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A nuclear perspective on RNAi pathways in metazoans
scientific article published on 17 December 2013
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instance of
scholarly article
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stated in
Europe PubMed Central
PMCID
3951611
retrieved
21 August 2017
title
A nuclear perspective on RNAi pathways in metazoans
(English)
1 reference
stated in
Europe PubMed Central
PMCID
3951611
retrieved
21 August 2017
author
Germano Cecere
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMCID
3951611
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24361586%20AND%20SRC:MED&resulttype=core&format=json
retrieved
12 June 2020
author name string
Alla Grishok
series ordinal
2
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Europe PubMed Central
PMCID
3951611
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24361586%20AND%20SRC:MED&resulttype=core&format=json
retrieved
12 June 2020
language of work or name
English
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publication date
17 December 2013
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Europe PubMed Central
PMCID
3951611
retrieved
21 August 2017
published in
Biochimica et Biophysica Acta
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stated in
Europe PubMed Central
PMCID
3951611
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24361586%20AND%20SRC:MED&resulttype=core&format=json
retrieved
12 June 2020
volume
1839
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stated in
Europe PubMed Central
PMCID
3951611
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24361586%20AND%20SRC:MED&resulttype=core&format=json
retrieved
12 June 2020
issue
3
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stated in
Europe PubMed Central
PMCID
3951611
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24361586%20AND%20SRC:MED&resulttype=core&format=json
retrieved
12 June 2020
page(s)
223-233
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stated in
Europe PubMed Central
PMCID
3951611
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24361586%20AND%20SRC:MED&resulttype=core&format=json
retrieved
12 June 2020
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Collapse of Germline piRNAs in the Absence of Argonaute3 Reveals Somatic piRNAs in Flies
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A piRNA pathway primed by individual transposons is linked to de novo DNA methylation in mice
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Antisense transcripts are targets for activating small RNAs
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PRG-1 and 21U-RNAs interact to form the piRNA complex required for fertility in C. elegans
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23 August 2017
Piwi and piRNAs act upstream of an endogenous siRNA pathway to suppress Tc3 transposon mobility in the Caenorhabditis elegans germline
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23 August 2017
Two distinct mechanisms generate endogenous siRNAs from bidirectional transcription in Drosophila melanogaster
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23 August 2017
An endogenous small interfering RNA pathway in Drosophila
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23 August 2017
The Drosophila hairpin RNA pathway generates endogenous short interfering RNAs
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Pseudogene-derived small interfering RNAs regulate gene expression in mouse oocytes
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23 August 2017
Endogenous siRNAs from naturally formed dsRNAs regulate transcripts in mouse oocytes
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23 August 2017
Endogenous siRNAs derived from transposons and mRNAs in Drosophila somatic cells
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23 August 2017
DNA methylation of retrotransposon genes is regulated by Piwi family members MILI and MIWI2 in murine fetal testes
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The Piwi-piRNA pathway provides an adaptive defense in the transposon arms race
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Drosophila PIWI associates with chromatin and interacts directly with HP1a
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23 August 2017
Repeat-associated siRNAs cause chromatin silencing of retrotransposons in the Drosophila melanogaster germline
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Developmentally regulated piRNA clusters implicate MILI in transposon control
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23 August 2017
Discrete small RNA-generating loci as master regulators of transposon activity in Drosophila
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A slicer-mediated mechanism for repeat-associated siRNA 5' end formation in Drosophila
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Large-scale sequencing reveals 21U-RNAs and additional microRNAs and endogenous siRNAs in C. elegans
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23 August 2017
Heterochromatin revisited
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23 August 2017
H3K9 methylation and RNA interference regulate nucleolar organization and repeated DNA stability
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23 August 2017
RETRACTED: Secondary siRNAs result from unprimed RNA synthesis and form a distinct class
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23 August 2017
Distinct populations of primary and secondary effectors during RNAi in C. elegans
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23 August 2017
Small dsRNAs induce transcriptional activation in human cells
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PubMed Central
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23 August 2017
MIWI associates with translational machinery and PIWI-interacting RNAs (piRNAs) in regulating spermatogenesis
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PubMed Central
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23 August 2017
Involvement of AGO1 and AGO2 in mammalian transcriptional silencing
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23 August 2017
Argonaute-1 directs siRNA-mediated transcriptional gene silencing in human cells
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PubMed Central
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23 August 2017
A distinct small RNA pathway silences selfish genetic elements in the germline
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PubMed Central
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23 August 2017
A germline-specific class of small RNAs binds mammalian Piwi proteins
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retrieved
23 August 2017
Interacting endogenous and exogenous RNAi pathways in Caenorhabditis elegans
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3951611
retrieved
23 August 2017
Dicing and slicing: the core machinery of the RNA interference pathway
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3951611
retrieved
23 August 2017
Antisense transcription in the mammalian transcriptome
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3951611
retrieved
23 August 2017
The transcriptional landscape of the mammalian genome
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3951611
retrieved
23 August 2017
