(Q38538725)

3 September 2017

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title

Epigenetics as an emerging tool for improvement of fungal strains used in biotechnology (English)

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3 September 2017

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Razieh Karimi Aghcheh

series ordinal

1

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3 September 2017

Christian P Kubicek

series ordinal

2

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3 September 2017

language of work or name

English

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publication date

27 June 2015

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Applied Microbiology and Biotechnology

3 September 2017

published in

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3 September 2017

volume

99

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3 September 2017

issue

15

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3 September 2017

page(s)

6167-6181

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Methylation of histone H3 lysine 36 is required for normal development in Neurospora crassa

3 September 2017

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21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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Aspects on evolution of fungal beta-lactam biosynthesis gene clusters and recruitment of trans-acting factors.

21 January 2018

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21 January 2018

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21 January 2018

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An epigenetic modifier enhances the production of anti-diabetic and anti-inflammatory sesquiterpenoids from Aspergillus sydowii.

21 January 2018

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Esa1p is an essential histone acetyltransferase required for cell cycle progression

21 January 2018

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The Fusarium graminearum histone H3 K27 methyltransferase KMT6 regulates development and expression of secondary metabolite gene clusters

21 January 2018

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RNA interference in fungi: pathways, functions, and applications

21 January 2018

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Fungal bioconversion of lignocellulosic residues; opportunities & perspectives

21 January 2018

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A single dicer gene is required for efficient gene silencing associated with two classes of small antisense RNAs in Mucor circinelloides

21 January 2018

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Uncovering the genome-wide transcriptional responses of the filamentous fungus Aspergillus niger to lignocellulose using RNA sequencing

21 January 2018

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Natural antisense transcripts in fungi

21 January 2018

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A homologue of the Aspergillus velvet gene regulates both cephalosporin C biosynthesis and hyphal fragmentation in Acremonium chrysogenum

21 January 2018

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21 January 2018

RNAi in budding yeast

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Complex Loci in human and mouse genomes

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

The transcriptome of lae1 mutants of Trichoderma reesei cultivated at constant growth rates reveals new targets of LAE1 function.

21 January 2018

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A cytosine methyltransferase homologue is essential for repeat-induced point mutation in Neurospora crassa

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

HP1 is essential for DNA methylation in neurospora

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

Roles of the Aspergillus nidulans homologues of Tup1 and Ssn6 in chromatin structure and cell viability.

21 January 2018

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Decapping of long noncoding RNAs regulates inducible genes.

21 January 2018

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Small silencing RNAs: an expanding universe

21 January 2018

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Screening of candidate regulators for cellulase and hemicellulase production in Trichoderma reesei and identification of a factor essential for cellulase production

21 January 2018

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RNA interference machinery regulates chromosome dynamics during mitosis and meiosis in fission yeast

21 January 2018

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Interplay of the fungal sumoylation network for control of multicellular development.

21 January 2018

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Jack of all nectars, master of most: DNA methylation and the epigenetic basis of niche width in a flower-living yeast

21 January 2018

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Epigenetics and transgenerational transfer: a physiological perspective

21 January 2018

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Epigenetics and the maintenance of gene activity states in Caenorhabditis elegans

21 January 2018

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Two components of a velvet-like complex control hyphal morphogenesis, conidiophore development, and penicillin biosynthesis in Penicillium chrysogenum

21 January 2018

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Direct interaction between DNA methyltransferase DIM-2 and HP1 is required for DNA methylation in Neurospora crassa

21 January 2018

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Heterochromatin protein 1 forms distinct complexes to direct histone deacetylation and DNA methylation

21 January 2018

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A ncRNA modulates histone modification and mRNA induction in the yeast GAL gene cluster

21 January 2018

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Is the fungus Magnaporthe losing DNA methylation?

21 January 2018

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Characterizing the role of RNA silencing components in Cryptococcus neoformans

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

Evidence for Dicer-dependent RNA interference in the industrial penicillin producer Penicillium chrysogenum.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

The epigenomics of cancer

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

One of the two Dicer-like proteins in the filamentous fungi Magnaporthe oryzae genome is responsible for hairpin RNA-triggered RNA silencing and related small interfering RNA accumulation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

Long noncoding RNA and epigenomics.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

Functional analyses of Trichoderma reesei LAE1 reveal conserved and contrasting roles of this regulator

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

The VELVET A orthologue VEL1 of Trichoderma reesei regulates fungal development and is essential for cellulase gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

Antisense transcription in the mammalian transcriptome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

Members of the Penicillium chrysogenum velvet complex play functionally opposing roles in the regulation of penicillin biosynthesis and conidiation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

The global regulator LaeA controls penicillin biosynthesis, pigmentation and sporulation, but not roquefortine C synthesis in Penicillium chrysogenum

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

dim-2 encodes a DNA methyltransferase responsible for all known cytosine methylation in Neurospora

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

The Paf1 complex is required for histone H3 methylation by COMPASS and Dot1p: linking transcriptional elongation to histone methylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

Comparative genome sequence analysis underscores mycoparasitism as the ancestral life style of Trichoderma

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

Diverse pathways generate microRNA-like RNAs and Dicer-independent small interfering RNAs in fungi

