(Q37655634)

21 August 2017

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title

Computational approaches for microRNA studies: a review (English)

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21 August 2017

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Li Li

1

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21 August 2017

Jianzhen Xu

2

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21 August 2017

Deyin Yang

3

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21 August 2017

Xiaorong Tan

4

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21 August 2017

Hongfei Wang

5

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21 August 2017

15 December 2009

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21 August 2017

12

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inferred from page(s)

published in

Mammalian Genome

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21 August 2017

21

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21 August 2017

1-12

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21 August 2017

1-2

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https://scigraph.springernature.com/pub.10.1007/s00335-009-9241-2

21 August 2017

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Target mRNAs are repressed as efficiently by microRNA-binding sites in the 5' UTR as in the 3' UTR

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12 December 2020

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Microarray analysis shows that some microRNAs downregulate large numbers of target mRNAs

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Mechanisms of post-transcriptional regulation by microRNAs: are the answers in sight?

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Tandem array-based expression screens identify host mRNA targets of virus-encoded microRNAs

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12 December 2020

Identification of clustered microRNAs using an ab initio prediction method

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A search for conserved sequences in coding regions reveals that the let-7 microRNA targets Dicer within its coding sequence

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12 December 2020

MicroRNAs regulate brain morphogenesis in zebrafish

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12 December 2020

Principles and limitations of computational microRNA gene and target finding

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Genomic analysis of human microRNA transcripts

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Characterization and identification of microRNA core promoters in four model species

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12 December 2020

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12 December 2020

MicroRNA identification based on sequence and structure alignment

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12 December 2020

MicroRNA-directed transcriptional gene silencing in mammalian cells

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12 December 2020

MicroRNAs and viral infection

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12 December 2020

Clustered microRNAs' coordination in regulating protein-protein interaction network

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12 December 2020

The role of site accessibility in microRNA target recognition

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12 December 2020

Fast and effective prediction of microRNA/target duplexes

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12 December 2020

ProMiR II: a web server for the probabilistic prediction of clustered, nonclustered, conserved and nonconserved microRNAs

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12 December 2020

MicroRNA-373 induces expression of genes with complementary promoter sequences

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12 December 2020

Combinatorial microRNA target predictions

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12 December 2020

miRanalyzer: a microRNA detection and analysis tool for next-generation sequencing experiments

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12 December 2020

Widespread changes in protein synthesis induced by microRNAs

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12 December 2020

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12 December 2020

Naïve Bayes for microRNA target predictions--machine learning for microRNA targets.

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12 December 2020

Hairpins in a Haystack: recognizing microRNA precursors in comparative genomics data

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MicroRNAs 17-5p-20a-106a control monocytopoiesis through AML1 targeting and M-CSF receptor upregulation

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12 December 2020

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12 December 2020

The impact of microRNAs on protein output

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12 December 2020

Potent effect of target structure on microRNA function.

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12 December 2020

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12 December 2020

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12 December 2020

Using expression profiling data to identify human microRNA targets

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12 December 2020

Human microRNAs are processed from capped, polyadenylated transcripts that can also function as mRNAs

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12 December 2020

Limitations and possibilities of small RNA digital gene expression profiling.

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12 December 2020

RNA polymerase III transcribes human microRNAs

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12 December 2020

MicroRNAs: genomics, biogenesis, mechanism, and function

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12 December 2020

Connecting microRNA genes to the core transcriptional regulatory circuitry of embryonic stem cells

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12 December 2020

De novo SVM classification of precursor microRNAs from genomic pseudo hairpins using global and intrinsic folding measures.

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12 December 2020

A guide through present computational approaches for the identification of mammalian microRNA targets

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12 December 2020

Detecting microRNA binding and siRNA off-target effects from expression data

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12 December 2020

Augmentation of tumor angiogenesis by a Myc-activated microRNA cluster

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12 December 2020

Discovering microRNAs from deep sequencing data using miRDeep

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12 December 2020

Prediction of human miRNAs using tissue-selective motifs in 3' UTRs

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12 December 2020

The microRNAs of Caenorhabditis elegans

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12 December 2020

Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps

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12 December 2020

Serum response factor regulates a muscle-specific microRNA that targets Hand2 during cardiogenesis

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12 December 2020

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12 December 2020

Analysis of regulatory network topology reveals functionally distinct classes of microRNAs.

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12 December 2020

ViTa: prediction of host microRNAs targets on viruses

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12 December 2020

Classification of real and pseudo microRNA precursors using local structure-sequence features and support vector machine.

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12 December 2020

Intronic microRNA precursors that bypass Drosha processing

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12 December 2020

Mammalian mirtron genes

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12 December 2020

MicroRNAs to Nanog, Oct4 and Sox2 coding regions modulate embryonic stem cell differentiation

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12 December 2020

Identification of hundreds of conserved and nonconserved human microRNAs

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12 December 2020

Weighted sequence motifs as an improved seeding step in microRNA target prediction algorithms

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12 December 2020

Zebrafish MiR-430 promotes deadenylation and clearance of maternal mRNAs

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12 December 2020

Reliable prediction of Drosha processing sites improves microRNA gene prediction.

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12 December 2020

Chromatin structure analyses identify miRNA promoters

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12 December 2020

A pattern-based method for the identification of MicroRNA binding sites and their corresponding heteroduplexes

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12 December 2020

A C. elegans genome-scale microRNA network contains composite feedback motifs with high flux capacity.

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12 December 2020

A Genome-Wide Map of Conserved MicroRNA Targets in C. elegans

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12 December 2020

A computational screen for mouse signaling pathways targeted by microRNA clusters.

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12 December 2020

Prediction of microRNA targets

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12 December 2020

The regulatory activity of microRNA* species has substantial influence on microRNA and 3' UTR evolution

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12 December 2020

Prediction and identification of herpes simplex virus 1-encoded microRNAs

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12 December 2020

miTarget: microRNA target gene prediction using a support vector machine

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12 December 2020

Global identification of microRNA-target RNA pairs by parallel analysis of RNA ends

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12 December 2020

MicroRNA targets in Drosophila

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12 December 2020

MiRFinder: an improved approach and software implementation for genome-wide fast microRNA precursor scans

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12 December 2020

A hexanucleotide element directs microRNA nuclear import.

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12 December 2020

A combined computational-experimental approach predicts human microRNA targets

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12 December 2020

Microarray profiling of microRNAs reveals frequent coexpression with neighboring miRNAs and host genes

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12 December 2020

Vir-Mir db: prediction of viral microRNA candidate hairpins.

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12 December 2020

10.1007/S00335-009-9241-2

Identifiers

DOI

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21 August 2017

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