(Q38082829)

28 August 2017

Analysis of metabolic flux using dynamic labelling and metabolic modelling (English)

1 reference

28 August 2017

A R Fernie

1

1 reference

PubMed ID

23421750

28 August 2017

J A Morgan

series ordinal

2

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28 August 2017

14 March 2013

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Plant, Cell and Environment

28 August 2017

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28 August 2017

36

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28 August 2017

9

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28 August 2017

1738-1750

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Compartment-specific labeling information in 13C metabolic flux analysis of plants.

28 August 2017

1 reference

The role of light in soybean seed filling metabolism

21 January 2018

1 reference

Isotope labelling of Rubisco subunits provides in vivo information on subcellular biosynthesis and exchange of amino acids between compartments

21 January 2018

1 reference

Central metabolic fluxes in the endosperm of developing maize seeds and their implications for metabolic engineering.

21 January 2018

1 reference

Elementary metabolite units (EMU): a novel framework for modeling isotopic distributions

21 January 2018

1 reference

Pathways of carbohydrate oxidation during thermogenesis by the spadix of Arum maculatum

21 January 2018

1 reference

Identification of the 2-hydroxyglutarate and isovaleryl-CoA dehydrogenases as alternative electron donors linking lysine catabolism to the electron transport chain of Arabidopsis mitochondria

21 January 2018

1 reference

Metabolic control and regulation of the tricarboxylic acid cycle in photosynthetic and heterotrophic plant tissues

21 January 2018

1 reference

Genome-scale proteomics reveals Arabidopsis thaliana gene models and proteome dynamics.

21 January 2018

1 reference

Carbocyclic fatty acids in plants: biochemical and molecular genetic characterization of cyclopropane fatty acid synthesis of Sterculiafoetida

21 January 2018

1 reference

Determination of metabolic fluxes in a non-steady-state system.

21 January 2018

1 reference

Understanding in vivo benzenoid metabolism in petunia petal tissue

21 January 2018

1 reference

From genomes to in silico cells via metabolic networks

21 January 2018

1 reference

Computation of metabolic fluxes and efficiencies for biological carbon dioxide fixation

21 January 2018

1 reference

Applications of mass isotopomer analysis to nutrition research

21 January 2018

1 reference

Insights into metabolic efficiency from flux analysis

21 January 2018

1 reference

Isotopomer analysis using GC-MS.

21 January 2018

1 reference

A kinetic model describes metabolic response to perturbations and distribution of flux control in the benzenoid network of Petunia hybrida

21 January 2018

1 reference

Use of carbon and energy balances in the study of the anaerobic metabolism of Enterobacter aerogenes at variable starting glucose concentrations

21 January 2018

1 reference

Stable isotope-assisted metabolomics for network-wide metabolic pathway elucidation

21 January 2018

1 reference

(-)-Menthol biosynthesis and molecular genetics.

21 January 2018

1 reference

The secondary metabolism of Arabidopsis thaliana: growing like a weed

21 January 2018

1 reference

Identification of genes in the phenylalanine metabolic pathway by ectopic expression of a MYB transcription factor in tomato fruit

21 January 2018

1 reference

AraGEM, a genome-scale reconstruction of the primary metabolic network in Arabidopsis

21 January 2018

1 reference

Contribution of malic enzyme, pyruvate kinase, phosphoenolpyruvate carboxylase, and the krebs cycle to respiration and biosynthesis and to intracellular pH regulation during hypoxia in maize root tips observed by nuclear magnetic resonance imaging a

21 January 2018

1 reference

Changes in flux pattern of the central carbohydrate metabolism during kernel development in maize

21 January 2018

1 reference

LC-NMR coupling technology: recent advancements and applications in natural products analysis

21 January 2018

1 reference

Dual labeling of metabolites for metabolome analysis (DLEMMA): A new approach for the identification and relative quantification of metabolites by means of dual isotope labeling and liquid chromatography-mass spectrometry

21 January 2018

1 reference

The future of metabolic phytochemistry: larger numbers of metabolites, higher resolution, greater understanding

21 January 2018

1 reference

Grand Challenges in Plant Systems Biology: Closing the Circle(s).

21 January 2018

1 reference

Fructose 2,6-bisphosphate activates pyrophosphate: fructose-6-phosphate 1-phosphotransferase and increases triose phosphate to hexose phosphate cycling in heterotrophic cells

21 January 2018

1 reference

Flux an important, but neglected, component of functional genomics

21 January 2018

1 reference

Quality control for plant metabolomics: reporting MSI-compliant studies

21 January 2018

1 reference

Metabolic flux profiling of Escherichia coli mutants in central carbon metabolism using GC-MS.