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

Strain improvement by overexpression of the laeA gene in Monascus pilosus for the production of monascus-fermented rice

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

A gene essential for de novo methylation and development in Ascobolus reveals a novel type of eukaryotic DNA methyltransferase structure

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

New improvements for lignocellulosic ethanol

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

High-quality genome (re)assembly using chromosomal contact data

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

Characterization of an autoinducer of penicillin biosynthesis in Penicillium chrysogenum.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

Genome sequencing and analysis of the biomass-degrading fungus Trichoderma reesei (syn. Hypocrea jecorina)

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

5-methylcytosine in RNA: detection, enzymatic formation and biological functions

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

Histone sumoylation is a negative regulator in Saccharomyces cerevisiae and shows dynamic interplay with positive-acting histone modifications

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

Transitions in distinct histone H3 methylation patterns at the heterochromatin domain boundaries

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

Aspergillus oryzae laeA regulates kojic acid synthesis genes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

A novel automethylation reaction in the Aspergillus nidulans LaeA protein generates S-methylmethionine.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

5-Methylcytosine is not detectable in Saccharomyces cerevisiae DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

Epigenetics and complex disease: from etiology to new therapeutics

21 January 2018

1 reference

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How to activate a gene: decap its associated noncoding RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

Chromatin and transcription in yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

DNA methylation and mammalian epigenetics

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

Heterochromatic marks are associated with the repression of secondary metabolism clusters in Aspergillus nidulans

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

Genome-wide transcriptional response of Trichoderma reesei to lignocellulose using RNA sequencing and comparison with Aspergillus niger

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

Rad6-dependent ubiquitination of histone H2B in yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

Quelling: transient inactivation of gene expression in Neurospora crassa by transformation with homologous sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

One Juliet and four Romeos: VeA and its methyltransferases.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

The VELVET Complex in the Gray Mold Fungus Botrytis cinerea: Impact of BcLAE1 on Differentiation, Secondary Metabolism, and Virulence.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

The putative protein methyltransferase LAE1 controls cellulase gene expression in Trichoderma reesei.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

Premeiotic instability of repeated sequences in Neurospora crassa

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

Rearrangement of duplicated DNA in specialized cells of Neurospora

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

Involvement of transposon-like elements in penicillin gene cluster regulation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

Fungal genome sequencing: basic biology to biotechnology

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

Histone sumoylation is associated with transcriptional repression

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

Open reading frames provide a rich pool of potential natural antisense transcripts in fungal genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

Acetylation of histones and transcription-related factors

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

The language of covalent histone modifications

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

Highly specific antibodies determine histone acetylation site usage in yeast heterochromatin and euchromatin

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

Hydrolysis of lignocellulosic materials for ethanol production: a review

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

High-Frequency Conversion to a “Fluffy” Developmental Phenotype in Aspergillus spp. by 5-Azacytidine Treatment: Evidence for Involvement of a Single Nuclear Gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

A histone H3 methyltransferase controls DNA methylation in Neurospora crassa

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

Synthesis of signals for de novo DNA methylation in Neurospora crassa

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

Widespread existence of cytosine methylation in yeast DNA measured by gas chromatography/mass spectrometry.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

The Aspergillus nidulans rcoA gene is required for veA-dependent sexual development

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

Impact of the Penicillium chrysogenum genome on industrial production of metabolites

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

Genome sequencing and analysis of the filamentous fungus Penicillium chrysogenum

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

Substrate-induced transcriptional activation of the MoCel7C cellulase gene is associated with methylation of histone H3 at lysine 4 in the rice blast fungus Magnaporthe oryzae

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

Impact of velvet complex on transcriptome and penicillin G production in glucose-limited chemostat cultures of a β-lactam high-producing Penicillium chrysogenum strain.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

Molecular mechanisms of long noncoding RNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

Genome-wide prediction and identification of cis-natural antisense transcripts in Arabidopsis thaliana

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

Genomic patterns of DNA methylation: targets and function of an epigenetic mark

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

Cross-talking histones: implications for the regulation of gene expression and DNA repair

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

Mechanisms and functions of Tet protein-mediated 5-methylcytosine oxidation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

Characterization of chromosome ends in the filamentous fungus Neurospora crassa

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

Trichoderma reesei histone acetyltransferase Gcn5 regulates fungal growth, conidiation, and cellulase gene expression.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

Acetylation in histone H3 globular domain regulates gene expression in yeast.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

Perspectives and new directions for the production of bioethanol using consolidated bioprocessing of lignocellulose

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

Aspergillus oryzae-based cell factory for direct kojic acid production from cellulose.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

Isolation and identification of novel propoxyphenyl thiosildenafil found in natural health food product.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

Nucleosome transactions on the Hypocrea jecorina (Trichoderma reesei) cellulase promoter cbh2 associated with cellulase induction

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

Small chemical chromatin effectors alter secondary metabolite production in Aspergillus clavatus

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

Role for antisense RNA in regulating circadian clock function in Neurospora crassa

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-015-6763-2

10.1007/S00253-015-6763-2

21 January 2018

Identifiers

DOI

1 reference

Dimensions Publication ID

3 September 2017

1047989169

0 references

1 reference