(Q38830283)

English

Rumen Bacterial Community Composition in Holstein and Jersey Cows Is Different under Same Dietary Condition and Is Not Affected by Sampling Method

scientific article published on 3 August 2016

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

6 September 2017

Rumen Bacterial Community Composition in Holstein and Jersey Cows Is Different under Same Dietary Condition and Is Not Affected by Sampling Method (English)

1 reference

Europe PubMed Central

PMC publication ID

6 September 2017

Christopher L Anderson

2

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27536291%20AND%20SRC:MED&resulttype=core&format=json

12 June 2020

author name string

Henry A Paz

1

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27536291%20AND%20SRC:MED&resulttype=core&format=json

12 June 2020

Makala J Muller

3

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27536291%20AND%20SRC:MED&resulttype=core&format=json

12 June 2020

Paul J Kononoff

4

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27536291%20AND%20SRC:MED&resulttype=core&format=json

12 June 2020

Samodha C Fernando

5

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27536291%20AND%20SRC:MED&resulttype=core&format=json

12 June 2020

publication date

3 August 2016

1 reference

Europe PubMed Central

PMC publication ID

6 September 2017

Frontiers in Microbiology

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27536291%20AND%20SRC:MED&resulttype=core&format=json

12 June 2020

7

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27536291%20AND%20SRC:MED&resulttype=core&format=json

12 June 2020

1206

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27536291%20AND%20SRC:MED&resulttype=core&format=json

12 June 2020

Effects of vendor and genetic background on the composition of the fecal microbiota of inbred mice

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4971436

9 September 2017

Prepartum and postpartum rumen fluid microbiomes: characterization and correlation with production traits in dairy cows

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4971436

9 September 2017

High-throughput Methods Redefine the Rumen Microbiome and Its Relationship with Nutrition and Metabolism

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4971436

9 September 2017

Gastrointestinal tract size, total-tract digestibility, and rumen microflora in different dairy cow genotypes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4971436

9 September 2017

Potential role of the bovine rumen microbiome in modulating milk composition and feed efficiency

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4971436

9 September 2017

UPARSE: highly accurate OTU sequences from microbial amplicon reads

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4971436

9 September 2017

Short communication: Comparison of pH, volatile fatty acids, and microbiome of rumen samples from preweaned calves obtained via cannula or stomach tube.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4971436

9 September 2017

Exploring the bovine rumen bacterial community from birth to adulthood

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4971436

9 September 2017

Microbial 16S rRNA Ion Tag and community metagenome sequencing using the Ion Torrent (PGM) Platform

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4971436

9 September 2017

Murine gut microbiota is defined by host genetics and modulates variation of metabolic traits

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4971436

9 September 2017

Analysis of genetic diversity in Brown Swiss, Jersey and Holstein populations using genome-wide single nucleotide polymorphism markers

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4971436

9 September 2017

Impact of feed efficiency and diet on adaptive variations in the bacterial community in the rumen fluid of cattle

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4971436

9 September 2017

An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4971436

9 September 2017

Metagenomic biomarker discovery and explanation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4971436

9 September 2017

UCHIME improves sensitivity and speed of chimera detection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4971436

9 September 2017

Microbiome analysis of dairy cows fed pasture or total mixed ration diets.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4971436

9 September 2017

Individuality in gut microbiota composition is a complex polygenic trait shaped by multiple environmental and host genetic factors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4971436

9 September 2017

UniFrac: an effective distance metric for microbial community comparison

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4971436

9 September 2017

QIIME allows analysis of high-throughput community sequencing data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4971436

9 September 2017

Ironing out the wrinkles in the rare biosphere through improved OTU clustering

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4971436

9 September 2017

Site and strain-specific variation in gut microbiota profiles and metabolism in experimental mice

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4971436

9 September 2017

Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4971436

9 September 2017

Comparative analysis of microbial profiles in cow rumen fed with different dietary fiber by tagged 16S rRNA gene pyrosequencing.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4971436

17 June 2018

Bovine acidosis: implications on laminitis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4971436

17 June 2018

Effects of partial mixed rations and supplement amounts on milk production and composition, ruminal fermentation, bacterial communities, and ruminal acidosis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4971436

22 August 2018

A comparison of the environmental impact of Jersey compared with Holstein milk for cheese production

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4971436

22 August 2018

Technical note: Bacterial diversity and fermentation end products in rumen fluid samples collected via oral lavage or rumen cannula

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4971436

22 August 2018

Comparison of techniques for measurement of rumen pH in lactating dairy cows

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4971436

22 August 2018

Genotype Is a Stronger Determinant than Sex of the Mouse Gut Microbiota

1 reference

https://api.crossref.org/works/10.3389%2FFMICB.2016.01206

21 January 2018

Quantitative PCR assays for mouse enteric flora reveal strain-dependent differences in composition that are influenced by the microenvironment

1 reference

https://pubmed.ncbi.nlm.nih.gov/27536291

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Randomised prospective study compares efficacy of five different stomach tubes for rumen fluid sampling in dairy cows

1 reference

https://pubmed.ncbi.nlm.nih.gov/27536291

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Insertion depth of oral stomach tubes may affect the fermentation parameters of ruminal fluid collected in dairy cows

1 reference

https://pubmed.ncbi.nlm.nih.gov/27536291

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Host specificity of the ruminal bacterial community in the dairy cow following near-total exchange of ruminal contents

1 reference

https://pubmed.ncbi.nlm.nih.gov/27536291

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

PCR-DGGE analysis reveals a distinct diversity in the bacterial population attached to the rumen epithelium

1 reference

https://pubmed.ncbi.nlm.nih.gov/27536291

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comparative grazing behavior of lactating Holstein-Friesian, Jersey, and Jersey x Holstein-Friesian dairy cows and its association with intake capacity and production efficiency

1 reference

https://pubmed.ncbi.nlm.nih.gov/27536291

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Phenotypic Characterization of Polysaccharidases Produced by Four Prevotella Type Strains

1 reference

https://pubmed.ncbi.nlm.nih.gov/27536291

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.3389/FMICB.2016.01206

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27536291%20AND%20SRC:MED&resulttype=core&format=json

12 June 2020

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27536291%20AND%20SRC:MED&resulttype=core&format=json

12 June 2020

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27536291%20AND%20SRC:MED&resulttype=core&format=json

12 June 2020

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