(Q38342841)

2 September 2017

title

Identification of conserved Drosophila-specific euchromatin-restricted non-coding sequence motifs (English)

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2 September 2017

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3

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2 September 2017

Chol-Hee Jung

1

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2 September 2017

Igor V Makunin

series ordinal

2

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2 September 2017

publication date

4 June 2010

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2 September 2017

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2 September 2017

volume

96

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2 September 2017

issue

3

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2 September 2017

page(s)

154-166

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The relationship between non-protein-coding DNA and eukaryotic complexity.

2 September 2017

cites work

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

Evo-Devo and an Expanding Evolutionary Synthesis: A Genetic Theory of Morphological Evolution

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

Noncoding RNA in development

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

A new paradigm for developmental biology

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

Initial sequencing and comparative analysis of the mouse genome

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

Computational RNomics of drosophilids

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

Thousands of corresponding human and mouse genomic regions unalignable in primary sequence contain common RNA structure

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

Comparative genomics beyond sequence-based alignments: RNA structures in the ENCODE regions

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

Ultraconserved Elements in the Human Genome

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

Large-Scale Appearance of Ultraconserved Elements in Tetrapod Genomes and Slowdown of the Molecular Clock

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

Ultraconserved regions encoding ncRNAs are altered in human leukemias and carcinomas

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

Evolutionary turnover of mammalian transcription start sites

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

Rapid evolution of noncoding RNAs: lack of conservation does not mean lack of function

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

Evidence for turnover of functional noncoding DNA in mammalian genome evolution

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

Heterotachy in mammalian promoter evolution

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

Conservation of RET regulatory function from human to zebrafish without sequence similarity

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

A distal enhancer and an ultraconserved exon are derived from a novel retroposon

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

A large family of ancient repeat elements in the human genome is under strong selection

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

Thousands of human mobile element fragments undergo strong purifying selection near developmental genes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

Raising the estimate of functional human sequences

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

Repeated recruitment of LTR retrotransposons as promoters by the anti-apoptotic locus NAIP during mammalian evolution

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

A family of conserved noncoding elements derived from an ancient transposable element

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

The expanding snoRNA world

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

Studying statistical properties of regulatory DNA sequences, and their use in predicting regulatory regions in the eukaryotic genomes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

The UCSC genome browser database: update 2007.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

Sequence logos: a new way to display consensus sequences

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

JASPAR, the open access database of transcription factor-binding profiles: new content and tools in the 2008 update

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

Drosophila DNase I footprint database: a systematic genome annotation of transcription factor binding sites in the fruitfly, Drosophila melanogaster.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

Quantifying similarity between motifs

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

Searching for patterns in genomic data

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

Fast folding and comparison of RNA secondary structures

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

GO::TermFinder--open source software for accessing Gene Ontology information and finding significantly enriched Gene Ontology terms associated with a list of genes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

Carbodiimide-mediated cross-linking of RNA to nylon membranes improves the detection of siRNA, miRNA and piRNA by northern blot

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

Reconsidering the significance of genomic word frequencies

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

Discovery of functional elements in 12 Drosophila genomes using evolutionary signatures

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

REDfly 2.0: an integrated database of cis-regulatory modules and transcription factor binding sites in Drosophila

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

Genomic analysis of Drosophila chromosome underreplication reveals a link between replication control and transcriptional territories

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

Intercalary heterochromatin in Drosophila melanogaster polytene chromosomes and the problem of genetic silencing.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

Drosophila dumpy is a gigantic extracellular protein required to maintain tension at epidermal-cuticle attachment sites

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

General outlines of the molecular genetics of the Notch signalling pathway in Drosophila melanogaster: a review

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

Divergence of larval morphology between Drosophila sechellia and its sibling species caused by cis-regulatory evolution of ovo/shaven-baby

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

Morphological evolution through multiple cis-regulatory mutations at a single gene.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

Changes in the F-actin cytoskeleton during neurosensory bristle development in Drosophila: the role of singed and forked proteins

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

The interpretation of morphogen gradients

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

Dissection of cis-regulatory elements of the Drosophila gene Serrate.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

Homotypic regulatory clusters in Drosophila.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

Homeotic genes of the Bithorax complex repress limb development in the abdomen of the Drosophila embryo through the target gene Distal-less

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

The Drosophila melanogaster suppressor of Hairy-wing protein binds to specific sequences of the gypsy retrotransposon

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

Genomic mapping of Suppressor of Hairy-wing binding sites in Drosophila

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

Some statistical properties of regulatory DNA sequences, and their use in predicting regulatory regions in the Drosophila genome: the fluffy-tail test

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

Striking nucleotide frequency pattern at the borders of highly conserved vertebrate non-coding sequences

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

Systematic discovery of regulatory motifs in conserved regions of the human genome, including thousands of CTCF insulator sites

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

Sequence signature analysis of chromosome identity in three Drosophila species

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

Painting of fourth, a chromosome-specific protein in Drosophila

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

POF and HP1 bind expressed exons, suggesting a balancing mechanism for gene regulation

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

Exaptation—a Missing Term in the Science of Form

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

Evolution of the mammalian transcription factor binding repertoire via transposable elements

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

Transposable elements and the evolution of regulatory networks

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

A genome scale location analysis of human Staf/ZNF143-binding sites suggests a widespread role for human Staf/ZNF143 in mammalian promoters

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2010.05.006

10.1016/J.YGENO.2010.05.006

7 January 2021

Identifiers

DOI

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2 September 2017

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