(Q38131750)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23979992%20AND%20SRC:MED&resulttype=core&format=json

8 March 2020

title

Proteomics strategies to identify SUMO targets and acceptor sites: a survey of RNA-binding proteins SUMOylation (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23979992%20AND%20SRC:MED&resulttype=core&format=json

8 March 2020

1 reference

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23979992%20AND%20SRC:MED&resulttype=core&format=json

8 March 2020

Angela Bachi

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23979992%20AND%20SRC:MED&resulttype=core&format=json

8 March 2020

author name string

Silvia M L Barabino

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23979992%20AND%20SRC:MED&resulttype=core&format=json

8 March 2020

publication date

25 August 2013

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23979992%20AND%20SRC:MED&resulttype=core&format=json

8 March 2020

published in

NeuroMolecular Medicine

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23979992%20AND%20SRC:MED&resulttype=core&format=json

8 March 2020

volume

15

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23979992%20AND%20SRC:MED&resulttype=core&format=json

8 March 2020

issue

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23979992%20AND%20SRC:MED&resulttype=core&format=json

8 March 2020

page(s)

661-676

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23979992%20AND%20SRC:MED&resulttype=core&format=json

Next-generation proteomics: towards an integrative view of proteome dynamics.

8 March 2020

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In vivo identification of sumoylation sites by a signature tag and cysteine-targeted affinity purification

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A M55V polymorphism in a novel SUMO gene (SUMO-4) differentially activates heat shock transcription factors and is associated with susceptibility to type I diabetes mellitus

21 January 2018

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Purification and identification of endogenous polySUMO conjugates

21 January 2018

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SUMO-1 modification of Mdm2 prevents its self-ubiquitination and increases Mdm2 ability to ubiquitinate p53.

21 January 2018

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A novel approach to the analysis of SUMOylation with the independent use of trypsin and elastase digestion followed by database searching utilising consecutive residue addition to lysine.

21 January 2018

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CAJAL BODIES: A Long History of Discovery

21 January 2018

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Understanding the role of TDP-43 and FUS/TLS in ALS and beyond.

21 January 2018

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DNA damage-inducible SUMOylation of HERC2 promotes RNF8 binding via a novel SUMO-binding Zinc finger

21 January 2018

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SMAD proteins control DROSHA-mediated microRNA maturation

21 January 2018

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SUMO-1 modification alters ADAR1 editing activity

21 January 2018

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SUMO-1 modification of IkappaBalpha inhibits NF-kappaB activation

21 January 2018

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Identification of the enzyme required for activation of the small ubiquitin-like protein SUMO-1

21 January 2018

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Ubch9 conjugates SUMO but not ubiquitin

21 January 2018

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Quantitative proteomics for epigenetics.

21 January 2018

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Synaptonemal complex formation and meiotic checkpoint signaling are linked to the lateral element protein Red1.

21 January 2018

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Purification of a RAS-responsive adenylyl cyclase complex from Saccharomyces cerevisiae by use of an epitope addition method

21 January 2018

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SUMOylation of the mitochondrial fission protein Drp1 occurs at multiple nonconsensus sites within the B domain and is linked to its activity cycle

21 January 2018

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The SUMO system controls nucleolar partitioning of a novel mammalian ribosome biogenesis complex

21 January 2018

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Epstein-Barr virus noncoding RNAs are confined to the nucleus, whereas their partner, the human La protein, undergoes nucleocytoplasmic shuttling

21 January 2018

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A novel proteomics approach to identify SUMOylated proteins and their modification sites in human cells

21 January 2018

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Concepts in sumoylation: a decade on

21 January 2018

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RNA-binding proteins and post-transcriptional gene regulation

21 January 2018

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High-stringency tandem affinity purification of proteins conjugated to ubiquitin-like moieties

21 January 2018

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A functional variant of SUMO4, a new I kappa B alpha modifier, is associated with type 1 diabetes

21 January 2018

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The nucleolar SUMO-specific protease SENP3 reverses SUMO modification of nucleophosmin and is required for rRNA processing

21 January 2018

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Modification of the human thymine-DNA glycosylase by ubiquitin-like proteins facilitates enzymatic turnover

21 January 2018

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Specification of SUMO1- and SUMO2-interacting motifs

