(Q38331219)

English

Crosslinking the EcoRV restriction endonuclease across the DNA-binding site reveals transient intermediates and conformational changes of the enzyme during DNA binding and catalytic turnover

scientific article

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

Crosslinking the EcoRV restriction endonuclease across the DNA-binding site reveals transient intermediates and conformational changes of the enzyme during DNA binding and catalytic turnover (English)

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

2

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

author name string

Schulze C

1

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

Franke I

3

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

Urbanke C

4

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

Pingoud A

5

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

language of work or name

0 references

publication date

1 November 1998

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

The EMBO Journal

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

17

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

22

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

6757-6766

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

Kinetic characterization of linear diffusion of the restriction endonuclease EcoRV on DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1171021

6 September 2017

Conformational transitions and structural deformability of EcoRV endonuclease revealed by crystallographic analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1171021

6 September 2017

Recognition and cleavage of DNA by type-II restriction endonucleases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1171021

6 September 2017

Rapid-reaction analysis of plasmid DNA cleavage by the EcoRV restriction endonuclease.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1171021

6 September 2017

A helical arch allowing single-stranded DNA to thread through T5 5'-exonuclease

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1171021

6 September 2017

Introduction of asymmetry in the naturally symmetric restriction endonuclease EcoRV to investigate intersubunit communication in the homodimeric protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1171021

6 September 2017

Probing the indirect readout of the restriction enzyme EcoRV. Mutational analysis of contacts to the DNA backbone

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1171021

6 September 2017

Calf 5' to 3' exo/endonuclease must slide from a 5' end of the substrate to perform structure-specific cleavage

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1171021

6 September 2017

The crystal structure of EcoRV endonuclease and of its complexes with cognate and non-cognate DNA fragments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1171021

6 September 2017

Coupling of local folding to site-specific binding of proteins to DNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1171021

6 September 2017

Protein engineering of the restriction endonuclease EcoRV: replacement of an amino acid residue in the DNA binding site leads to an altered selectivity towards unmodified and modified substrates

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1171021

6 September 2017

Mg2+ binding to the active site of EcoRV endonuclease: a crystallographic study of complexes with substrate and product DNA at 2 A resolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1171021

6 September 2017

DNA binding specificity of the EcoRV restriction endonuclease is increased by Mg2+ binding to a metal ion binding site distinct from the catalytic center of the enzyme.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1171021

6 September 2017

Site-directed mutagenesis studies with EcoRV restriction endonuclease to identify regions involved in recognition and catalysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1171021

6 September 2017

Linear diffusion of the restriction endonuclease EcoRV on DNA is essential for the in vivo function of the enzyme

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1171021

27 September 2017

Functional roles of conserved amino acid residues in DNA methyltransferases investigated by site-directed mutagenesis of the EcoRV adenine-N6-methyltransferase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1171021

23 June 2018

Specific DNA recognition by EcoRV restriction endonuclease induced by calcium ions.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1171021

31 August 2018

EcoRV restriction endonuclease binds all DNA sequences with equal affinity

1 reference

https://pubmed.ncbi.nlm.nih.gov/9822618

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The production and characterization of artificial heterodimers of the restriction endonuclease EcoRV

1 reference

https://pubmed.ncbi.nlm.nih.gov/9822618

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Relaxed specificity of the EcoRV restriction endonuclease

1 reference

https://pubmed.ncbi.nlm.nih.gov/9822618

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/EMBOJ/17.22.6757

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

ResearchGate publication ID

0 references

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