(Q38970523)

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Improved bottom-up strategy to efficiently separate hypermodified histone peptides through ultra-HPLC separation on a bench top Orbitrap instrument

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scholarly article

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25073962%20AND%20SRC:MED&resulttype=core&format=json

11 March 2020

Improved bottom-up strategy to efficiently separate hypermodified histone peptides through ultra-HPLC separation on a bench top Orbitrap instrument (English)

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25073962%20AND%20SRC:MED&resulttype=core&format=json

11 March 2020

Tiziana Bonaldi

3

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25073962%20AND%20SRC:MED&resulttype=core&format=json

11 March 2020

author name string

Monica Soldi

1

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25073962%20AND%20SRC:MED&resulttype=core&format=json

11 March 2020

Alessandro Cuomo

2

1 reference

Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25073962%20AND%20SRC:MED&resulttype=core&format=json

11 March 2020

publication date

28 August 2014

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25073962%20AND%20SRC:MED&resulttype=core&format=json

11 March 2020

1 reference

Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25073962%20AND%20SRC:MED&resulttype=core&format=json

11 March 2020

14

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Europe PubMed Central

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11 March 2020

19

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Europe PubMed Central

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11 March 2020

2212-2225

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25073962%20AND%20SRC:MED&resulttype=core&format=json

11 March 2020

Crystal structure of the nucleosome core particle at 2.8 A resolution

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Chromatin Structure: A Repeating Unit of Histones and DNA

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Chromatin modifications and their function

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

An increasingly complex code

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Translating the Histone Code

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Defining an epigenetic code

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Histone H4-K16 acetylation controls chromatin structure and protein interactions

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Regulation of chromatin by histone modifications

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Chromatin structure and the inheritance of epigenetic information

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Readout of epigenetic modifications

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Combinatorial complexity in chromatin structure and function: revisiting the histone code

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Histones: annotating chromatin

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Readers of histone modifications

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Quantitative proteomic approaches to studying histone modifications.

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Quantitative proteomics for epigenetics.

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Proteomics in epigenetics: new perspectives for cancer research

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Mass spectrometry-based proteomics for the analysis of chromatin structure and dynamics.

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Proteomics in chromatin biology and epigenetics: Elucidation of post-translational modifications of histone proteins by mass spectrometry

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Characterization of histones and their post-translational modifications by mass spectrometry

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Identification and interrogation of combinatorial histone modifications.

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Breaking the histone code with quantitative mass spectrometry.

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

One-pot shotgun quantitative mass spectrometry characterization of histones

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Quantitative analysis of modified proteins and their positional isomers by tandem mass spectrometry: human histone H4.

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

H3R42me2a is a histone modification with positive transcriptional effects

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Identification of 67 histone marks and histone lysine crotonylation as a new type of histone modification

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Lysine succinylation and lysine malonylation in histones.

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

SILAC-based proteomic analysis to dissect the "histone modification signature" of human breast cancer cells

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

The proteomic investigation of chromatin functional domains reveals novel synergisms among distinct heterochromatin components

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Tandem mass spectrometry: dissociation of ions by collisional activation

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Peptide and protein sequence analysis by electron transfer dissociation mass spectrometry

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

The utility of ETD mass spectrometry in proteomic analysis

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

High throughput characterization of combinatorial histone codes

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Precision mapping of coexisting modifications in histone H3 tails from embryonic stem cells by ETD-MS/MS.

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Gene-specific characterization of human histone H2B by electron capture dissociation

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Precise characterization of human histones in the H2A gene family by top down mass spectrometry

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

High resolution electron transfer dissociation studies of unfractionated intact histones from murine embryonic stem cells using on-line capillary LC separation: determination of abundant histone isoforms and post-translational modifications

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Higher-energy C-trap dissociation for peptide modification analysis.

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Quantitative mass spectrometry of histones H3.2 and H3.3 in Suz12-deficient mouse embryonic stem cells reveals distinct, dynamic post-translational modifications at Lys-27 and Lys-36

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

A systematic investigation into the nature of tryptic HCD spectra

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Polycomb complexes in stem cells and embryonic development.

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Dynamic histone H3 methylation during gene induction: HYPB/Setd2 mediates all H3K36 trimethylation

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Spatial distribution of di- and tri-methyl lysine 36 of histone H3 at active genes

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

High-resolution profiling of histone methylations in the human genome

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

SIR2 modifies histone H4-K16 acetylation and affects superhelicity in the ARS region of plasmid chromatin in Saccharomyces cerevisiae.

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

The p150 and p60 subunits of chromatin assembly factor I: a molecular link between newly synthesized histones and DNA replication

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Conservation of deposition-related acetylation sites in newly synthesized histones H3 and H4.

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Reversible histone modification and the chromosome cell cycle

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Automated 20 kpsi RPLC-MS and MS/MS with Chromatographic Peak Capacities of 1000−1500 and Capabilities in Proteomics and Metabolomics

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

System-wide perturbation analysis with nearly complete coverage of the yeast proteome by single-shot ultra HPLC runs on a bench top Orbitrap

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Mass spectrometry-based proteomics using Q Exactive, a high-performance benchtop quadrupole Orbitrap mass spectrometer.

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Selective transcription in response to an inflammatory stimulus

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Protocol for micro-purification, enrichment, pre-fractionation and storage of peptides for proteomics using StageTips

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

A practical guide to the MaxQuant computational platform for SILAC-based quantitative proteomics

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Andromeda: a peptide search engine integrated into the MaxQuant environment

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

A combination of different mass spectroscopic techniques for the analysis of dynamic changes of histone modifications.

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Heritable chromatin structure: mapping "memory" in histones H3 and H4

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Precision proteomics: the case for high resolution and high mass accuracy

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

A quantitative atlas of histone modification signatures from human cancer cells

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Selective use of H4 acetylation sites in the yeast Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Histone acetylation and deacetylation: identification of acetylation and methylation sites of HeLa histone H4 by mass spectrometry

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Mass spectrometric quantification of acetylation at specific lysines within the amino-terminal tail of histone H4

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Deposition-related histone acetylation in micronuclei of conjugating Tetrahymena

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Quantitative proteomic analysis of post-translational modifications of human histones

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Lysine acetylation targets protein complexes and co-regulates major cellular functions

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Identification of novel histone post-translational modifications by peptide mass fingerprinting

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Requirement for the histone deacetylase Hdac3 for the inflammatory gene expression program in macrophages

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

A nucleosomal region important for ensuring proper interactions between the transcription elongation factor Spt16 and transcribed genes in Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Evaluation and optimization of mass spectrometric settings during data-dependent acquisition mode: focus on LTQ-Orbitrap mass analyzers

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Deep and highly sensitive proteome coverage by LC-MS/MS without prefractionation.

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Tissue-specific expression and post-translational modification of histone H3 variants

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

The genomic landscapes of inflammation.

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Latent enhancers activated by stimulation in differentiated cells

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400075

21 January 2018

Identifiers

10.1002/PMIC.201400075

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25073962%20AND%20SRC:MED&resulttype=core&format=json

11 March 2020

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25073962%20AND%20SRC:MED&resulttype=core&format=json

11 March 2020

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