21 January 2018

1 reference

Acetate metabolism in cell suspension cultures.

21 January 2018

1 reference

A new route for synthesis of dimethylsulphoniopropionate in marine algae

21 January 2018

1 reference

Elemental formula annotation of polar and lipophilic metabolites using (13) C, (15) N and (34) S isotope labelling, in combination with high-resolution mass spectrometry.

21 January 2018

1 reference

Integration of metabolite with transcript and enzyme activity profiling during diurnal cycles in Arabidopsis rosettes

21 January 2018

1 reference

Enzymes of glycolysis are functionally associated with the mitochondrion in Arabidopsis cells.

21 January 2018

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Glycolytic enzymes associate dynamically with mitochondria in response to respiratory demand and support substrate channeling

21 January 2018

1 reference

Metabolic turnover analysis by a combination of in vivo 13C-labelling from 13CO2 and metabolic profiling with CE-MS/MS reveals rate-limiting steps of the C3 photosynthetic pathway in Nicotiana tabacum leaves

21 January 2018

1 reference

Metabolic network reconstruction and flux variability analysis of storage synthesis in developing oilseed rape (Brassica napus L.) embryos.

21 January 2018

1 reference

Single cell metabolomics.

21 January 2018

1 reference

Estimation of metabolic fluxes, expression levels and metabolite dynamics of a secondary metabolic pathway in potato using label pulse-feeding experiments combined with kinetic network modelling and simulation

21 January 2018

1 reference

Elucidation of cellular metabolism via metabolomics and stable-isotope assisted metabolomics

21 January 2018

1 reference

Matrix-free UV-laser desorption/ionization (LDI) mass spectrometric imaging at the single-cell level: distribution of secondary metabolites of Arabidopsis thaliana and Hypericum species

21 January 2018

1 reference

Plant peroxisomes: biogenesis and function

21 January 2018

1 reference

A survey of the Arabidopsis thaliana mitochondrial phosphoproteome

21 January 2018

1 reference

Metabolic flux maps comparing the effect of temperature on protein and oil biosynthesis in developing soybean cotyledons

21 January 2018

1 reference

NMR-based plant metabolomics: where do we stand, where do we go?

21 January 2018

1 reference

Metabolic flux analysis of a glycerol-overproducing Saccharomyces cerevisiae strain based on GC-MS, LC-MS and NMR-derived C-labelling data

21 January 2018

1 reference

Analysis of the compartmentalized metabolome - a validation of the non-aqueous fractionation technique

21 January 2018

1 reference

The metabolic network of Synechocystis sp. PCC 6803: systemic properties of autotrophic growth

21 January 2018

1 reference

The metabolism of C2 compounds in micro-organisms. I. The incorporation of [2-14C] acetate by Pseudomonas fluorescens, and by a Corynebacterium, grown on ammonium acetate

21 January 2018

1 reference

Krebs and his trinity of cycles

21 January 2018

1 reference

Bacterial adaptation through distributed sensing of metabolic fluxes

21 January 2018

1 reference

A topological map of the compartmentalized Arabidopsis thaliana leaf metabolome

21 January 2018

1 reference

High-resolution plant metabolomics: from mass spectral features to metabolites and from whole-cell analysis to subcellular metabolite distributions

21 January 2018

1 reference

Network flux analysis: impact of 13C-substrates on metabolism in Arabidopsis thaliana cell suspension cultures.

21 January 2018

1 reference

Shining light on signaling and metabolic networks by genetically encoded biosensors.

21 January 2018

1 reference

Mathematical modeling of monolignol biosynthesis in Populus xylem

21 January 2018

1 reference

Dynamic metabolic flux analysis (DMFA): a framework for determining fluxes at metabolic non-steady state.

21 January 2018

1 reference

RobiNA: a user-friendly, integrated software solution for RNA-Seq-based transcriptomics

21 January 2018

1 reference

Analysis of metabolic flux phenotypes for two Arabidopsis mutants with severe impairment in seed storage lipid synthesis

21 January 2018

1 reference

RNAi suppression of Arogenate Dehydratase1 reveals that phenylalanine is synthesized predominantly via the arogenate pathway in petunia petals.

