(Q38461107)

3 September 2017

title

Bridging the scales: semantic integration of quantitative SBML in graphical multi-cellular models and simulations with EPISIM and COPASI. (English)

1 reference

3 September 2017

Thomas Sütterlin

1

1 reference

3 September 2017

Christoph Kolb

2

1 reference

3 September 2017

Hartmut Dickhaus

3

1 reference

3 September 2017

Dirk Jäger

4

1 reference

3 September 2017

Niels Grabe

5

1 reference

3 September 2017

language of work or name

English

0 references

publication date

18 November 2012

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3 September 2017

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3 September 2017

volume

29

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3 September 2017

issue

2

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3 September 2017

page(s)

223-229

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Integrating intracellular dynamics using CompuCell3D and Bionetsolver: applications to multiscale modelling of cancer cell growth and invasion

3 September 2017

cites work

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS659

JSBML: a flexible Java library for working with SBML.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS659

A multicellular systems biology model predicts epidermal morphology, kinetics and Ca2+ flow

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS659

Prediction and validation of cell alignment along microvessels as order principle to restore tissue architecture in liver regeneration

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS659

COPASI--a COmplex PAthway SImulator

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS659

The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS659

Software that goes with the flow in systems biology

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS659

Multilevel complexity of calcium signaling: Modeling angiogenesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS659

BioModels Database: a free, centralized database of curated, published, quantitative kinetic models of biochemical and cellular systems

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS659

A hybrid approach to multi-scale modelling of cancer

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS659

Angiogenesis and vascular remodelling in normal and cancerous tissues.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS659

Exploring hypotheses of the actions of TGF-beta1 in epidermal wound healing using a 3D computational multiscale model of the human epidermis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS659

Multicell simulations of development and disease using the CompuCell3D simulation environment

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS659

Modeling multi-cellular behavior in epidermal tissue homeostasis via finite state machines in multi-agent systems

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS659

Modeling the cell division cycle: cdc2 and cyclin interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS659

Chaste: A test-driven approach to software development for biological modelling

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS659

10.1093/BIOINFORMATICS/BTS659

21 January 2018

Identifiers

DOI

1 reference

journals/bioinformatics/SutterlinKDJG13

3 September 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference