(Q37584186)

21 August 2017

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title

Chapter 1. Regulation of HIV-1 alternative RNA splicing and its role in virus replication (English)

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21 August 2017

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C Martin Stoltzfus

1

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21 August 2017

1 January 2009

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Advances in Virus Research

21 August 2017

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21 August 2017

74

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21 August 2017

1-40

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RNA structure modulates splicing efficiency at the human immunodeficiency virus type 1 major splice donor

21 August 2017

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https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Production of acquired immunodeficiency syndrome-associated retrovirus in human and nonhuman cells transfected with an infectious molecular clone

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https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Mutations of RNA and protein sequences involved in human immunodeficiency virus type 1 packaging result in production of noninfectious virus

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Presence of negative and positive cis-acting RNA splicing elements within and flanking the first tat coding exon of human immunodeficiency virus type 1

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Presence of exon splicing silencers within human immunodeficiency virus type 1 tat exon 2 and tat-rev exon 3: evidence for inhibition mediated by cellular factors

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Insights into the selective activation of alternatively used splice acceptors by the human immunodeficiency virus type-1 bidirectional splicing enhancer

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Poly(A) site selection in the HIV-1 provirus: inhibition of promoter-proximal polyadenylation by the downstream major splice donor site

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

The HIV-1 5' LTR poly(A) site is inactivated by U1 snRNP interaction with the downstream major splice donor site.

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Stem-loop 1 of the U1 snRNP plays a critical role in the suppression of HIV-1 polyadenylation.

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https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Inhibition of HIV-1 multiplication by a modified U7 snRNA inducing Tat and Rev exon skipping

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https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Acetylated Tat regulates human immunodeficiency virus type 1 splicing through its interaction with the splicing regulator p32.

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https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

CDK13, a new potential human immunodeficiency virus type 1 inhibitory factor regulating viral mRNA splicing

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https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

RNA splicing at human immunodeficiency virus type 1 3' splice site A2 is regulated by binding of hnRNP A/B proteins to an exonic splicing silencer element

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https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Mechanisms of alternative pre-messenger RNA splicing

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https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Mutation of the major 5' splice site renders a CMV-driven HIV-1 proviral clone Tat-dependent: connections between transcription and splicing.

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Splicing of human immunodeficiency virus RNA is position-dependent suggesting sequential removal of introns from the 5' end

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Influence of RNA secondary structure on the pre-mRNA splicing process

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https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

RNA folding affects the recruitment of SR proteins by mouse and human polypurinic enhancer elements in the fibronectin EDA exon

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

SR proteins and hnRNP H regulate the splicing of the HIV-1 tev-specific exon 6D.

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https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

hnRNP A/B proteins are required for inhibition of HIV-1 pre-mRNA splicing

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https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

A bidirectional SF2/ASF- and SRp40-dependent splicing enhancer regulates human immunodeficiency virus type 1 rev, env, vpu, and nef gene expression

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https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Infection and replication of Tat- human immunodeficiency viruses: genetic analyses of LTR and tat mutations in primary and long-term human lymphoid cells

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Binding of hnRNP H to an exonic splicing silencer is involved in the regulation of alternative splicing of the rat beta-tropomyosin gene

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https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Nuclear mRNA export: insights from virology

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https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

hnRNP A1 controls HIV-1 mRNA splicing through cooperative binding to intron and exon splicing silencers in the context of a conserved secondary structure

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

The D1-A2 and D2-A2 pairs of splice sites from human immunodeficiency virus type 1 are highly efficient in vitro, in spite of an unusual branch site

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Human immunodeficiency virus type 1 Vpr links proteasomal degradation and checkpoint activation

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

hnRNP A1 recruited to an exon in vivo can function as an exon splicing silencer

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https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Human Immunodeficiency Virus Type 1 hnRNP A/B-Dependent Exonic Splicing Silencer ESSV Antagonizes Binding of U2AF65 to Viral Polypyrimidine Tracts

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

HIV-1 infection induces changes in expression of cellular splicing factors that regulate alternative viral splicing and virus production in macrophages

