(Q37813036)

23 August 2017

1 reference

title

Physics of protein-DNA interactions: mechanisms of facilitated target search (English)

1 reference

23 August 2017

Physics of protein–DNA interactions: mechanisms of facilitated target search (English)

1 reference

4 September 2024

author name string

Anatoly B. Kolomeisky

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21113556

4 September 2024

language of work or name

English

0 references

publication date

29 November 2010

1 reference

full work available at URL

23 August 2017

http://pubs.rsc.org/en/content/articlepdf/2011/CP/C0CP01966F

1 reference

Physical Chemistry Chemical Physics

4 September 2024

published in

1 reference

23 August 2017

volume

13

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23 August 2017

issue

6

1 reference

23 August 2017

page(s)

2088-2095

1 reference

The lac repressor-operator interaction. 3. Kinetic studies

23 August 2017

cites work

1 reference

https://api.crossref.org/works/10.1039%2FC0CP01966F

Diffusion-driven mechanisms of protein translocation on nucleic acids. 1. Models and theory.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0CP01966F

Diffusion-controlled macromolecular interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0CP01966F

One- and three-dimensional pathways for proteins to reach specific DNA sites

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0CP01966F

How do site-specific DNA-binding proteins find their targets?

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0CP01966F

Measurement of the contributions of 1D and 3D pathways to the translocation of a protein along DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0CP01966F

NMR structural and kinetic characterization of a homeodomain diffusing and hopping on nonspecific DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0CP01966F

A base-excision DNA-repair protein finds intrahelical lesion bases by fast sliding in contact with DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0CP01966F

Probing transcription factor dynamics at the single-molecule level in a living cell

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0CP01966F

Visualizing one-dimensional diffusion of proteins along DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0CP01966F

Nonspecifically bound proteins spin while diffusing along DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0CP01966F

An end to 40 years of mistakes in DNA-protein association kinetics?

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0CP01966F

Tumor suppressor p53 slides on DNA with low friction and high stability

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0CP01966F

Diffusion of the restriction nuclease EcoRI along DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0CP01966F

Kinetics of protein-DNA interaction: facilitated target location in sequence-dependent potential

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0CP01966F

Diffusion in correlated random potentials, with applications to DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0CP01966F

Facilitated Diffusion of DNA-Binding Proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0CP01966F

How proteins search for their specific sites on DNA: the role of DNA conformation

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0CP01966F

A model for the mediation of processivity of DNA-targeting proteins by nonspecific binding: dependence on DNA length and presence of obstacles

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0CP01966F

Positively charged residues in DNA-binding domains of structural proteins follow sequence-specific positions of DNA phosphate groups.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0CP01966F

Physical constraints and functional characteristics of transcription factor-DNA interaction.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0CP01966F

Kinetics of target site localization of a protein on DNA: a stochastic approach.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0CP01966F

Quantifying hopping and jumping in facilitated diffusion of DNA-binding proteins.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0CP01966F

How gene order is influenced by the biophysics of transcription regulation

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0CP01966F

Facilitated DNA search by multidomain transcription factors: cross talk via a flexible linker

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0CP01966F

Dynamic strategies for target-site search by DNA-binding proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0CP01966F

The subdiffusive targeting problem

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0CP01966F

Target search of N sliding proteins on a DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0CP01966F

Sampling the cell with anomalous diffusion - the discovery of slowness

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0CP01966F

Charge-transport-mediated recruitment of DNA repair enzymes

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0CP01966F

Apparent directional scanning for DNA repair

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0CP01966F

A two-step nucleotide-flipping mechanism enables kinetic discrimination of DNA lesions by AGT

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0CP01966F

Using the bias from flow to elucidate single DNA repair protein sliding and interactions with DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0CP01966F

Fundamental aspects of protein-protein association kinetics

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0CP01966F

Enhancement of Association Rates by Nonspecific Binding to DNA and Cell Membranes

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC0CP01966F

Diffusion-driven mechanisms of protein translocation on nucleic acids. 2. The Escherichia coli lac repressor-operator interaction: equilibrium measurements

21 January 2018

5

1 reference

Salt dependence of the kinetics of the lac repressor-operator interaction: role of nonoperator deoxyribonucleic acid in the association reaction

4 September 2024

6

1 reference

Single molecule measurements of repressor protein 1D diffusion on DNA

4 September 2024

13

1 reference

Proceedings of the National Academy of Sciences of the United States of America

4 September 2024

16

105

157388

van der Broek

2005

1 reference

How does a protein search for the specific site on DNA: The role of disorder

4 September 2024

30

1 reference

Protein--DNA interactions: reaching and recognizing the targets

4 September 2024

33

1 reference

Facilitated search of proteins on DNA: correlations are important

4 September 2024

35

1 reference

Searching fast for a target on DNA without falling to traps

4 September 2024

39

1 reference

Protein sliding along DNA: dynamics and structural characterization

4 September 2024

41

1 reference

Comparison of kinetic and dynamical models of DNA-protein interaction and facilitated diffusion

4 September 2024

44

1 reference

Diffusion Constant of a Nonspecifically Bound Protein Undergoing Curvilinear Motion along DNA†

4 September 2024

54

1 reference

4 September 2024

Identifiers

DOI

10.1039/C0CP01966F

1 reference

23 August 2017

1 reference