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English
Fast and accurate de novo genome assembly from long uncorrected reads.
scientific article published on 18 January 2017
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scholarly article
1 reference
stated in
Europe PubMed Central
PMC publication ID
5411768
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28100585%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 April 2020
title
Fast and accurate de novo genome assembly from long uncorrected reads
(English)
1 reference
stated in
Europe PubMed Central
PMC publication ID
5411768
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28100585%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 April 2020
author
Mile Šikić
series ordinal
4
1 reference
stated in
Europe PubMed Central
PMC publication ID
5411768
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28100585%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 April 2020
author name string
Robert Vaser
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMC publication ID
5411768
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28100585%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 April 2020
Ivan Sović
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMC publication ID
5411768
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28100585%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 April 2020
Niranjan Nagarajan
series ordinal
3
1 reference
stated in
Europe PubMed Central
PMC publication ID
5411768
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28100585%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 April 2020
publication date
18 January 2017
1 reference
stated in
Europe PubMed Central
PMC publication ID
5411768
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28100585%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 April 2020
published in
Genome Research
1 reference
stated in
Europe PubMed Central
PMC publication ID
5411768
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28100585%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 April 2020
volume
27
1 reference
stated in
Europe PubMed Central
PMC publication ID
5411768
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28100585%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 April 2020
issue
5
1 reference
stated in
Europe PubMed Central
PMC publication ID
5411768
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28100585%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 April 2020
page(s)
737-746
1 reference
stated in
Europe PubMed Central
PMC publication ID
5411768
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28100585%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 April 2020
cites work
de novo assembly and population genomic survey of natural yeast isolates with the Oxford Nanopore MinION sequencer
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5411768
retrieved
17 June 2018
Canu: scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5411768
retrieved
17 June 2018
Phased diploid genome assembly with single-molecule real-time sequencing.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5411768
retrieved
17 June 2018
Real-time selective sequencing using nanopore technology
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5411768
retrieved
17 June 2018
Sparc: a sparsity-based consensus algorithm for long erroneous sequencing reads
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5411768
retrieved
17 June 2018
Evaluation of hybrid and non-hybrid methods for de novo assembly of nanopore reads
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5411768
retrieved
17 June 2018
Minimap and miniasm: fast mapping and de novo assembly for noisy long sequences
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5411768
retrieved
17 June 2018
Fast and sensitive mapping of nanopore sequencing reads with GraphMap
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5411768
retrieved
17 June 2018
A complete bacterial genome assembled de novo using only nanopore sequencing data
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5411768
retrieved
17 June 2018
Assembling large genomes with single-molecule sequencing and locality-sensitive hashing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5411768
retrieved
17 June 2018
Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5411768
retrieved
17 June 2018
Mapping single molecule sequencing reads using basic local alignment with successive refinement (BLASR): application and theory
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5411768
retrieved
17 June 2018
Multiple sequence alignment using partial order graphs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5411768
retrieved
17 June 2018
Using MUMmer to identify similar regions in large sequence sets.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5411768
retrieved
21 August 2018
Generating consensus sequences from partial order multiple sequence alignment graphs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5411768
retrieved
21 August 2018
Six-fold speed-up of Smith-Waterman sequence database searches using parallel processing on common microprocessors
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5411768
retrieved
21 August 2018
An improved algorithm for matching biological sequences.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5411768
retrieved
21 August 2018
Edlib: a C/C++ library for fast, exact sequence alignment using edit distance
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5411768
retrieved
21 August 2018
A fast bit-vector algorithm for approximate string matching based on dynamic programming
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1101%2FGR.214270.116
retrieved
21 January 2018
Identifiers
DOI
10.1101/GR.214270.116
1 reference
stated in
Europe PubMed Central
PMC publication ID
5411768
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28100585%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 April 2020
PMC publication ID
5411768
1 reference
stated in
Europe PubMed Central
PMC publication ID
5411768
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28100585%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 April 2020
PubMed publication ID
28100585
1 reference
stated in
Europe PubMed Central
PMC publication ID
5411768
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28100585%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 April 2020
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