21 January 2018

1 reference

Subcellular flux analysis of central metabolism in a heterotrophic Arabidopsis cell suspension using steady-state stable isotope labeling

21 January 2018

1 reference

Tissue- and cell-type specific transcriptome profiling of expanding tomato fruit provides insights into metabolic and regulatory specialization and cuticle formation

21 January 2018

1 reference

Metabolic flux analysis of the phenylpropanoid pathway in wound-healing potato tuber tissue using stable isotope-labeled tracer and LC-MS spectroscopy

21 January 2018

1 reference

Metabolic flux analysis of the phenylpropanoid pathway in elicitor-treated potato tuber tissue

21 January 2018

1 reference

Reconstruction of Arabidopsis metabolic network models accounting for subcellular compartmentalization and tissue-specificity

21 January 2018

1 reference

Metabolome analysis by capillary electrophoresis-mass spectrometry

21 January 2018

1 reference

Mathematical modeling of plant metabolic pathways

21 January 2018

1 reference

Quantification of metabolic flux in plant secondary metabolism by a biogenetic organizational approach

21 January 2018

1 reference

Linking high-resolution metabolic flux phenotypes and transcriptional regulation in yeast modulated by the global regulator Gcn4p

21 January 2018

1 reference

Experimental design principles for isotopically instationary 13C labeling experiments.

21 January 2018

1 reference

Metabolic flux analysis at ultra short time scale: isotopically non-stationary 13C labeling experiments.

21 January 2018

1 reference

Metabolic cartography: experimental quantification of metabolic fluxes from isotopic labelling studies

21 January 2018

1 reference

The use of metabolomics to dissect plant responses to abiotic stresses

21 January 2018

1 reference

Applications of metabolic modelling to plant metabolism

21 January 2018

1 reference

A genome-scale metabolic model of Arabidopsis and some of its properties

21 January 2018

1 reference

A functional genomics strategy that uses metabolome data to reveal the phenotype of silent mutations

21 January 2018

1 reference

Thirteen years of building constraint-based in silico models of Escherichia coli

21 January 2018

1 reference

Large-scale 13C-flux analysis reveals distinct transcriptional control of respiratory and fermentative metabolism in Escherichia coli

21 January 2018

1 reference

Experimental and mathematical approaches to modeling plant metabolic networks.

21 January 2018

1 reference

A systems biology approach identifies the biochemical mechanisms regulating monoterpenoid essential oil composition in peppermint

21 January 2018

1 reference

Mathematical modeling-guided evaluation of biochemical, developmental, environmental, and genotypic determinants of essential oil composition and yield in peppermint leaves

21 January 2018

1 reference

Kinetics of labelling of organic and amino acids in potato tubers by gas chromatography-mass spectrometry following incubation in (13)C labelled isotopes

21 January 2018

1 reference

The metabolic architecture of plant cells. Stability of central metabolism and flexibility of anabolic pathways during the growth cycle of tomato cells

21 January 2018

1 reference

Collisional fragmentation of central carbon metabolites in LC-MS/MS increases precision of ¹³C metabolic flux analysis

21 January 2018

1 reference

Metabolic flux analysis in Escherichia coli by integrating isotopic dynamic and isotopic stationary 13C labeling data

21 January 2018

1 reference

Plant metabolomics: towards biological function and mechanism

21 January 2018

1 reference

Quantitative analysis of metabolic fluxes in Escherichia coli, using two-dimensional NMR spectroscopy and complete isotopomer models.

21 January 2018

1 reference

A general definition of metabolic pathways useful for systematic organization and analysis of complex metabolic networks

21 January 2018

1 reference

Experimental flux measurements on a network scale

21 January 2018

1 reference

A flux model of glycolysis and the oxidative pentosephosphate pathway in developing Brassica napus embryos

21 January 2018

1 reference

Rubisco without the Calvin cycle improves the carbon efficiency of developing green seeds.

21 January 2018

1 reference

Understanding flux in plant metabolic networks

21 January 2018

1 reference

Software for dynamic analysis of tracer-based metabolomic data: estimation of metabolic fluxes and their statistical analysis

21 January 2018

1 reference

A transient isotopic labeling methodology for 13C metabolic flux analysis of photoautotrophic microorganisms.

21 January 2018

1 reference

Quantification of compartmented metabolic fluxes in developing soybean embryos by employing biosynthetically directed fractional (13)C labeling, two-dimensional [(13)C, (1)H] nuclear magnetic resonance, and comprehensive isotopomer balancing.

