(Q38463133)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25976351%20AND%20SRC:MED&resulttype=core&format=json

8 March 2020

title

Genome-Wide Dosage-Dependent and -Independent Regulation Contributes to Gene Expression and Evolutionary Novelty in Plant Polyploids (English)

1 reference

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8 March 2020

1 reference

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3

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8 March 2020

author name string

Xiaoli Shi

series ordinal

1

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25976351%20AND%20SRC:MED&resulttype=core&format=json

8 March 2020

Changqing Zhang

series ordinal

2

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8 March 2020

Z Jeffrey Chen

series ordinal

4

1 reference

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8 March 2020

publication date

14 May 2015

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25976351%20AND%20SRC:MED&resulttype=core&format=json

Molecular Biology and Evolution

8 March 2020

published in

1 reference

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8 March 2020

volume

32

1 reference

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8 March 2020

issue

9

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8 March 2020

page(s)

2351-2366

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25976351%20AND%20SRC:MED&resulttype=core&format=json

Genes duplicated by polyploidy show unequal contributions to the transcriptome and organ-specific reciprocal silencing

8 March 2020

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Dosage balance in gene regulation: biological implications

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Unravelling angiosperm genome evolution by phylogenetic analysis of chromosomal duplication events

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Transcriptomic shock generates evolutionary novelty in a newly formed, natural allopolyploid plant

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A new multitest correction (SGoF) that increases its statistical power when increasing the number of tests

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Polyploids exhibit higher potassium uptake and salinity tolerance in Arabidopsis

21 January 2018

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Genetic and epigenetic mechanisms for gene expression and phenotypic variation in plant polyploids

21 January 2018

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Genomic and epigenetic insights into the molecular bases of heterosis

21 January 2018

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Transcriptional analysis of nucleolar dominance in polyploid plants: biased expression/silencing of progenitor rRNA genes is developmentally regulated in Brassica

21 January 2018

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Quantifying whole transcriptome size, a prerequisite for understanding transcriptome evolution across species: an example from a plant allopolyploid

21 January 2018

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Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning

21 January 2018

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The advantages and disadvantages of being polyploid

21 January 2018

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FISH analysis of meiosis in Arabidopsis allopolyploids

21 January 2018

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Phenotypic instability and rapid gene silencing in newly formed arabidopsis allotetraploids.

21 January 2018

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Widespread dynamic DNA methylation in response to biotic stress

21 January 2018

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Origin and evolution of metabolic pathways

21 January 2018

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Plant transposable elements: where genetics meets genomics

21 January 2018

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Circadian control of carbohydrate availability for growth in Arabidopsis plants at night

21 January 2018

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miR828 and miR858 regulate homoeologous MYB2 gene functions in Arabidopsis trichome and cotton fibre development

21 January 2018

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The ethylene signaling pathway: new insights

21 January 2018

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Small RNAs serve as a genetic buffer against genomic shock in Arabidopsis interspecific hybrids and allopolyploids

21 January 2018

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Coordinated histone modifications are associated with gene expression variation within and between species

21 January 2018

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Transposable elements and small RNAs contribute to gene expression divergence between Arabidopsis thaliana and Arabidopsis lyrata

21 January 2018

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Regulation of heterochromatic DNA replication by histone H3 lysine 27 methyltransferases.

21 January 2018

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Translating the Histone Code

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV116

Ancestral polyploidy in seed plants and angiosperms

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV116

Chromosome painting using repetitive DNA sequences as probes for somatic chromosome identification in maize

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV116

Genomic plasticity and the diversity of polyploid plants

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV116

The role of chromatin during transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV116

Highly integrated single-base resolution maps of the epigenome in Arabidopsis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV116

Integrative analysis of chromatin states in Arabidopsis identified potential regulatory mechanisms for natural antisense transcript production

21 January 2018

1 reference

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Recently formed polyploid plants diversify at lower rates

