(Q38363364)

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Sequence-specific recognition of DNA by hydrophobic, alanine-rich mutants of the basic region/leucine zipper motif investigated by fluorescence anisotropy

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scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

2 September 2017

Sequence-specific recognition of DNA by hydrophobic, alanine-rich mutants of the basic region/leucine zipper motif investigated by fluorescence anisotropy (English)

1 reference

Europe PubMed Central

PubMed publication ID

2 September 2017

1 reference

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Gregory H Bird

1

1 reference

Europe PubMed Central

PubMed publication ID

2 September 2017

Ajay R Lajmi

2

1 reference

Europe PubMed Central

PubMed publication ID

2 September 2017

Jumi A Shin

3

1 reference

Europe PubMed Central

PubMed publication ID

2 September 2017

publication date

1 October 2002

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Europe PubMed Central

PubMed publication ID

2 September 2017

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Europe PubMed Central

PubMed publication ID

2 September 2017

65

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Europe PubMed Central

PubMed publication ID

2 September 2017

1

1 reference

Europe PubMed Central

PubMed publication ID

2 September 2017

10-20

1 reference

Europe PubMed Central

PubMed publication ID

2 September 2017

Helix stabilization by Glu-...Lys+ salt bridges in short peptides of de novo design

1 reference

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Saturation mutagenesis of the yeast his3 regulatory site: requirements for transcriptional induction and for binding by GCN4 activator protein

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The X-ray structure of the GCN4-bZIP bound to ATF/CREB site DNA shows the complex depends on DNA flexibility

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The GCN4 basic region leucine zipper binds DNA as a dimer of uninterrupted alpha helices: crystal structure of the protein-DNA complex

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Crystal structure of a bZIP/DNA complex at 2.2 A: determinants of DNA specific recognition

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Crystal structure of the heterodimeric bZIP transcription factor c-Fos-c-Jun bound to DNA

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A thermodynamic scale for the helix-forming tendencies of the commonly occurring amino acids

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Solution structure of the basic region from the transcriptional activator GCN4

1 reference

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21 January 2018

GCN4 binds with high affinity to DNA sequences containing a single consensus half-site

1 reference

https://api.crossref.org/works/10.1002%2FBIP.10205

21 January 2018

Identification of C/EBP basic region residues involved in DNA sequence recognition and half-site spacing preference

1 reference

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21 January 2018

In vivo selection of basic region-leucine zipper proteins with altered DNA-binding specificities

1 reference

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Fluorescence anisotropy assays implicate protein-protein interactions in regulating trp repressor DNA binding

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Cloning of random-sequence oligodeoxynucleotides

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PCR-based gene synthesis and protein NMR spectroscopy

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Gene synthesis, high-level expression, and mutagenesis of Thiobacillus ferrooxidans rusticyanin: His 85 is a ligand to the blue copper center

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Gene synthesis, high-level expression and assignment of backbone15N and13C resonances of soybean leghemoglobin

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Control of aggregation in protein refolding: the temperature-leap tactic

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57 Sequencing end-labeled DNA with base-specific chemical cleavages

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Calculating thermodynamic data for transitions of any molecularity from equilibrium melting curves

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The CREB family of transcription activators

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Cognate DNA binding specificity retained after leucine zipper exchange between GCN4 and C/EBP.

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Application of fluorescence energy transfer and polarization to monitor Escherichia coli cAMP receptor protein and lac promoter interaction

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Substrate binding and turnover by the highly specific I-PpoI endonuclease.

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Thermodynamic analysis of monoclonal antibody binding to duplex DNA.

1 reference

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DNA detection by strand displacement amplification and fluorescence polarization with signal enhancement using a DNA binding protein

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21 January 2018

Yeast TATA binding protein interaction with DNA: fluorescence determination of oligomeric state, equilibrium binding, on-rate, and dissociation kinetics

1 reference

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Fluorescence anisotropy: rapid, quantitative assay for protein-DNA and protein-protein interaction.

1 reference

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A capillary electrophoresis mobility shift assay for protein-DNA binding affinities free in solution.

1 reference

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Mutations that define the optimal half-site for binding yeast GCN4 activator protein and identify an ATF/CREB-like repressor that recognizes similar DNA sites

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Mechanism of phage P22 tailspike protein folding mutations

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Cold rescue of the thermolabile tailspike intermediate at the junction between productive folding and off-pathway aggregation

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21 January 2018

Protein-DNA interactions: A structural analysis

1 reference

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21 January 2018

Highly conserved residues in the bZIP domain of yeast GCN4 are not essential for DNA binding

1 reference

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21 January 2018

Adaptability at the protein-DNA interface is an important aspect of sequence recognition by bZIP proteins

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The contribution of the methyl groups on thymine bases to binding specificity and affinity by alanine-rich mutants of the bZIP motif

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21 January 2018

Alanine point-mutations in the reactive region of bovine pancreatic trypsin inhibitor: effects on the kinetics and thermodynamics of binding to beta-trypsin and alpha-chymotrypsin.

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21 January 2018

Coupled folding and site-specific binding of the GCN4-bZIP transcription factor to the AP-1 and ATF/CREB DNA sites studied by microcalorimetry.

1 reference

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21 January 2018

Additivity principles in biochemistry

1 reference

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Thermodynamics of the interactions of lac repressor with variants of the symmetric lac operator: effects of converting a consensus site to a non-specific site.

1 reference

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21 January 2018

Binding of a hairpin polyamide in the minor groove of DNA: sequence-specific enthalpic discrimination

1 reference

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Minimum length of a sequence-specific DNA binding peptide

1 reference

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DNA-induced increase in the .alpha.-helical content of C/EBP and GCN4

1 reference

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Binding of Cationic (+4) Alanine- and Glycine-Containing Oligopeptides to Double-Stranded DNA: Thermodynamic Analysis of Effects of Coulombic Interactions and α-Helix Induction†

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Folding transition in the DMA-binding domain of GCN4 on specific binding to DNA

1 reference

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21 January 2018

Identifiers

10.1002/BIP.10205

1 reference

Europe PubMed Central

PubMed publication ID

2 September 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

2 September 2017

ResearchGate publication ID

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