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Inefficient spliceosome assembly and abnormal branch site selection in splicing of an HIV-1 transcript in vitro

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https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Negative and positive mRNA splicing elements act competitively to regulate human immunodeficiency virus type 1 vif gene expression

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https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Utilization of host SR protein kinases and RNA-splicing machinery during viral replication

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https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

HIV-1 Vif, APOBEC, and intrinsic immunity

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Inhibition of human immunodeficiency virus replication by antisense oligodeoxynucleotides

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https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Sorting out the complexity of SR protein functions

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https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Biochemical and NMR study on the competition between proteins SC35, SRp40, and heterogeneous nuclear ribonucleoprotein A1 at the HIV-1 Tat exon 2 splicing site

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https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

A combinatorial code for splicing silencing: UAGG and GGGG motifs

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https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

U1 snRNP targets an essential splicing factor, U2AF65, to the 3' splice site by a network of interactions spanning the exon

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https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Role of cellular RNA processing factors in human immunodeficiency virus type 1 mRNA metabolism, replication, and infectivity

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https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

A second exon splicing silencer within human immunodeficiency virus type 1 tat exon 2 represses splicing of Tat mRNA and binds protein hnRNP H.

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Dual effect of the SR proteins ASF/SF2, SC35 and 9G8 on HIV-1 RNA splicing and virion production

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

The sequence complementarity between HIV-1 5' splice site SD4 and U1 snRNA determines the steady-state level of an unstable env pre-mRNA.

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https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

The strength of the HIV-1 3' splice sites affects Rev function.

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https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Promising nucleic acid analogs and mimics: characteristic features and applications of PNA, LNA, and morpholino

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https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Kinetics of expression of multiply spliced RNA in early human immunodeficiency virus type 1 infection of lymphocytes and monocytes

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https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Multiple links between transcription and splicing

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https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Influence of the small leader exons 2 and 3 on human immunodeficiency virus type 1 gene expression

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

A novel role for Vpr of human immunodeficiency virus type 1 as a regulator of the splicing of cellular pre-mRNA.

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

U1 small nuclear RNA plays a direct role in the formation of a rev-regulated human immunodeficiency virus env mRNA that remains unspliced

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https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Genetic analyses of conserved residues in the carboxyl-terminal domain of human immunodeficiency virus type 1 integrase

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

A novel splice donor site in the gag-pol gene is required for HIV-1 RNA stability

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

An exonic splicing silencer downstream of the 3' splice site A2 is required for efficient human immunodeficiency virus type 1 replication

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

A suboptimal 5' splice site downstream of HIV-1 splice site A1 is required for unspliced viral mRNA accumulation and efficient virus replication

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

The expression of the essential nuclear splicing factor SC35 is altered by human immunodeficiency virus infection

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Gag-processing defect of human immunodeficiency virus type 1 integrase E246 and G247 mutants is caused by activation of an overlapping 5' splice site

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Regulation of Vif mRNA splicing by human immunodeficiency virus type 1 requires 5' splice site D2 and an exonic splicing enhancer to counteract cellular restriction factor APOBEC3G

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

A Janus splicing regulatory element modulates HIV-1 tat and rev mRNA production by coordination of hnRNP A1 cooperative binding.

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Understanding alternative splicing: towards a cellular code

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https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Substrate specificities of SR proteins in constitutive splicing are determined by their RNA recognition motifs and composite pre-mRNA exonic elements

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Regulation of mRNA accumulation by a human immunodeficiency virus trans-activator protein

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Two strong 5' splice sites and competing, suboptimal 3' splice sites involved in alternative splicing of human immunodeficiency virus type 1 RNA.