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV116

Ploidy and Hybridity Effects on Growth Vigor and Gene Expression in Arabidopsis thaliana Hybrids and Their Parents

21 January 2018

1 reference

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Mapping and quantifying mammalian transcriptomes by RNA-Seq

21 January 2018

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AraCyc: a biochemical pathway database for Arabidopsis

21 January 2018

1 reference

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cis- and trans-Regulation of miR163 and target genes confers natural variation of secondary metabolites in two Arabidopsis species and their allopolyploids.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV116

Altered circadian rhythms regulate growth vigour in hybrids and allopolyploids

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV116

Aneuploidy confers quantitative proteome changes and phenotypic variation in budding yeast

21 January 2018

1 reference

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Global transgenerational gene expression dynamics in two newly synthesized allohexaploid wheat (Triticum aestivum) lines

21 January 2018

1 reference

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A transcriptomic hourglass in plant embryogenesis

21 January 2018

1 reference

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Neopolyploidy in Flowering Plants

21 January 2018

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An abundance of ubiquitously expressed genes revealed by tissue transcriptome sequence data

21 January 2018

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Cis- and trans-regulatory divergence between progenitor species determines gene-expression novelty in Arabidopsis allopolyploids.

21 January 2018

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The polyploidy revolution then…and now: Stebbins revisited

21 January 2018

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The role of hybridization in plant speciation

21 January 2018

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Epigenetic and developmental regulation in plant polyploids

21 January 2018

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From polyploidy to aneuploidy, genome instability and cancer

21 January 2018

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The evolutionary origin of orphan genes

21 January 2018

1 reference

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Following tetraploidy in an Arabidopsis ancestor, genes were removed preferentially from one homeolog leaving clusters enriched in dose-sensitive genes

21 January 2018

1 reference

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The evolutionary significance of ancient genome duplications

21 January 2018

1 reference

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Cellular reactions to gene dosage imbalance: genomic, transcriptomic and proteomic effects

21 January 2018

1 reference

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The origins of genomic duplications in Arabidopsis.

21 January 2018

1 reference

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Genomewide nonadditive gene regulation in Arabidopsis allotetraploids

21 January 2018

1 reference

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Genome evolution in polyploids

21 January 2018

2 references

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV116

21 January 2018

12 December 2020

Aneuploidy affects proliferation and spontaneous immortalization in mammalian cells

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV116

The frequency of polyploid speciation in vascular plants

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV116

BSMAP: whole genome bisulfite sequence MAPping program

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV116

The Arabidopsis nucleosome remodeler DDM1 allows DNA methyltransferases to access H1-containing heterochromatin

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV116

Whole-genome analysis of histone H3 lysine 27 trimethylation in Arabidopsis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV116

Genome-wide high-resolution mapping and functional analysis of DNA methylation in arabidopsis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV116

Copy-number variation: the balance between gene dosage and expression in Drosophila melanogaster.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV116

Methods for comparing Salmonella mutagenicity data sets using nonlinear models

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV116

High levels of chromosome instability in polyploids of Saccharomyces cerevisiae

21 January 2018

1 reference

12 December 2020

Transcriptome shock after interspecific hybridization in senecio is ameliorated by genome duplication

1 reference

12 December 2020

Cytogenetic analyses of Arabidopsis

1 reference

12 December 2020

The probability of preservation of a newly arisen gene duplicate

1 reference

12 December 2020

The probability of duplicate gene preservation by subfunctionalization

1 reference

12 December 2020

Ploidy regulation of gene expression

1 reference

12 December 2020

The epigenetic landscape of plants

1 reference

12 December 2020

Identifiers

DOI

10.1093/MOLBEV/MSV116

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25976351%20AND%20SRC:MED&resulttype=core&format=json

8 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25976351%20AND%20SRC:MED&resulttype=core&format=json

8 March 2020

PubMed publication ID

25976351

1 reference