(Q37830004)

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Proteogenomics

scientific article published on 18 January 2011

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scholarly article

1 reference

Europe PubMed Central

24 August 2017

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Europe PubMed Central

Proteogenomics. (English)

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Europe PubMed Central

24 August 2017

author name string

Santosh Renuse

1

1 reference

Europe PubMed Central

24 August 2017

Raghothama Chaerkady

2

1 reference

Europe PubMed Central

24 August 2017

Akhilesh Pandey

3

1 reference

Europe PubMed Central

24 August 2017

publication date

18 January 2011

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Europe PubMed Central

24 August 2017

1 reference

Europe PubMed Central

24 August 2017

11

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Europe PubMed Central

24 August 2017

620-630

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Europe PubMed Central

24 August 2017

4

1 reference

Europe PubMed Central

24 August 2017

The Genomes On Line Database (GOLD) in 2009: status of genomic and metagenomic projects and their associated metadata

1 reference

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Protein annotation at genomic scale: the current status

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201000615

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Identifying protein-coding genes in genomic sequences

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201000615

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Proteomics to study genes and genomes

1 reference

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Nucleotide sequence databases: a gold mine for biologists

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Matching peptide mass spectra to EST and genomic DNA databases

1 reference

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Use of mass spectrometry-derived data to annotate nucleotide and protein sequence databases

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A proteomic analysis of human hemodialysis fluid.

1 reference

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Improving gene annotation using peptide mass spectrometry

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Integration with the human genome of peptide sequences obtained by high-throughput mass spectrometry

1 reference

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Novel gene and gene model detection using a whole genome open reading frame analysis in proteomics

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Use of shotgun proteomics for the identification, confirmation, and correction of C. elegans gene annotations

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Genome annotation of Anopheles gambiae using mass spectrometry-derived data.

1 reference

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A high-quality catalog of the Drosophila melanogaster proteome

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Linking genome and proteome by mass spectrometry: large-scale identification of yeast proteins from two dimensional gels

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Analysis of the Plasmodium falciparum proteome by high-accuracy mass spectrometry.

1 reference

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Proteogenomic mapping as a complementary method to perform genome annotation

1 reference

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21 January 2018

High accuracy mass spectrometry analysis as a tool to verify and improve gene annotation using Mycobacterium tuberculosis as an example

1 reference

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Comparative proteogenomics: combining mass spectrometry and comparative genomics to analyze multiple genomes

1 reference

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The proteome of Toxoplasma gondii: integration with the genome provides novel insights into gene expression and annotation

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Proteogenomics of Pristionchus pacificus reveals distinct proteome structure of nematode models

1 reference

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Genome-scale proteomics reveals Arabidopsis thaliana gene models and proteome dynamics.

1 reference

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Computational prediction of eukaryotic protein-coding genes

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201000615

21 January 2018

Missing genes in the annotation of prokaryotic genomes

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201000615

21 January 2018

Genome annotation assessment in Drosophila melanogaster

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201000615

21 January 2018

Precision proteomics: the case for high resolution and high mass accuracy

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201000615

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Enhancing identifications of lipid-embedded proteins by mass spectrometry for improved mapping of endothelial plasma membranes in vivo

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201000615

21 January 2018

O Labeling for a Quantitative Proteomic Analysis of Glycoproteins in Hepatocellular Carcinoma.

1 reference

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21 January 2018

Phosphoproteomics in cancer

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201000615

21 January 2018

Probability-based protein identification by searching sequence databases using mass spectrometry data

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201000615

21 January 2018

An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201000615

21 January 2018

InsPecT: identification of posttranslationally modified peptides from tandem mass spectra

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201000615

21 January 2018

Open mass spectrometry search algorithm

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201000615

21 January 2018

N-terminal acetyltransferases and sequence requirements for N-terminal acetylation of eukaryotic proteins

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201000615

21 January 2018

Discovery and revision of Arabidopsis genes by proteogenomics

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201000615

21 January 2018

Charting the proteomes of organisms with unsequenced genomes by MALDI-quadrupole time-of-flight mass spectrometry and BLAST homology searching

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201000615

21 January 2018

Strategic proteome analysis of Candida magnoliae with an unsequenced genome

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201000615

21 January 2018

Expanding the organismal scope of proteomics: cross-species protein identification by mass spectrometry and its implications

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201000615

21 January 2018

A map of human genome sequence variation containing 1.42 million single nucleotide polymorphisms

1 reference

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21 January 2018

Genetic variation, classification and 'race'

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201000615

21 January 2018

The diploid genome sequence of an individual human

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201000615

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Mutation-tolerant protein identification by mass spectrometry

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201000615

21 January 2018

Induced chromosomal proximity and gene fusions in prostate cancer

1 reference

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21 January 2018

Algorithm for identification of fusion proteins via mass spectrometry.

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201000615

21 January 2018

Alternative splice variants, a new class of protein cancer biomarker candidates: findings in pancreatic cancer and breast cancer with systems biology implications

1 reference

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Identification of novel alternative splice isoforms of circulating proteins in a mouse model of human pancreatic cancer

1 reference

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21 January 2018

Proteomic characterization of novel alternative splice variant proteins in human epidermal growth factor receptor 2/neu-induced breast cancers

1 reference

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The complete genome sequence of Escherichia coli K-12

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Genome sequence of enterohaemorrhagic Escherichia coli O157:H7

1 reference

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21 January 2018

Identifiers

10.1002/PMIC.201000615

1 reference

Europe PubMed Central

24 August 2017

1 reference

Europe PubMed Central

24 August 2017

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