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Function, structure and mechanism of bacterial photosensory LOV proteins.
scientific article published on 08 August 2011
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Europe PubMed Central
PMC publication ID
3286519
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21822294%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 February 2020
review article
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Europe PubMed Central
title
Function, structure and mechanism of bacterial photosensory LOV proteins
(English)
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Europe PubMed Central
PMC publication ID
3286519
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21822294%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 February 2020
main subject
protein structure
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author
Julien Herrou
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1
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Europe PubMed Central
PMC publication ID
3286519
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21822294%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 February 2020
Sean Crosson
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2
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Europe PubMed Central
PMC publication ID
3286519
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21822294%20AND%20SRC:MED&resulttype=core&format=json
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9 February 2020
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Julien Herrou
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1
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3286519
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25 August 2017
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English
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publication date
8 August 2011
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3286519
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retrieved
9 February 2020
published in
Nature Reviews Microbiology
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PMC publication ID
3286519
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21822294%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 February 2020
volume
9
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Europe PubMed Central
PMC publication ID
3286519
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21822294%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 February 2020
issue
10
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Europe PubMed Central
PMC publication ID
3286519
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retrieved
9 February 2020
page(s)
713-723
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3286519
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9 February 2020
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Phototropism: a "simple" physiological response modulated by multiple interacting photosensory-response pathways.
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Blue-light photoreceptors in higher plants.
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LOV (light, oxygen, or voltage) domains of the blue-light photoreceptor phototropin (nph1): binding sites for the chromophore flavin mononucleotide.
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Arabidopsis NPH1: a flavoprotein with the properties of a photoreceptor for phototropism.
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HY4 gene of A. thaliana encodes a protein with characteristics of a blue-light photoreceptor
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6 September 2017
1.4 A structure of photoactive yellow protein, a cytosolic photoreceptor: unusual fold, active site, and chromophore
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
retrieved
6 September 2017
Phototaxis away from blue light by an Escherichia coli mutant accumulating protoporphyrin IX
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
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6 September 2017
Intrinsic and extrinsic light responses of Salmonella typhimurium and Escherichia coli
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
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6 September 2017
Bacterial cryptochrome and photolyase: characterization of two photolyase-like genes of Synechocystis sp. PCC6803
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
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6 September 2017
Role of the white collar 1 photoreceptor in carotenogenesis, UV resistance, hydrophobicity, and virulence of Fusarium oxysporum
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
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14 September 2017
Blue-light-activated histidine kinases: two-component sensors in bacteria.
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
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14 September 2017
Phot-LOV1: photocycle of a blue-light receptor domain from the green alga Chlamydomonas reinhardtii
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
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14 September 2017
Photocontrol of development by Stigmatella aurantiaca.
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
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14 September 2017
Progress in the chemistry and molecular biology of flavins and flavocoenzymes
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
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14 September 2017
Light-induced inhibition of sporulation in Bacillus licheniformis
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
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14 September 2017
Estimation of the available free energy in a LOV2-J alpha photoswitch
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
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28 September 2017
Signal transduction schemes of bacteria
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
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28 September 2017
Virulence differences in mice of type A and B Histoplasma capsulatum yeasts grown in continuous light and total darkness
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
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28 September 2017
Rationally improving LOV domain-based photoswitches
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
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23 June 2018
Distribution and phylogeny of light-oxygen-voltage-blue-light-signaling proteins in the three kingdoms of life
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
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23 June 2018
In vivo mutational analysis of YtvA from Bacillus subtilis: mechanism of light activation of the general stress response
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
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23 June 2018
Light signal transduction pathway from flavin chromophore to the J alpha helix of Arabidopsis phototropin1.
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
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23 June 2018
Design and signaling mechanism of light-regulated histidine kinases
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
retrieved
23 June 2018
A conserved glutamine plays a central role in LOV domain signal transmission and its duration
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
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23 June 2018
Surface sites for engineering allosteric control in proteins
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
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23 June 2018
The phot LOV2 domain and its interaction with LOV1.