21 January 2018

1 reference

Starch as a major integrator in the regulation of plant growth

21 January 2018

1 reference

Single-cell metabolomics comes of age: new developments in mass spectrometry profiling and imaging.

21 January 2018

1 reference

The spatial organization of metabolism within the plant cell

21 January 2018

1 reference

Flux-balance modeling of plant metabolism.

21 January 2018

1 reference

Starch metabolism in tubers of transgenic potato (Solanum tuberosum) with increased ADPglucose pyrophosphorylase

21 January 2018

1 reference

Predictive metabolic engineering: a goal for systems biology.

21 January 2018

1 reference

Metabolic fluxes in an illuminated Arabidopsis rosette

21 January 2018

1 reference

Tomato aromatic amino acid decarboxylases participate in synthesis of the flavor volatiles 2-phenylethanol and 2-phenylacetaldehyde

21 January 2018

1 reference

From models to crop species: caveats and solutions for translational metabolomics

21 January 2018

1 reference

'Omics' analyses of regulatory networks in plant abiotic stress responses

21 January 2018

1 reference

Metabolic flux distributions in Corynebacterium glutamicum during growth and lysine overproduction

21 January 2018

1 reference

SlCCD7 controls strigolactone biosynthesis, shoot branching and mycorrhiza-induced apocarotenoid formation in tomato

21 January 2018

1 reference

Sampling the Arabidopsis transcriptome with massively parallel pyrosequencing.

21 January 2018

1 reference

The biosynthetic pathway of vitamin C in higher plants

21 January 2018

1 reference

13C metabolic flux analysis

21 January 2018

1 reference

Mechanistic pathway modeling for industrial biotechnology: challenging but worthwhile

21 January 2018

1 reference

Fluxomics: mass spectrometry versus quantitative imaging

21 January 2018

1 reference

Metabolic network fluxes in heterotrophic Arabidopsis cells: stability of the flux distribution under different oxygenation conditions

21 January 2018

1 reference

A genome-scale metabolic model accurately predicts fluxes in central carbon metabolism under stress conditions.

21 January 2018

1 reference

Integrating quantitative proteomics and metabolomics with a genome-scale metabolic network model

21 January 2018

1 reference

An elementary metabolite unit (EMU) based method of isotopically nonstationary flux analysis.

21 January 2018

1 reference

Mapping photoautotrophic metabolism with isotopically nonstationary (13)C flux analysis

21 January 2018

1 reference

Kinetic flux profiling for quantitation of cellular metabolic fluxes

21 January 2018

1 reference

13C metabolic flux analysis in complex systems.

21 January 2018

1 reference

FiatFlux--a software for metabolic flux analysis from 13C-glucose experiments

21 January 2018

1 reference

Isotopic non-stationary 13C gluconate tracer method for accurate determination of the pentose phosphate pathway split-ratio in Penicillium chrysogenum

21 January 2018

1 reference

Optimizing the distribution of resources between enzymes of carbon metabolism can dramatically increase photosynthetic rate: a numerical simulation using an evolutionary algorithm.

21 January 2018

1 reference

GC-EI-TOF-MS analysis of in vivo carbon-partitioning into soluble metabolite pools of higher plants by monitoring isotope dilution after 13CO2 labelling

21 January 2018

1 reference

Use of reverse-phase liquid chromatography, linked to tandem mass spectrometry, to profile the Calvin cycle and other metabolic intermediates in Arabidopsis rosettes at different carbon dioxide concentrations

21 January 2018

1 reference

High-resolution measurements in plant biology

21 January 2018

1 reference

21 January 2018

Silent genes given voice

1 reference

Occurrence of Fructose-l-phosphate in Tissues of Higher Plants

21 January 2018

1 reference

A Mechanism of Conversion of Fat to Carbohydrate in Castor Beans

21 January 2018

1 reference

Dynamic flux responses in riboflavin overproducing Bacillus subtilis to increasing glucose limitation in fed-batch culture

21 January 2018

1 reference

5 May 2024

https://opencitations.net/index/api/v1/citations/10.1002/BIT.22591

Identifiers

DOI

10.1111/PCE.12083

1 reference

release_yjssotaisbd6ri4iwmx7vvamou

28 August 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/yjssotaisbd6ri4iwmx7vvamou

mapped directly with Wikidata item

24 November 2022

based on heuristic

PubMed ID

23421750

1 reference

PubMed ID

23421750