(Q38637165)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28783155%20AND%20SRC:MED&resulttype=core&format=json

26 March 2020

title

histoCAT: analysis of cell phenotypes and interactions in multiplex image cytometry data (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28783155%20AND%20SRC:MED&resulttype=core&format=json

26 March 2020

main subject

imaging mass cytometry

0 references

author

Hartland W Jackson

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28783155%20AND%20SRC:MED&resulttype=core&format=json

26 March 2020

Denis Schapiro

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28783155%20AND%20SRC:MED&resulttype=core&format=json

26 March 2020

Swetha Raghuraman

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28783155%20AND%20SRC:MED&resulttype=core&format=json

26 March 2020

Jana R Fischer

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28783155%20AND%20SRC:MED&resulttype=core&format=json

26 March 2020

Vito R T Zanotelli

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28783155%20AND%20SRC:MED&resulttype=core&format=json

26 March 2020

Raúl Catena

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28783155%20AND%20SRC:MED&resulttype=core&format=json

26 March 2020

Bernd Bodenmiller

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28783155%20AND%20SRC:MED&resulttype=core&format=json

26 March 2020

author name string

Daniel Schulz

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28783155%20AND%20SRC:MED&resulttype=core&format=json

26 March 2020

Charlotte Giesen

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28783155%20AND%20SRC:MED&resulttype=core&format=json

26 March 2020

Zsuzsanna Varga

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28783155%20AND%20SRC:MED&resulttype=core&format=json

26 March 2020

publication date

7 August 2017

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28783155%20AND%20SRC:MED&resulttype=core&format=json

26 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28783155%20AND%20SRC:MED&resulttype=core&format=json

26 March 2020

volume

14

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28783155%20AND%20SRC:MED&resulttype=core&format=json

26 March 2020

issue

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28783155%20AND%20SRC:MED&resulttype=core&format=json

26 March 2020

page(s)

873-876

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28783155%20AND%20SRC:MED&resulttype=core&format=json

describes a project that uses

26 March 2020

imaging mass cytometry

0 references

exact match

https://scigraph.springernature.com/pub.10.1038/nmeth.4391

0 references

cites work

Comparison of clustering methods for high-dimensional single-cell flow and mass cytometry data.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5617107

AirLab: a cloud-based platform to manage and share antibody-based single-cell research

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5617107

Multiplexed Epitope-Based Tissue Imaging for Discovery and Healthcare Applications

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5617107

Dissecting the multicellular ecosystem of metastatic melanoma by single-cell RNA-seq

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5617107

Highly multiplexed imaging of single cells using a high-throughput cyclic immunofluorescence method.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5617107

GRAPHIE: graph based histology image explorer

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5617107

Tumorigenesis: it takes a village

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5617107

Automatic single cell segmentation on highly multiplexed tissue images.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5617107

Data-Driven Phenotypic Dissection of AML Reveals Progenitor-like Cells that Correlate with Prognosis

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5617107

RNA imaging. Spatially resolved, highly multiplexed RNA profiling in single cells

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5617107

Macrophages and cancer: from mechanisms to therapeutic implications

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5617107

Highly multiplexed imaging of tumor tissues with subcellular resolution by mass cytometry

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5617107

Multiplexed ion beam imaging of human breast tumors

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5617107

Highly multiplexed subcellular RNA sequencing in situ

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5617107

Automatic Classification of Cellular Expression by Nonlinear Stochastic Embedding (ACCENSE).

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5617107

Fast chemical imaging at high spatial resolution by laser ablation inductively coupled plasma mass spectrometry.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5617107

Highly multiplexed single-cell analysis of formalin-fixed, paraffin-embedded cancer tissue

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5617107

viSNE enables visualization of high dimensional single-cell data and reveals phenotypic heterogeneity of leukemia

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5617107

Multiplexed mass cytometry profiling of cellular states perturbed by small-molecule regulators

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5617107

Single-cell mass cytometry of differential immune and drug responses across a human hematopoietic continuum

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5617107

CellProfiler Analyst: data exploration and analysis software for complex image-based screens

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5617107

Analyzing proteome topology and function by automated multidimensional fluorescence microscopy

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5617107

Tissue microarrays for high-throughput molecular profiling of tumor specimens

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5617107

Social network architecture of human immune cells unveiled by quantitative proteomics

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5617107

Systematic analysis of breast cancer morphology uncovers stromal features associated with survival.

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5617107

Using epigenomics data to predict gene expression in lung cancer

31 August 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNMETH.4391

21 January 2018

Identifiers

DOI

10.1038/NMETH.4391

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28783155%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

26 March 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28783155%20AND%20SRC:MED&resulttype=core&format=json

26 March 2020

PubMed publication ID

28783155

1 reference