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
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23 June 2018
ZEITLUPE encodes a novel clock-associated PAS protein from Arabidopsis
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
retrieved
23 June 2018
Putative blue-light photoreceptors from Arabidopsis thaliana and Sinapis alba with a high degree of sequence homology to DNA photolyase contain the two photolyase cofactors but lack DNA repair activity.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
retrieved
23 June 2018
Modulation of the photocycle of a LOV domain photoreceptor by the hydrogen-bonding network.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
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1 September 2018
On the binding of BODIPY-GTP by the photosensory protein YtvA from the common soil bacterium Bacillus subtilis.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
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1 September 2018
Chromophore exchange in the blue light-sensitive photoreceptor YtvA from Bacillus subtilis.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
retrieved
1 September 2018
The switch that does not flip: the blue-light receptor YtvA from Bacillus subtilis adopts an elongated dimer conformation independent of the activation state as revealed by a combined AUC and SAXS study.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
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1 September 2018
Addition at the molecular level: signal integration in designed Per-ARNT-Sim receptor proteins
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
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1 September 2018
A blue light-inducible phosphodiesterase activity in the cyanobacterium Synechococcus elongatus
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
retrieved
1 September 2018
Interdomain signalling in the blue-light sensing and GTP-binding protein YtvA: a mutagenesis study uncovering the importance of specific protein sites
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
retrieved
1 September 2018
Blue light induces global and localized conformational changes in the kinase domain of full-length phototropin
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
retrieved
1 September 2018
Red light activates the sigmaB-mediated general stress response of Bacillus subtilis via the energy branch of the upstream signaling cascade
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
retrieved
1 September 2018
Phototropin receptor kinase activation by blue light.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
retrieved
1 September 2018
Different role of the Jalpha helix in the light-induced activation of the LOV2 domains in various phototropins.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
retrieved
1 September 2018
Conformational heterogeneity and propagation of structural changes in the LOV2/Jalpha domain from Avena sativa phototropin 1 as recorded by temperature-dependent FTIR spectroscopy
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
retrieved
1 September 2018
Steric interactions stabilize the signaling state of the LOV2 domain of phototropin 1.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
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1 September 2018
NTP-binding properties of the blue-light receptor YtvA and effects of the E105L mutation.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
retrieved
1 September 2018
A base-catalyzed mechanism for dark state recovery in the Avena sativa phototropin-1 LOV2 domain.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
retrieved
1 September 2018
Conformational analysis of the blue-light sensing protein YtvA reveals a competitive interface for LOV-LOV dimerization and interdomain interactions.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
retrieved
1 September 2018
Blue news: NTP binding properties of the blue-light sensitive YtvA protein from Bacillus subtilis.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
retrieved
1 September 2018
Crystal structure and interactions of the PAS repeat region of the Drosophila clock protein PERIOD.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
retrieved
1 September 2018
Dimerization of the plant photoreceptor phototropin is probably mediated by the LOV1 domain
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
retrieved
1 September 2018
Role of Gln1029 in the photoactivation processes of the LOV2 domain in adiantum phytochrome3.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
retrieved
1 September 2018
Functional variations among LOV domains as revealed by FT-IR difference spectroscopy
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
retrieved
1 September 2018
Conformational changes in a photosensory LOV domain monitored by time-resolved NMR spectroscopy.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
retrieved
1 September 2018
Structural basis of a phototropin light switch.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
retrieved
1 September 2018
Light-induced structural changes in the LOV2 domain of Adiantum phytochrome3 studied by low-temperature FTIR and UV-visible spectroscopy.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
retrieved
1 September 2018
Phototropin LOV domains exhibit distinct roles in regulating photoreceptor function.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
retrieved
1 September 2018
The photocycle of a flavin-binding domain of the blue light photoreceptor phototropin.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
retrieved
1 September 2018
Photochemical and mutational analysis of the FMN-binding domains of the plant blue light receptor, phototropin.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
retrieved
1 September 2018
FKF1, a clock-controlled gene that regulates the transition to flowering in Arabidopsis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
retrieved
1 September 2018
Roles in dimerization and blue light photoresponse of the PAS and LOV domains of Neurospora crassa white collar proteins.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
retrieved
1 September 2018
Arabidopsis NPH1: a protein kinase with a putative redox-sensing domain.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
retrieved
1 September 2018
Association of flavin adenine dinucleotide with the Arabidopsis blue light receptor CRY1.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
retrieved
1 September 2018
MICROBIOLOGY: A Bacterial Pathogen Sees the Light
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286519
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3 December 2018
The STAS domain - a link between anion transporters and antisigma-factor antagonists
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1038%2FNRMICRO2622
retrieved
31 March 2020
Riboflavin, light, and the growth of plants
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1038%2FNRMICRO2622
retrieved
31 March 2020
Inactivation of Enzymes by Visible Light in the Presence of Riboflavin
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1038%2FNRMICRO2622
retrieved
31 March 2020
Identifiers
DOI
10.1038/NRMICRO2622
1 reference
stated in
Europe PubMed Central
PMC publication ID
3286519
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21822294%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 February 2020
PMC publication ID
3286519
1 reference
stated in
Europe PubMed Central
PMC publication ID
3286519
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21822294%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 February 2020
PubMed publication ID
21822294
1 reference
stated in
Europe PubMed Central
PMC publication ID
3286519
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21822294%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 February 2020
ResearchGate publication ID
51552748
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