(Q38359134)

English

Influence of the phosphate backbone on the recognition and hydrolysis of DNA by the EcoRV restriction endonuclease. A study using oligodeoxynucleotide phosphorothioates

scientific article published in April 1996

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scholarly article

1 reference

Europe PubMed Central

2 September 2017

Influence of the phosphate backbone on the recognition and hydrolysis of DNA by the EcoRV restriction endonuclease. A study using oligodeoxynucleotide phosphorothioates (English)

1 reference

Europe PubMed Central

2 September 2017

author name string

Thorogood H

1

1 reference

Europe PubMed Central

2 September 2017

Grasby JA

2

1 reference

Europe PubMed Central

2 September 2017

Connolly BA

3

1 reference

Europe PubMed Central

2 September 2017

language of work or name

0 references

publication date

1 April 1996

1 reference

Europe PubMed Central

2 September 2017

number of pages

8

1 reference

based on heuristic

inferred from page(s)

Journal of Biological Chemistry

1 reference

Europe PubMed Central

2 September 2017

271

1 reference

Europe PubMed Central

2 September 2017

8855-8862

1 reference

Europe PubMed Central

2 September 2017

15

1 reference

Europe PubMed Central

2 September 2017

Structural aspects of protein-DNA recognition

1 reference

https://api.crossref.org/works/10.1074%2FJBC.271.15.8855

21 January 2018

DNA recognition by proteins with the helix-turn-helix motif

1 reference

https://api.crossref.org/works/10.1074%2FJBC.271.15.8855

21 January 2018

Transcription factors: structural families and principles of DNA recognition

1 reference

https://api.crossref.org/works/10.1074%2FJBC.271.15.8855

21 January 2018

Protein-DNA interaction. No code for recognition

1 reference

https://api.crossref.org/works/10.1074%2FJBC.271.15.8855

21 January 2018

Sequence-specific recognition of double helical nucleic acids by proteins

1 reference

https://api.crossref.org/works/10.1074%2FJBC.271.15.8855

21 January 2018

Crystal structure of trp repressor/operator complex at atomic resolution

1 reference

https://api.crossref.org/works/10.1074%2FJBC.271.15.8855

21 January 2018

"Ultraviolet footprinting" accurately maps sequence-specific contacts and DNA kinking in the EcoRI endonuclease-DNA complex

1 reference

https://api.crossref.org/works/10.1074%2FJBC.271.15.8855

21 January 2018

The energetic basis of specificity in the Eco RI endonuclease--DNA interaction.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.271.15.8855

21 January 2018

Base analogs in study of restriction enzyme-DNA interactions

1 reference

https://api.crossref.org/works/10.1074%2FJBC.271.15.8855

21 January 2018

Facilitated distortion of the DNA site enhances EcoRI endonuclease-DNA recognition

1 reference

https://api.crossref.org/works/10.1074%2FJBC.271.15.8855

21 January 2018

Incorporation of a complete set of deoxyadenosine and thymidine analogues suitable for the study of protein nucleic acid interactions into oligodeoxynucleotides. Application to the EcoRV restriction endonuclease and modification methylase

1 reference

https://api.crossref.org/works/10.1074%2FJBC.271.15.8855

21 January 2018

Interaction of the EcoRV restriction endonuclease with the deoxyadenosine and thymidine bases in its recognition hexamer d(GATATC).

1 reference

https://api.crossref.org/works/10.1074%2FJBC.271.15.8855

21 January 2018

Interaction of the restriction endonuclease EcoRV with the deoxyguanosine and deoxycytidine bases in its recognition sequence

1 reference

https://api.crossref.org/works/10.1074%2FJBC.271.15.8855

21 January 2018

Nucleoside phosphorothioates

1 reference

https://api.crossref.org/works/10.1074%2FJBC.271.15.8855

21 January 2018

Bond order and charge localization in nucleoside phosphorothioates

1 reference

https://api.crossref.org/works/10.1074%2FJBC.271.15.8855

21 January 2018

Stability constants of magnesium and cadmium complexes of adenine nucleotides and thionucleotides and rate constants for formation and dissociation of magnesium-ATP and magnesium-ADP

1 reference

https://api.crossref.org/works/10.1074%2FJBC.271.15.8855

21 January 2018

Stereochemical outcome of the hydrolysis reaction catalyzed by the EcoRV restriction endonuclease

1 reference

https://api.crossref.org/works/10.1074%2FJBC.271.15.8855

21 January 2018

Investigation of the inhibitory role of phosphorothioate internucleotidic linkages on the catalytic activity of the restriction endonuclease EcoRV.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.271.15.8855

21 January 2018

Structure-function correlation for the EcoRV restriction enzyme: from non-specific binding to specific DNA cleavage

1 reference

https://api.crossref.org/works/10.1074%2FJBC.271.15.8855

21 January 2018

Mg2+ binding to the active site of EcoRV endonuclease: a crystallographic study of complexes with substrate and product DNA at 2 A resolution

1 reference

https://api.crossref.org/works/10.1074%2FJBC.271.15.8855

21 January 2018

Discrimination between DNA sequences by the EcoRV restriction endonuclease.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.271.15.8855

21 January 2018

EcoRV restriction endonuclease: communication between catalytic metal ions and DNA recognition

1 reference

https://api.crossref.org/works/10.1074%2FJBC.271.15.8855

21 January 2018

EcoRV restriction endonuclease: communication between DNA recognition and catalysis

1 reference

https://api.crossref.org/works/10.1074%2FJBC.271.15.8855

21 January 2018

Specific DNA recognition by EcoRV restriction endonuclease induced by calcium ions.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.271.15.8855

21 January 2018

Rapid reaction analysis of the catalytic cycle of the EcoRV restriction endonuclease.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.271.15.8855