21 January 2018

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PDSM, a motif for phosphorylation-dependent SUMO modification

21 January 2018

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PhosphoSitePlus: a comprehensive resource for investigating the structure and function of experimentally determined post-translational modifications in man and mouse

21 January 2018

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"ChopNSpice," a mass spectrometric approach that allows identification of endogenous small ubiquitin-like modifier-conjugated peptides

21 January 2018

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SAM68 regulates neuronal activity-dependent alternative splicing of neurexin-1

21 January 2018

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Protein modification by SUMO

21 January 2018

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Ubc9p is the conjugating enzyme for the ubiquitin-like protein Smt3p

21 January 2018

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A misfolded but active dimer of bovine seminal ribonuclease.

21 January 2018

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The SUMO E3 ligase RanBP2 promotes modification of the HDAC4 deacetylase

21 January 2018

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Ubc9 sumoylation regulates SUMO target discrimination

21 January 2018

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A method of mapping protein sumoylation sites by mass spectrometry using a modified small ubiquitin-like modifier 1 (SUMO-1) and a computational program.

21 January 2018

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Targeted identification of SUMOylation sites in human proteins using affinity enrichment and paralog-specific reporter ions

21 January 2018

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TARDBP and FUS mutations associated with amyotrophic lateral sclerosis: summary and update

21 January 2018

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Role of SUMO-interacting motif in Daxx SUMO modification, subnuclear localization, and repression of sumoylated transcription factors

21 January 2018

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Molecular characterization of the SUMO-1 modification of RanGAP1 and its role in nuclear envelope association

21 January 2018

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SUMOylation regulates kainate-receptor-mediated synaptic transmission

21 January 2018

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Proteomics analysis of nucleolar SUMO-1 target proteins upon proteasome inhibition.

21 January 2018

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Site-specific identification of SUMO-2 targets in cells reveals an inverted SUMOylation motif and a hydrophobic cluster SUMOylation motif

21 January 2018

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21 January 2018

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Covalent modification of p73alpha by SUMO-1. Two-hybrid screening with p73 identifies novel SUMO-1-interacting proteins and a SUMO-1 interaction motif

21 January 2018

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Sumoylation of p68 and p72 RNA helicases affects protein stability and transactivation potential

21 January 2018

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FUS stimulates microRNA biogenesis by facilitating co-transcriptional Drosha recruitment

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12017-013-8256-8

The SUMO modification pathway is involved in the BRCA1 response to genotoxic stress.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12017-013-8256-8

hnRNP K: an HDM2 target and transcriptional coactivator of p53 in response to DNA damage

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12017-013-8256-8

Modification in reverse: the SUMO proteases

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12017-013-8256-8

Conjugation with the ubiquitin-related modifier SUMO-1 regulates the partitioning of PML within the nucleus

21 January 2018

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https://api.crossref.org/works/10.1007%2FS12017-013-8256-8

SUMO-1 transiently localizes to Cajal bodies in mammalian neurons.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12017-013-8256-8

Ebp1 sumoylation, regulated by TLS/FUS E3 ligase, is required for its anti-proliferative activity

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12017-013-8256-8

Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics

21 January 2018

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https://api.crossref.org/works/10.1007%2FS12017-013-8256-8

Identification of protein SUMOylation sites by mass spectrometry using combined microwave-assisted aspartic acid cleavage and tryptic digestion

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12017-013-8256-8

Automated identification of SUMOylation sites using mass spectrometry and SUMmOn pattern recognition software.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12017-013-8256-8

The splicing regulator Sam68 binds to a novel exonic splicing silencer and functions in SMN2 alternative splicing in spinal muscular atrophy

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12017-013-8256-8

The serine/arginine-rich protein SF2/ASF regulates protein sumoylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12017-013-8256-8

Sumoylation silences the plasma membrane leak K+ channel K2P1.