Drosophila argonaute-2 is required early in embryogenesis for the assembly of centric/centromeric heterochromatin, nuclear division, nuclear migration, and germ-cell formation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3951611
retrieved
23 August 2017
Transcriptional silencing of a transgene by RNAi in the soma of C. elegans
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3951611
retrieved
23 August 2017
Meiotic catastrophe and retrotransposon reactivation in male germ cells lacking Dnmt3L
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3951611
retrieved
23 August 2017
Small interfering RNA-induced transcriptional gene silencing in human cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3951611
retrieved
23 August 2017
MicroRNAs: small RNAs with a big role in gene regulation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3951611
retrieved
23 August 2017
Heterochromatic silencing and HP1 localization in Drosophila are dependent on the RNAi machinery
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3951611
retrieved
23 August 2017
Genetic regulatory mechanisms in the synthesis of proteins
2 references
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3951611
retrieved
23 August 2017
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3951611
retrieved
1 September 2018
MicroRNAs and other tiny endogenous RNAs in C. elegans
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3951611
retrieved
23 August 2017
The Argonaute family: tentacles that reach into RNAi, developmental control, stem cell maintenance, and tumorigenesis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3951611
retrieved
23 August 2017
Introduction of a Chimeric Chalcone Synthase Gene into Petunia Results in Reversible Co-Suppression of Homologous Genes in trans
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3951611
retrieved
23 August 2017
Double-stranded RNA-mediated silencing of genomic tandem repeats and transposable elements in the D. melanogaster germline
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3951611
retrieved
23 August 2017
piwi encodes a nucleoplasmic factor whose activity modulates the number and division rate of germline stem cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3951611
retrieved
23 August 2017
A novel class of evolutionarily conserved genes defined by piwi are essential for stem cell self-renewal
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3951611
retrieved
23 August 2017
Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3951611
retrieved
23 August 2017
Isolation of quelling-defective (qde) mutants impaired in posttranscriptional transgene-induced gene silencing in Neurospora crassa
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3951611
retrieved
23 August 2017
Cosuppression in Drosophila: gene silencing of Alcohol dehydrogenase by white-Adh transgenes is Polycomb dependent
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3951611
retrieved
23 August 2017
Position effect variegation and chromatin proteins
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3951611
retrieved
23 August 2017
Two new and distinct roles for Drosophila Argonaute-2 in the nucleus: alternative pre-mRNA splicing and transcriptional repression.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3951611
retrieved
6 September 2017
Roles of R2D2, a cytoplasmic D2 body component, in the endogenous siRNA pathway in Drosophila
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3951611
retrieved
6 September 2017
Promoter-associated small double-stranded RNA interacts with heterogeneous nuclear ribonucleoprotein A2/B1 to induce transcriptional activation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3951611
retrieved
6 September 2017
An Argonaute transports siRNAs from the cytoplasm to the nucleus.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3951611
retrieved
14 September 2017
Drosophila endogenous small RNAs bind to Argonaute 2 in somatic cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3951611
retrieved
14 September 2017
Suppression of gene expression by homologous transgenes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3951611
retrieved
14 September 2017
A major epigenetic programming mechanism guided by piRNAs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3951611
retrieved
25 June 2018
Human TNRC6A is an Argonaute-navigator protein for microRNA-mediated gene silencing in the nucleus
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3951611
retrieved
25 June 2018
Chromatin-associated RNA interference components contribute to transcriptional regulation in Drosophila
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3951611
retrieved
25 June 2018
Small regulatory RNAs inhibit RNA polymerase II during the elongation phase of transcription.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3951611
retrieved
25 June 2018
The Argonaute CSR-1 and its 22G-RNA cofactors are required for holocentric chromosome segregation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3951611
retrieved
25 June 2018
Distinct argonaute-mediated 22G-RNA pathways direct genome surveillance in the C. elegans germline
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3951611
retrieved
25 June 2018
Argonaute proteins couple chromatin silencing to alternative splicing.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3951611
retrieved
1 September 2018
Control of alternative splicing through siRNA-mediated transcriptional gene silencing.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3951611
retrieved
1 September 2018
In vitro analyses of the production and activity of secondary small interfering RNAs in C. elegans
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3951611
retrieved
1 September 2018
An epigenetic activation role of Piwi and a Piwi-associated piRNA in Drosophila melanogaster.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3951611
retrieved
1 September 2018
RNA interference machinery influences the nuclear organization of a chromatin insulator.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3951611
retrieved
1 September 2018
RNAi components are required for nuclear clustering of Polycomb group response elements.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3951611
retrieved
1 September 2018
The antisense strand of small interfering RNAs directs histone methylation and transcriptional gene silencing in human cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3951611
retrieved
1 September 2018
RNAi related mechanisms affect both transcriptional and posttranscriptional transgene silencing in Drosophila
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3951611
retrieved
1 September 2018
Flavonoid genes in petunia: addition of a limited number of gene copies may lead to a suppression of gene expression
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/24361586
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1016/J.BBAGRM.2013.11.009
1 reference
stated in
Europe PubMed Central
PMCID
3951611
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24361586%20AND%20SRC:MED&resulttype=core&format=json
retrieved
12 June 2020
PMCID
3951611
1 reference
stated in
Europe PubMed Central
PMCID
3951611
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24361586%20AND%20SRC:MED&resulttype=core&format=json
retrieved
12 June 2020
PubMed ID
24361586
1 reference
stated in
Europe PubMed Central
PMCID
3951611
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24361586%20AND%20SRC:MED&resulttype=core&format=json
retrieved
12 June 2020
ResearchGate publication ID
259448303
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