(Q38297436)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11522831%20AND%20SRC:MED&resulttype=core&format=json

10 November 2019

title

5'-bis-pyrenylated oligonucleotides displaying excimer fluorescence provide sensitive probes of RNA sequence and structure (English)

1 reference

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10 November 2019

3

1 reference

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10 November 2019

Vladislav A Petyuk

4

1 reference

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10 November 2019

author name string

E Kostenko

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11522831%20AND%20SRC:MED&resulttype=core&format=json

10 November 2019

M Dobrikov

2

1 reference

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10 November 2019

N Komarova

5

1 reference

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10 November 2019

V Vlassov

6

1 reference

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10 November 2019

M Zenkova

7

1 reference

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10 November 2019

language of work or name

English

0 references

publication date

1 September 2001

1 reference

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10 November 2019

published in

Nucleic Acids Research

1 reference

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10 November 2019

volume

29

1 reference

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10 November 2019

issue

17

1 reference

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10 November 2019

page(s)

3611-3620

1 reference

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The kinetics of oligonucleotide replacements

10 November 2019

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55892

Effects of RNA secondary structure on cellular antisense activity

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55892

Progress in antisense technology: the end of the beginning

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55892

2'-Pyrene modified oligonucleotide provides a highly sensitive fluorescent probe of RNA.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55892

A rapid in vitro method for obtaining RNA accessibility patterns for complementary DNA probes: correlation with an intracellular pattern and known RNA structures

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55892

Selecting effective antisense reagents on combinatorial oligonucleotide arrays

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55892

An in vitro messenger RNA binding assay as a tool for identifying hybridization-competent antisense oligonucleotides

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55892

Quantitative hybridization kinetics of DNA probes to RNA in solution followed by diffusional fluorescence correlation analysis

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55892

Binding of complementary oligonucleotides to free and aminoacyl transfer ribonucleic acid synthetase bound transfer ribonucleic acid

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55892

Oligoribonucleotide synthesis using T7 RNA polymerase and synthetic DNA templates

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55892

Optimization of excimer-forming two-probe nucleic acid hybridization method with pyrene as a fluorophore

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55892

Nucleic acid detection using non-radioactive labelling methods

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55892

The folding of large RNAs studied by hybridization to arrays of complementary oligonucleotides

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55892

Synthesis and properties of oligonucleotides bearing a pendant pyrene group.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55892

Oligonucleotides with bis-pyrene adduct in the backbone: syntheses and properties of intramolecular excimer forming probe

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55892

Synthesis and properties of an oligodeoxynucleotide modified with a pyrene derivative at the 5'-phosphate

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55892

Fluorescent-labeled oligonucleotides that exhibit a measurable signal in the presence of complementary DNA

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55892

Implication of RNA structure on antisense oligonucleotide hybridization kinetics

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55892

A novel approach to introduce site-directed specific cross-links within RNA-protein complexes. Application to the Escherichia coli threonyl-tRNA synthetase/translational operator complex.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=55892

[Stabilization of DNA-duplexes by minor groove binding ligands with formation of a complex type 1:2 with parallel orientation of ligands in the minor groove]

31 August 2018

1 reference

12 December 2020

[Secondary structure of 5'-terminal region of mRNA of human multidrug resistance gene]

1 reference

12 December 2020

Study on RNA structure by pyrene-labeled 2'-O-methyloligoribonucleotides

1 reference

12 December 2020

Secondary structure of the 5'-region of PGY1/MDR1 mRNA

1 reference

12 December 2020

The visualization of human erythrocyte membrane proteins and glycoproteins in SDS polyacrylamide gels employing a single staining procedure

1 reference

12 December 2020

Reagent for introducing pyrene residues in oligonucleotides

1 reference

12 December 2020

Overcoming multidrug resistance in human tumor cells using free and liposomally encapsulated antisense oligodeoxynucleotides

1 reference

12 December 2020

Combinatorial screening and rational optimization for hybridization to folded hepatitis C virus RNA of oligonucleotides with biological antisense activity

1 reference

12 December 2020

[Novel reagent for labeling of biomolecules--activated derivative of pyrene dichromophore with excimeric fluorescence]

1 reference

12 December 2020

[Sensitized photomodification by binary systems. I. Synthesis of oligonucleotide reagents, and the effect of their structure on the efficacy of target modification]

1 reference

12 December 2020

Mapping of RNA accessible sites for antisense experiments with oligonucleotide libraries

1 reference

12 December 2020

Conjugates of oligonucleotides with polyaromatic fluorophores as promising DNA probes

1 reference

12 December 2020

Length dependence of RNA-RNA annealing

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/29.17.3611

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11522831%20AND%20SRC:MED&resulttype=core&format=json

10 November 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11522831%20AND%20SRC:MED&resulttype=core&format=json

10 November 2019

PubMed publication ID

11522831

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11522831%20AND%20SRC:MED&resulttype=core&format=json