(Q38295204)

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Bacteriophage T4 Dam DNA-[N6-adenine]methyltransferase. Kinetic evidence for a catalytically essential conformational change in the ternary complex

scientific article published on 30 October 2001

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scholarly article

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Europe PubMed Central

PubMed publication ID

1 September 2017

Bacteriophage T4 Dam DNA-[N6-adenine]methyltransferase. Kinetic evidence for a catalytically essential conformational change in the ternary complex (English)

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Europe PubMed Central

PubMed publication ID

1 September 2017

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Alexey A Evdokimov

1

1 reference

Europe PubMed Central

PubMed publication ID

1 September 2017

Victor V Zinoviev

2

1 reference

Europe PubMed Central

PubMed publication ID

1 September 2017

Ernst G Malygin

3

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Europe PubMed Central

PubMed publication ID

1 September 2017

Samuel L Schlagman

4

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Europe PubMed Central

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1 September 2017

Stanley Hattman

5

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Europe PubMed Central

PubMed publication ID

1 September 2017

language of work or name

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publication date

30 October 2001

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Europe PubMed Central

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1 September 2017

Journal of Biological Chemistry

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Europe PubMed Central

PubMed publication ID

1 September 2017

277

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Europe PubMed Central

PubMed publication ID

1 September 2017

1

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Europe PubMed Central

PubMed publication ID

1 September 2017

279-286

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Europe PubMed Central

PubMed publication ID

1 September 2017

Chemistry and biology of DNA methyltransferases

1 reference

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Reconciling structure and function in HhaI DNA cytosine-C-5 methyltransferase

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The mechanism of DNA cytosine-5 methylation. Kinetic and mutational dissection of Hhai methyltransferase

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Recombinant human DNA (cytosine-5) methyltransferase. II. Steady-state kinetics reveal allosteric activation by methylated dna.

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21 January 2018

Kinetic mechanism of the EcoRI DNA methyltransferase

1 reference

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Molecular enzymology of the EcoRV DNA-(Adenine-N (6))-methyltransferase: kinetics of DNA binding and bending, kinetic mechanism and linear diffusion of the enzyme on DNA.

1 reference

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21 January 2018

Dynamic modes of the flipped-out cytosine during HhaI methyltransferase-DNA interactions in solution.

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21 January 2018

Measurement of the absolute temporal coupling between DNA binding and base flipping

1 reference

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Differential binding of S-adenosylmethionine S-adenosylhomocysteine and Sinefungin to the adenine-specific DNA methyltransferase M.TaqI

1 reference

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The activity of the murine DNA methyltransferase Dnmt1 is controlled by interaction of the catalytic domain with the N-terminal part of the enzyme leading to an allosteric activation of the enzyme after binding to methylated DNA

1 reference

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21 January 2018

The double role of methyl donor and allosteric effector of S-adenosyl-methionine for Dam methylase of E. coli

1 reference

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21 January 2018

Structure of pvu II DNA-(cytosine N4) methyltransferase, an example of domain permutation and protein fold assignment

1 reference

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21 January 2018

Conserved sequence motif DPPY in region IV of the phage T4 Dam DNA-[N6-adenine]-methyltransferase is important for S-adenosyl-L-methionine binding

1 reference

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21 January 2018

A dual role for substrate S-adenosyl-L-methionine in the methylation reaction with bacteriophage T4 Dam DNA-[N6-adenine]-methyltransferase

1 reference

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21 January 2018

Universal catalytic domain structure of AdoMet-dependent methyltransferases.

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Crystal structure of the DpnM DNA adenine methyltransferase from the DpnII restriction system of streptococcus pneumoniae bound to S-adenosylmethionine

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21 January 2018

Structure of human DNMT2, an enigmatic DNA methyltransferase homolog that displays denaturant-resistant binding to DNA

1 reference

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21 January 2018

Structure-guided analysis reveals nine sequence motifs conserved among DNA amino-methyltransferases, and suggests a catalytic mechanism for these enzymes

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21 January 2018

DNA distortion and base flipping by the EcoRV DNA methyltransferase. A study using interference at dA and T bases and modified deoxynucleosides

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21 January 2018

Functional roles of conserved amino acid residues in DNA methyltransferases investigated by site-directed mutagenesis of the EcoRV adenine-N6-methyltransferase

1 reference

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21 January 2018

Mutational analysis of target base flipping by the EcoRV adenine-N6 DNA methyltransferase

1 reference

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21 January 2018

Changing the target base specificity of the EcoRV DNA methyltransferase by rational de novo protein-design

1 reference

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21 January 2018

Phage T4 DNA [N6-adenine] methyltransferase: kinetic studies using oligonucleotides containing native or modified recognition sites

1 reference

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21 January 2018

Effect of base analog substitutions in the specific GATC site on binding and methylation of oligonucleotide duplexes by the bacteriophage T4 Dam DNA-[N6-adenine] methyltransferase

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21 January 2018

A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding

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Calculation of protein extinction coefficients from amino acid sequence data

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21 January 2018

Pre-steady state kinetics of bacteriophage T4 dam DNA-[N(6)-adenine] methyltransferase: interaction with native (GATC) or modified sites

1 reference

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21 January 2018

16 Product inhibition and abortive complex formation

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21 January 2018

Purification, crystallization, and preliminary X-ray diffraction analysis of an M.HhaI-AdoMet complex.

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21 January 2018

Functional mapping of the EcoRV DNA methyltransferase by random mutagenesis and screening for catalytically inactive mutants

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21 January 2018

The crystal structure of Haelll methyltransferase covalently complexed to DNA: An extrahelical cytosine and rearranged base pairing

1 reference

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21 January 2018

2-Aminopurine as a fluorescent probe for DNA base flipping by methyltransferases

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21 January 2018

Sequence-specific binding of DNA by the EcoRV restriction and modification enzymes with nucleic acid and cofactor analogues

1 reference

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21 January 2018

S-adenosyl methionine alters the DNA contacts of the EcoKI methyltransferase

1 reference

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21 January 2018

Interaction of the phage T4 Dam DNA-[N6-adenine] methyltransferase with oligonucleotides containing native or modified (defective) recognition sites

1 reference

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21 January 2018

Enzymatic C5-cytosine methylation of DNA: mechanistic implications of new crystal structures for HhaL methyltransferase-DNA-AdoHcy complexes

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Depression of adenosylmethionine content of Escherichia coli by thioglycerol

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The kinetics of enzyme-catalyzed reactions with two or more substrates or products

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Kinetic mechanism of cytosine DNA methyltransferase MspI

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Murine DNA (cytosine-5-)-methyltransferase: steady-state and substrate trapping analyses of the kinetic mechanism

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Kinetic characterization of the EcaI methyltransferase

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Cloning, over-expression and the catalytic properties of the EcoP15 modification methylase from Escherichia coli

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The PvuII DNA (cytosine-N4)-methyltransferase comprises two trypsin-defined domains, each of which binds a molecule of S-adenosyl-L-methionine

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21 January 2018

Structure-based sequence alignment of three AdoMet-dependent DNA methyltransferases

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21 January 2018

Molecular cloning of a functional dam+ gene coding for phage T4 DNA adenine methylase

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21 January 2018

Phage T4 DNA [N6-adenine]methyltransferase. Overexpression, purification, and characterization

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Cleavage and methylation of DNA by the restriction endonuclease HinfIII isolated from Haemophilus influenzae Rf

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Catalase activity at high concentration of hydrogen peroxide

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Identifiers

10.1074/JBC.M108864200

1 reference

Europe PubMed Central

PubMed publication ID

1 September 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

1 September 2017

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