21 January 2018

Divalent metal ions at the active sites of the EcoRV and EcoRI restriction endonucleases.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.271.15.8855

21 January 2018

Accuracy of the EcoRV restriction endonuclease: binding and cleavage studies with oligodeoxynucleotide substrates containing degenerate recognition sequences

1 reference

https://api.crossref.org/works/10.1074%2FJBC.271.15.8855

21 January 2018

Role of thymidine residues in DNA recognition by the EcoRI and EcoRV restriction endonucleases

1 reference

https://api.crossref.org/works/10.1074%2FJBC.271.15.8855

21 January 2018

Analysis of the recognition mechanism involved in the EcoRV catalyzed cleavage of DNA using modified oligodeoxynucleotides

1 reference

https://api.crossref.org/works/10.1074%2FJBC.271.15.8855

21 January 2018

Effects of functional group changes in the EcoRV recognition site on the cleavage reaction catalyzed by the endonuclease

1 reference

https://api.crossref.org/works/10.1074%2FJBC.271.15.8855

21 January 2018

Synthesis and properties of dithymidine phosphate analogues containing 3'-thiothymidine

1 reference

https://api.crossref.org/works/10.1074%2FJBC.271.15.8855

21 January 2018

Site-directed mutagenesis studies with EcoRV restriction endonuclease to identify regions involved in recognition and catalysis

1 reference

https://api.crossref.org/works/10.1074%2FJBC.271.15.8855

21 January 2018

DNA binding specificity of the EcoRV restriction endonuclease is increased by Mg2+ binding to a metal ion binding site distinct from the catalytic center of the enzyme.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.271.15.8855

21 January 2018

Overproduction of the EcoR V endonuclease and methylase

1 reference

https://api.crossref.org/works/10.1074%2FJBC.271.15.8855

21 January 2018

Continuous spectrophotometric assay for restriction endonucleases using synthetic oligodeoxynucleotides and based on the hyperchromic effect

1 reference

https://api.crossref.org/works/10.1074%2FJBC.271.15.8855

21 January 2018

Absolute configuration of the diastereomers of adenosine 5'-O-(1-thiotriphosphate): consequences for the stereochemistry of polymerization by DNA-dependent RNA polymerase from Escherichia coli

1 reference

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21 January 2018

Determination of RNA-protein contacts using thiophosphate substitutions

1 reference

https://api.crossref.org/works/10.1074%2FJBC.271.15.8855

21 January 2018

Substrate-assisted catalysis in the cleavage of DNA by the EcoRI and EcoRV restriction enzymes

1 reference

https://api.crossref.org/works/10.1074%2FJBC.271.15.8855

21 January 2018

Ribozyme-catalyzed and nonenzymatic reactions of phosphate diesters: rate effects upon substitution of sulfur for a nonbridging phosphoryl oxygen atom

1 reference

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21 January 2018

On the catalytic mechanism of EcoRI and EcoRV. A detailed proposal based on biochemical results, structural data and molecular modelling

1 reference

https://api.crossref.org/works/10.1074%2FJBC.271.15.8855

21 January 2018

Alkyl phosphotriester modified oligodeoxyribonucleotides. V. Synthesis and absolute configuration of Rp and Sp diastereomers of an ethyl phosphotriester (Et) modified EcoRI recognition sequence, d[GGAA(Et)TTCC]. A synthetic approach to regio- and st

1 reference

https://api.crossref.org/works/10.1074%2FJBC.271.15.8855

21 January 2018

Probing the indirect readout of the restriction enzyme EcoRV. Mutational analysis of contacts to the DNA backbone

1 reference

https://api.crossref.org/works/10.1074%2FJBC.271.15.8855

21 January 2018

Synthesis and characterization of an octanucleotide containing the EcoRI recognition sequence with a phosphorothioate group at the cleavage site

1 reference

https://api.crossref.org/works/10.1074%2FJBC.271.15.8855

21 January 2018

Oligonucleoside phosphorothioates

1 reference

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21 January 2018

Chiral phosphorothioate analogues of B-DNA. The crystal structure of Rp-d[Gp(S)CpGp(S)CpGp(S)C]

1 reference

https://api.crossref.org/works/10.1074%2FJBC.271.15.8855

21 January 2018

Application of phosphate-backbone-modified oligonucleotides in the studies on EcoRI endonuclease mechanism of action

1 reference

https://api.crossref.org/works/10.1074%2FJBC.271.15.8855

21 January 2018

EcoRV restriction endonuclease binds all DNA sequences with equal affinity

1 reference

https://api.crossref.org/works/10.1074%2FJBC.271.15.8855

21 January 2018

Magnesium(2+) confers DNA binding specificity to the EcoRV restriction endonuclease

1 reference

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21 January 2018

3H-1,2-Benzodithiole-3-one 1,1-dioxide as an improved sulfurizing reagent in the solid-phase synthesis of oligodeoxyribonucleoside phosphorothioates

1 reference

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21 January 2018

Synthesis and configurational analysis of a dinucleoside phosphate isotopically chiral at phosphorus. Stereochemical course of Penicillium citrum nuclease P1 reaction

1 reference

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21 January 2018

Interactions between the trp repressor and its operator sequence as studied by base analog substitution

1 reference

https://api.crossref.org/works/10.1074%2FJBC.271.15.8855

21 January 2018

Oligodeoxyribonucleotide phosphotriesters

1 reference

https://api.crossref.org/works/10.1074%2FJBC.271.15.8855

21 January 2018

Identifiers

10.1074/JBC.271.15.8855

1 reference

Europe PubMed Central

2 September 2017

1 reference

Europe PubMed Central

2 September 2017

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