21 January 2018

1 reference

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A generic protein purification method for protein complex characterization and proteome exploration

21 January 2018

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Toward a molecular understanding of RNA remodeling by DEAD-box proteins

21 January 2018

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Functional heterogeneity of small ubiquitin-related protein modifiers SUMO-1 versus SUMO-2/3

21 January 2018

1 reference

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The small ubiquitin-like modifier-1 (SUMO-1) consensus sequence mediates Ubc9 binding and is essential for SUMO-1 modification

21 January 2018

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Modulation of RNA editing by functional nucleolar sequestration of ADAR2

21 January 2018

1 reference

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The ubiquitin-proteasome system is a key component of the SUMO-2/3 cycle

21 January 2018

1 reference

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Nuclear and unclear functions of SUMO

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12017-013-8256-8

Multiplex SILAC analysis of a cellular TDP-43 proteinopathy model reveals protein inclusions associated with SUMOylation and diverse polyubiquitin chains

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12017-013-8256-8

Proper SUMO-1 conjugation is essential to DJ-1 to exert its full activities

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12017-013-8256-8

Identification of a SUMO-binding motif that recognizes SUMO-modified proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12017-013-8256-8

The ABC's (and XYZ's) of peptide sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12017-013-8256-8

Phospho-regulated SUMO interaction modules connect the SUMO system to CK2 signaling

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12017-013-8256-8

Regulation of p53 family members by the ubiquitin-like SUMO system

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12017-013-8256-8

The nuclear dot protein sp100, characterization of domains necessary for dimerization, subcellular localization, and modification by small ubiquitin-like modifiers

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12017-013-8256-8

Sumoylation induced by the Arf tumor suppressor: a p53-independent function

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12017-013-8256-8

Pias1 interaction and sumoylation of metabotropic glutamate receptor 8

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12017-013-8256-8

Sam68 exerts separable effects on cell cycle progression and apoptosis

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12017-013-8256-8

In vivo localization and identification of SUMOylated proteins in the brain of His6-HA-SUMO1 knock-in mice

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12017-013-8256-8

Sumoylation in axons triggers retrograde transport of the RNA-binding protein La.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12017-013-8256-8

SUMO modification of heterogeneous nuclear ribonucleoproteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12017-013-8256-8

Distinct and overlapping sets of SUMO-1 and SUMO-2 target proteins revealed by quantitative proteomics

21 January 2018

1 reference

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A proteomic study of SUMO-2 target proteins

21 January 2018

1 reference

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A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles

21 January 2018

1 reference

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A role for SUMOylation in snoRNP biogenesis revealed by quantitative proteomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12017-013-8256-8

A proteomic screen for nucleolar SUMO targets shows SUMOylation modulates the function of Nop5/Nop58.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12017-013-8256-8

Mechanisms, regulation and consequences of protein SUMOylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12017-013-8256-8

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12017-013-8256-8

A novel method for high accuracy sumoylation site prediction from protein sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12017-013-8256-8

Global analysis of lysine ubiquitination by ubiquitin remnant immunoaffinity profiling

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12017-013-8256-8

An extended consensus motif enhances the specificity of substrate modification by SUMO

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12017-013-8256-8

Identification of nucleolin and nucleophosmin as genotoxic stress-responsive RNA-binding proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12017-013-8256-8

Structural insights into human KAP1 PHD finger-bromodomain and its role in gene silencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12017-013-8256-8

Broad spectrum identification of cellular small ubiquitin-related modifier (SUMO) substrate proteins

21 January 2018

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https://api.crossref.org/works/10.1007%2FS12017-013-8256-8

Systematic study of protein sumoylation: Development of a site-specific predictor of SUMOsp 2.0

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12017-013-8256-8

Physical and functional interaction between the transcriptional cofactor CBP and the KH domain protein Sam68

21 January 2018

1 reference

12 December 2020

Recombinant reconstitution of sumoylation reactions in vitro

1 reference

12 December 2020

Detection of protein SUMOylation in vivo

1 reference

12 December 2020

A universal strategy for proteomic studies of SUMO and other ubiquitin-like modifiers

1 reference

12 December 2020

System-wide changes to SUMO modifications in response to heat shock

1 reference

12 December 2020

Strategies to Identify Recognition Signals and Targets of SUMOylation.

1 reference

12 December 2020

Post-translational regulation of star proteins and effects on their biological functions

1 reference

12 December 2020

1 reference

12 December 2020

10.1007/S12017-013-8256-8

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23979992%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

8 March 2020

1036365514

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23979992%20AND%20SRC:MED&resulttype=core&format=json