(Q38552939)

English

Modelling the secondary structures of slippage-prone hypervariable RNA regions: the example of the tiger beetle 18S rRNA variable region V4.

scientific article published on April 1998

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

4 September 2017

Modelling the secondary structures of slippage-prone hypervariable RNA regions: the example of the tiger beetle 18S rRNA variable region V4. (English)

1 reference

Europe PubMed Central

PMC publication ID

4 September 2017

John M. Hancock

1

1 reference

Europe PubMed Central

PMC publication ID

4 September 2017

author name string

Vogler AP

2

1 reference

Europe PubMed Central

PMC publication ID

4 September 2017

language of work or name

0 references

publication date

1 April 1998

1 reference

Europe PubMed Central

PMC publication ID

4 September 2017

Nucleic Acids Research

1 reference

Europe PubMed Central

PMC publication ID

4 September 2017

26

1 reference

Europe PubMed Central

PMC publication ID

4 September 2017

7

1 reference

Europe PubMed Central

PMC publication ID

4 September 2017

1689-1699

1 reference

Europe PubMed Central

PMC publication ID

4 September 2017

The RDP (Ribosomal Database Project).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147449

6 September 2017

Phylogenetic analysis of slippage-like sequence variation in the V4 rRNA expansion segment in tiger beetles (Cicindelidae).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147449

6 September 2017

A molecular phylogeny of the tiger beetles (Cicindelidae): congruence of mitochondrial and nuclear rDNA data sets

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147449

6 September 2017

Replication slippage in the evolution of potyviruses

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147449

6 September 2017

Conserved sequence motifs, alignment, and secondary structure for the third domain of animal 12S rRNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147449

6 September 2017

Generation of VNTRs and heteroplasmy by sequence turnover in the mitochondrial control region of two elephant seal species

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147449

6 September 2017

Rates and patterns of base change in the small subunit ribosomal RNA gene.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147449

6 September 2017

Lessons from an evolving rRNA: 16S and 23S rRNA structures from a comparative perspective.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147449

6 September 2017

Primary and secondary structure of the 18 S ribosomal RNA of the insect speciesTenebrio molitor

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147449

6 September 2017

On finding all suboptimal foldings of an RNA molecule

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147449

6 September 2017

An overview of the secondary structure of the V4 region of eukaryotic small-subunit ribosomal RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147449

6 September 2017

The longest 18S ribosomal RNA ever known. Nucleotide sequence and presumed secondary structure of the 18S rRNA of the pea aphid, Acyrthosiphon pisum

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147449

6 September 2017

A comparison of optimal and suboptimal RNA secondary structures predicted by free energy minimization with structures determined by phylogenetic comparison

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147449

6 September 2017

The product of the mouse Xist gene is a 15 kb inactive X-specific transcript containing no conserved ORF and located in the nucleus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147449

6 September 2017

Compilation of small ribosomal subunit RNA sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147449

6 September 2017

A proposal for the secondary structure of a variable area of eukaryotic small ribosomal subunit RNA involving the existence of a pseudoknot

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147449

14 September 2017

Molecular coevolution among cryptically simple expansion segments of eukaryotic 26S/28S rRNAs.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147449

23 June 2018

Evolution of the secondary structures and compensatory mutations of the ribosomal RNAs of Drosophila melanogaster.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147449

23 June 2018

Complete sequences of the rRNA genes of Drosophila melanogaster.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147449

23 June 2018

17 Predicting optimal and suboptimal secondary structure for RNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147449

23 June 2018

Comprehensive comparison of structural characteristics in eukaryotic cytoplasmic large subunit (23 S-like) ribosomal RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147449

31 August 2018

The contribution of DNA slippage to eukaryotic nuclear 18S rRNA evolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147449

31 August 2018

Database on the structure of small ribosomal subunit RNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/9512540

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Prediction of RNA secondary structure by energy minimization

1 reference

https://pubmed.ncbi.nlm.nih.gov/9512540

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/NAR/26.7.1689

1 reference

Europe PubMed Central

PMC publication ID

4 September 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

4 September 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

4 September 2017

ResearchGate publication ID

0 references

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