(Q38581456)

4 September 2017

An energy model that predicts the correct folding of both the tRNA and the 5S RNA molecules (English)

1 reference

4 September 2017

Papanicolaou C

1

1 reference

4 September 2017

Gouy M

series ordinal

2

1 reference

4 September 2017

Ninio J

series ordinal

3

1 reference

4 September 2017

language of work or name

English

0 references

publication date

1 January 1984

1 reference

4 September 2017

Nucleic Acids Research

1 reference

4 September 2017

12

1 reference

4 September 2017

1 Pt 1

1 reference

4 September 2017

31-44

1 reference

Small changes in free energy assignments for unpaired bases do not affect predicted secondary structures in single stranded RNA.

4 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=320981

Secondary structure of eukaryotic cytoplasmic 5S ribosomal RNA

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=320981

Physical and biological features of polyoma virus mutants able to infect embryonal carcinoma cell lines

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=320981

Three-dimensional structural model of eubacterial 5S RNA that has functional implications

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=320981

Computer-aided prediction of RNA secondary structures

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=320981

A unique secondary folding pattern for 5S RNA corresponds to the lowest energy homologous secondary structure in 17 different prokaryotes

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=320981

Optimal computer folding of large RNA sequences using thermodynamics and auxiliary information

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=320981

Fast algorithm for predicting the secondary structure of single-stranded RNA

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=320981

Improved Estimation of Secondary Structure in Ribonucleic Acids

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=320981

Evolutionary change in 5S RNA secondary structure and a phylogenic tree of 54 5S RNA species

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=320981

Computer method for predicting the secondary structure of single-stranded RNA

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=320981

The sequence of the 5.8 S ribosomal RNA of the crustacean Artemia salina. With a proposal for a general secondary structure model for 5.8 S ribosomal RNA.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=320981

The ten helical twist angles of B-DNA.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=320981

Collection of published 5S and 5.8S ribosomal RNA sequences

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=320981

Efficient algorithms for folding and comparing nucleic acid sequences

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=320981

Participation of Modified Nucleosides in Translation and Transcription

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=320981

Prediction of pairing schemes in RNA molecules-loop contributions and energy of wobble and non-wobble pairs

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=320981

Globin mRNA Sequences: Analysis of Base Pairing and Evolutionary Implications

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=320981

Comparison of fungal mitochondrial introns reveals extensive homologies in RNA secondary structure

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=320981

Free energy of imperfect nucleic acid helices. 3. Small internal loops resulting from mismatches.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=320981

Nucleotide sequence of 5 S RNA from Torulopsis utilis

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=320981

Determination of the secondary structure of Drosophila melanogaster 5 S RNA by hydroxymethyltrimethylpsoralen crosslinking.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=320981

Polynucleotide analogues. VII. Methylation of polynucleotides

31 August 2018

1 reference

12 December 2020

Self base pairing in a complementary deoxydinucleoside monophosphate duplex: crystal and molecular structure of deoxycytidylyl-(3'-5')-deoxyguanosine

1 reference

12 December 2020

Properties of nucleic acid representations. I. Topology

1 reference

12 December 2020

Free energy of imperfect nucleic acid helices. I. The bulge defect

1 reference

12 December 2020

Polynucleotides. XV. Synthesis and properties of polynucleotides containing N 2 -dimethylguanylic acid residues in polyinosinate and polyadenylate chains

1 reference

12 December 2020

5S RNA secondary structure

1 reference

12 December 2020

High-resolution NMR studies of A- and G-containing oligonucleotides

1 reference

12 December 2020

Computer building and folding of fictitious transfer-RNA sequences

1 reference

12 December 2020

A model for base overlap in RNA

1 reference

12 December 2020

The effects of base sequence and dangling bases on the stability of short ribonucleic acid duplexes

1 reference

12 December 2020

Kinetics for exchange of imino protons in the d(C-G-C-G-A-A-T-T-C-G-C-G) double helix and in two similar helices that contain a G.cntdot.T base pair, d(C-G-T-G-A-A-T-T-C-G-C-G), and an extra adenine, d(C-G-C-A-G-A-A-T-T-C-G-C-G)

1 reference

12 December 2020

Tertiary structure of the eukaryotic ribosomal 5 S RNA. Accessibility of phosphodiester bonds to ethylnitrosourea modification

1 reference

12 December 2020

Self-complementary oligoribonucleotides: Adenylic acid-uridylic acid block copolymers

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/12.1PART1.31

1 reference

journals/nar/PapanicolaouGN84

4 September 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

4 September 2017

PubMed publication ID

6694903

1 reference