interactions between ubiquitin specific protease 5 and its polyubiquitin substrates by mass spectrometry and ion mobility spectrometry

14 September 2017

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Ion mobility-mass spectrometry reveals conformational flexibility in the deubiquitinating enzyme USP5.

26 June 2018

1 reference

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Hydrogen/deuterium scrambling during quadrupole time-of-flight MS/MS analysis of a zinc-binding protein domain.

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5116083

High-resolution mapping of carbene-based protein footprints

26 June 2018

1 reference

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Two ZnF-UBP domains in isopeptidase T (USP5).

2 September 2018

1 reference

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[22] Time-resolved synchrotron X-ray footprinting and its application to RNA folding

2 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNCOMMS13288

Fast photochemical oxidation of proteins and mass spectrometry follow submillisecond protein folding at the amino-acid level

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNCOMMS13288

21 January 2018

Identifiers

DOI

10.1038/NCOMMS13288

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27848959%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

5 June 2020

ADS bibcode

2016NatCo...713288M

0 references

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27848959%20AND%20SRC:MED&resulttype=core&format=json

5 June 2020

PubMed publication ID

27848959

1 reference