Home
Random
Nearby
Log in
Settings
Donate
About Wikidata
Disclaimers
Search
(Q38872302)
Watch
English
SNP-sites: rapid efficient extraction of SNPs from multi-FASTA alignments.
scientific article published on 29 April 2016
In more languages
edit
Statements
instance of
scholarly article
1 reference
stated in
Europe PubMed Central
PMC publication ID
5320690
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28348851%20AND%20SRC:MED&resulttype=core&format=json
retrieved
14 March 2020
title
SNP-sites: rapid efficient extraction of SNPs from multi-FASTA alignments
(English)
1 reference
stated in
Europe PubMed Central
PMC publication ID
5320690
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28348851%20AND%20SRC:MED&resulttype=core&format=json
retrieved
14 March 2020
author
Torsten Seemann
series ordinal
5
1 reference
stated in
Europe PubMed Central
PMC publication ID
5320690
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28348851%20AND%20SRC:MED&resulttype=core&format=json
retrieved
14 March 2020
Jacqueline A Keane
series ordinal
6
1 reference
stated in
Europe PubMed Central
PMC publication ID
5320690
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28348851%20AND%20SRC:MED&resulttype=core&format=json
retrieved
14 March 2020
author name string
Andrew J Page
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMC publication ID
5320690
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28348851%20AND%20SRC:MED&resulttype=core&format=json
retrieved
14 March 2020
Ben Taylor
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMC publication ID
5320690
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28348851%20AND%20SRC:MED&resulttype=core&format=json
retrieved
14 March 2020
Aidan J Delaney
series ordinal
3
1 reference
stated in
Europe PubMed Central
PMC publication ID
5320690
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28348851%20AND%20SRC:MED&resulttype=core&format=json
retrieved
14 March 2020
Jorge Soares
series ordinal
4
1 reference
stated in
Europe PubMed Central
PMC publication ID
5320690
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28348851%20AND%20SRC:MED&resulttype=core&format=json
retrieved
14 March 2020
Simon R Harris
series ordinal
7
1 reference
stated in
Europe PubMed Central
PMC publication ID
5320690
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28348851%20AND%20SRC:MED&resulttype=core&format=json
retrieved
14 March 2020
publication date
29 April 2016
1 reference
stated in
Europe PubMed Central
PMC publication ID
5320690
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28348851%20AND%20SRC:MED&resulttype=core&format=json
retrieved
14 March 2020
published in
Microbial genomics
1 reference
stated in
Europe PubMed Central
PMC publication ID
5320690
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28348851%20AND%20SRC:MED&resulttype=core&format=json
retrieved
14 March 2020
volume
2
1 reference
stated in
Europe PubMed Central
PMC publication ID
5320690
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28348851%20AND%20SRC:MED&resulttype=core&format=json
retrieved
14 March 2020
issue
4
1 reference
stated in
Europe PubMed Central
PMC publication ID
5320690
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28348851%20AND%20SRC:MED&resulttype=core&format=json
retrieved
14 March 2020
page(s)
e000056
1 reference
stated in
Europe PubMed Central
PMC publication ID
5320690
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28348851%20AND%20SRC:MED&resulttype=core&format=json
retrieved
14 March 2020
cites work
An integrated map of structural variation in 2,504 human genomes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5320690
retrieved
9 September 2017
Phylogeographical analysis of the dominant multidrug-resistant H58 clade of Salmonella Typhi identifies inter- and intracontinental transmission events
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5320690
retrieved
9 September 2017
Second-generation PLINK: rising to the challenge of larger and richer datasets
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5320690
retrieved
9 September 2017
Evolutionary pathway to increased virulence and epidemic group A Streptococcus disease derived from 3,615 genome sequences
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5320690
retrieved
9 September 2017
Dense genomic sampling identifies highways of pneumococcal recombination
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5320690
retrieved
9 September 2017
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5320690
retrieved
9 September 2017
MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5320690
retrieved
9 September 2017
PGDSpider: an automated data conversion tool for connecting population genetics and genomics programs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5320690
retrieved
9 September 2017
The variant call format and VCFtools
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5320690
retrieved
9 September 2017
FastTree 2--approximately maximum-likelihood trees for large alignments
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5320690
retrieved
9 September 2017
trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5320690
retrieved
9 September 2017
Multiple sequence alignment using ClustalW and ClustalX
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5320690
retrieved
9 September 2017
MUSCLE: multiple sequence alignment with high accuracy and high throughput
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5320690
retrieved
9 September 2017
Phylogeny-aware alignment with PRANK.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5320690
retrieved
22 August 2018
Identifiers
DOI
10.1099/MGEN.0.000056
1 reference
stated in
Europe PubMed Central
PMC publication ID
5320690
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28348851%20AND%20SRC:MED&resulttype=core&format=json
retrieved
14 March 2020
PMC publication ID
5320690
1 reference
stated in
Europe PubMed Central
PMC publication ID
5320690
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28348851%20AND%20SRC:MED&resulttype=core&format=json
retrieved
14 March 2020
PubMed publication ID
28348851
1 reference
stated in
Europe PubMed Central
PMC publication ID
5320690
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28348851%20AND%20SRC:MED&resulttype=core&format=json
retrieved
14 March 2020
Sitelinks
Wikipedia
(0 entries)
edit
Wikibooks
(0 entries)
edit
Wikinews
(0 entries)
edit
Wikiquote
(0 entries)
edit
Wikisource
(0 entries)
edit
Wikiversity
(0 entries)
edit
Wikivoyage
(0 entries)
edit
Wiktionary
(0 entries)
edit
Multilingual sites
(0 entries)
edit