(Q39024470)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18332122%20AND%20SRC:MED&resulttype=core&format=json

4 January 2020

title

Eukaryotic wobble uridine modifications promote a functionally redundant decoding system (English)

1 reference

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4 January 2020

author

Marcus J.O. Johansson

1

1 reference

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4 January 2020

Anders Byström

5

1 reference

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4 January 2020

author name string

Anders Esberg

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18332122%20AND%20SRC:MED&resulttype=core&format=json

4 January 2020

Bo Huang

3

1 reference

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4 January 2020

Glenn R Björk

4

1 reference

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4 January 2020

language of work or name

English

0 references

publication date

10 March 2008

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18332122%20AND%20SRC:MED&resulttype=core&format=json

Molecular and Cellular Biology

4 January 2020

published in

1 reference

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4 January 2020

volume

28

1 reference

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4 January 2020

issue

10

1 reference

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4 January 2020

page(s)

3301-3312

1 reference

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describes a project that uses

4 January 2020

ImageQuant

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC2423140/fullTextXML

inferred from PubMed Central ID database lookup

cites work

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9 September 2017

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An early step in wobble uridine tRNA modification requires the Elongator complex

9 September 2017

1 reference

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The Saccharomyces cerevisiae TAN1 gene is required for N4-acetylcytidine formation in tRNA

9 September 2017

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9 September 2017

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Novel methyltransferase for modified uridine residues at the wobble position of tRNA.

9 September 2017

1 reference

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tRNomics: analysis of tRNA genes from 50 genomes of Eukarya, Archaea, and Bacteria reveals anticodon-sparing strategies and domain-specific features

9 September 2017

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Dual function of the tRNA(m(5)U54)methyltransferase in tRNA maturation

9 September 2017

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A primordial tRNA modification required for the evolution of life?

9 September 2017

1 reference

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tRNA gene number and codon usage in the C. elegans genome are co-adapted for optimal translation of highly expressed genes

9 September 2017

1 reference

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The RNA Modification Database: 1999 update

9 September 2017

1 reference

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Designer deletion strains derived from Saccharomyces cerevisiae S288C: a useful set of strains and plasmids for PCR-mediated gene disruption and other applications

9 September 2017

1 reference

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Exonuclease I of Saccharomyces cerevisiae functions in mitotic recombination in vivo and in vitro

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2423140

The products of the SUP45 (eRF1) and SUP35 genes interact to mediate translation termination in Saccharomyces cerevisiae

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2423140

A positive selection for mutants lacking orotidine-5'-phosphate decarboxylase activity in yeast: 5-fluoro-orotic acid resistance

9 September 2017

1 reference

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Codon--anticodon pairing: the wobble hypothesis

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2423140

Molecular mechanism of codon recognition by tRNA species with modified uridine in the first position of the anticodon

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2423140

A Saccharomyces cerevisiae genomic plasmid bank based on a centromere-containing shuttle vector

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2423140

A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2423140

Improved method for high efficiency transformation of intact yeast cells

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2423140

Multifunctional yeast high-copy-number shuttle vectors

9 September 2017

1 reference

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Ty element-induced temperature-sensitive mutations of Saccharomyces cerevisiae

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2423140

Pairing properties of the methylester of 5-carboxymethyl uridine in the wobble position of yeast tRNAArg3

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2423140

"Two out of three": an alternative method for codon reading

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2423140

Universal rules and idiosyncratic features in tRNA identity

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2423140

tRNA genes and retroelements in the yeast genome

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2423140

A La protein requirement for efficient pre-tRNA folding.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2423140

Roles of 5-substituents of tRNA wobble uridines in the recognition of purine-ending codons

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2423140

Yeast tRNALeuUAG. Purification, Properties and Determination of the Nucleotide Sequence by Radioactive Derivative Methods

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2423140

Yeast tRNALeu(Anticodon U-A-G) translates all six leucine codons in extracts from interferon treated cells

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2423140

Wobble position modified nucleosides evolved to select transfer RNA codon recognition: A modified-wobble hypothesis

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2423140

The Kluyveromyces lactis gamma-toxin targets tRNA anticodons.

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2423140

The modified wobble nucleoside uridine-5-oxyacetic acid in tRNAPro(cmo5UGG) promotes reading of all four proline codons in vivo

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2423140

Codon reading and translational error. Reading of the glutamine and lysine codons during protein synthesis in vitro.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2423140

Specificity of yeast glutamic acid transfer RNA for codon recognition.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2423140

Normal yeast tRNA(CAGGln) can suppress amber codons and is encoded by an essential gene.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2423140

Eukaryotic tRNAs(Pro): primary structure of the anticodon loop; presence of 5-carbamoylmethyluridine or inosine as the first nucleoside of the anticodon

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2423140

Direct analysis of aminoacylation levels of tRNAs in vivo. Application to studying recognition of Escherichia coli initiator tRNA mutants by glutaminyl-tRNA synthetase

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2423140

Structural effects of hypermodified nucleosides in the Escherichia coli and human tRNALys anticodon loop: the effect of nucleosides s2U, mcm5U, mcm5s2U, mnm5s2U, t6A, and ms2t6A.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2423140

The role of modifications in codon discrimination by tRNA(Lys)UUU.

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2423140

Accurate translation of the genetic code depends on tRNA modified nucleosides.

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2423140

Transfer RNA gene redundancy and translational selection in Saccharomyces cerevisiae.

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2423140

Recessive lethality of yeast strains carrying the SUP61 suppressor results from loss of a transfer RNA with a unique decoding function

21 August 2018

1 reference

12 December 2020

Presence and coding properties of 2'-O-methyl-5-carbamoylmethyluridine (ncm5Um) in the wobble position of the anticodon of tRNA(Leu) (U*AA) from brewer's yeast

1 reference

12 December 2020

Analysis of action of wobble nucleoside modifications on codon-anticodon pairing within the ribosome

1 reference

12 December 2020

A mutant allele of the SUP45 (SAL4) gene of Saccharomyces cerevisiae shows temperature-dependent allosuppressor and omnipotent suppressor phenotypes

1 reference

12 December 2020

Reduced misreading of asparagine codons by Escherichia coli tRNALys with hypomodified derivatives of 5-methylaminomethyl-2-thiouridine in the wobble position

1 reference

12 December 2020

The modification of the wobble base of tRNAGlu modulates the translation rate of glutamic acid codons in vivo

1 reference

12 December 2020

Restricted wobble rules for eukaryotic genomes

1 reference

12 December 2020

Identifiers

DOI

10.1128/MCB.01542-07

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18332122%20AND%20SRC:MED&resulttype=core&format=json

release_6wfkt4fcnvadrnskolif4kg5eq

4 January 2020

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/6wfkt4fcnvadrnskolif4kg5eq

24 November 2022

mapped directly with Wikidata item

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18332122%20AND%20SRC:MED&resulttype=core&format=json

4 January 2020

PubMed publication ID

18332122

1 reference