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https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Functional integration of transcriptional and RNA processing machineries

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https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Induction of APOBEC3 family proteins, a defensive maneuver underlying interferon-induced anti-HIV-1 activity

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

The splicing factor-associated protein, p32, regulates RNA splicing by inhibiting ASF/SF2 RNA binding and phosphorylation

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

THE HIV-1 REV PROTEIN

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https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Positive and negative modulation of human immunodeficiency virus type 1 Rev function by cis and trans regulators of viral RNA splicing

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

P-TEFb, a cyclin-dependent kinase controlling elongation by RNA polymerase II

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Biological importance and cooperativity of HIV-1 regulatory gene splice acceptors

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Exon definition may facilitate splice site selection in RNAs with multiple exons

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Differential effects of the SR proteins 9G8, SC35, ASF/SF2, and SRp40 on the utilization of the A1 to A5 splicing sites of HIV-1 RNA

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Transcriptional regulation of APOBEC3G, a cytidine deaminase that hypermutates human immunodeficiency virus

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Identification and characterization of differentially expressed mRNAs in HIV type 1-infected human T cells.

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Role of RNA structure and protein factors in the control of HIV-1 splicing.

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

The origins of acquired immune deficiency syndrome viruses: where and when?

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Splicing efficiency of human immunodeficiency virus type 1 tat RNA is determined by both a suboptimal 3' splice site and a 10 nucleotide exon splicing silencer element located within tat exon 2.

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

The exon splicing silencer in human immunodeficiency virus type 1 Tat exon 3 is bipartite and acts early in spliceosome assembly

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Selectively reduced tat mRNA heralds the decline in productive human immunodeficiency virus type 1 infection in monocyte-derived macrophages

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https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Selective modification of alternative splicing by indole derivatives that target serine-arginine-rich protein splicing factors

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Identification of positive and negative splicing regulatory elements within the terminal tat-rev exon of human immunodeficiency virus type 1.

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Role of viral splicing elements and cellular RNA binding proteins in regulation of HIV-1 alternative RNA splicing

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Distinct patterns of cytokine regulation of APOBEC3G expression and activity in primary lymphocytes, macrophages, and dendritic cells

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Overlapping cis sites used for splicing of HIV-1 env/nef and rev mRNAs

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

SF2/ASF binds to a splicing enhancer in the third HIV-1 tat exon and stimulates U2AF binding independently of the RS domain.

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

In vitro interaction between human immunodeficiency virus type 1 Rev protein and splicing factor ASF/SF2-associated protein, p32

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Human immunodeficiency virus type 1 Vpr induces G2 checkpoint activation by interacting with the splicing factor SAP145

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Structure of tau exon 10 splicing regulatory element RNA and destabilization by mutations of frontotemporal dementia and parkinsonism linked to chromosome 17

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Splicing regulation: from a parts list of regulatory elements to an integrated splicing code

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

SC35 and heterogeneous nuclear ribonucleoprotein A/B proteins bind to a juxtaposed exonic splicing enhancer/exonic splicing silencer element to regulate HIV-1 tat exon 2 splicing

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https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Localization of HIV-1 RNA in mammalian nuclei

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https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Regulation of alternative RNA splicing by exon definition and exon sequences in viral and mammalian gene expression

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https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Human p32 protein relieves a post-transcriptional block to HIV replication in murine cells

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Exon Identity Established through Differential Antagonism between Exonic Splicing Silencer-Bound hnRNP A1 and Enhancer-Bound SR Proteins

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

A novel human immunodeficiency virus type 1 protein, tev, shares sequences with tat, env, and rev proteins

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Splicing regulatory elements within tat exon 2 of human immunodeficiency virus type 1 (HIV-1) are characteristic of group M but not group O HIV-1 strains.

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Temporal aspects of DNA and RNA synthesis during human immunodeficiency virus infection: evidence for differential gene expression

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https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Identification of a sequence required for efficient packaging of human immunodeficiency virus type 1 RNA into virions

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https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Cellular protein modulates effects of human immunodeficiency virus type 1 Rev

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Induction of human immunodeficiency virus type 1 expression in chronically infected cells is associated primarily with a shift in RNA splicing patterns.

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

Alternative splicing of human immunodeficiency virus type 1 mRNA modulates viral protein expression, replication, and infectivity.

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

A naturally arising mutation of a potential silencer of exon splicing in human immunodeficiency virus type 1 induces dominant aberrant splicing and arrests virus production

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2809%2974001-1

7 January 2021

10.1016/S0065-3527(09)74001-1

Identifiers

DOI

1 reference

21 August 2017

1 reference

PubMed ID

19698894