(Q39276003)

10 September 2017

title

A framework for inferring biological communities from environmental DNA. (English)

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10 September 2017

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Andrew Olaf Shelton

1

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10 September 2017

James Lawrence O'Donnell

2

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10 September 2017

Jameal F Samhouri

3

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10 September 2017

Natalie Lowell

4

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10 September 2017

Gregory D Williams

5

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10 September 2017

Ryan P Kelly

6

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10 September 2017

language of work or name

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1 September 2016

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10 September 2017

published in

Ecological Applications

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10 September 2017

volume

26

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10 September 2017

issue

6

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10 September 2017

page(s)

1645-1659

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DNA metabarcoding multiplexing and validation of data accuracy for diet assessment: application to omnivorous diet

10 September 2017

cites work

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Environmental conditions influence eDNA persistence in aquatic systems.

21 January 2018

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Barcoded primers used in multiplex amplicon pyrosequencing bias amplification

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Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing

21 January 2018

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The trophic fingerprint of marine fisheries

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DNA extraction method affects microbial community profiles from soils and sediment.

21 January 2018

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Transport distance of invertebrate environmental DNA in a natural river

21 January 2018

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UCHIME improves sensitivity and speed of chimera detection

21 January 2018

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Species Distribution Models: Ecological Explanation and Prediction Across Space and Time

21 January 2018

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Quantification of mesocosm fish and amphibian species diversity via environmental DNA metabarcoding

21 January 2018

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An improved dual-indexing approach for multiplexed 16S rRNA gene sequencing on the Illumina MiSeq platform

21 January 2018

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Assessment of bias associated with incomplete extraction of microbial DNA from soil.

21 January 2018

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Polymerase chain reaction primers miss half of rRNA microbial diversity

21 January 2018

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Identifying ecological and fishing drivers of bycatch in a U.S. groundfish fishery.

21 January 2018

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“Sight-unseen” detection of rare aquatic species using environmental DNA

21 January 2018

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Reliable, verifiable and efficient monitoring of biodiversity via metabarcoding

21 January 2018

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Using environmental DNA to census marine fishes in a large mesocosm

21 January 2018

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Hierarchical modelling and estimation of abundance and population trends in metapopulation designs

21 January 2018

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Quantification of eDNA shedding rates from invasive bighead carp Hypophthalmichthys nobilis and silver carp Hypophthalmichthys molitrix

21 January 2018

1 reference

Groundtruthing next-gen sequencing for microbial ecology-biases and errors in community structure estimates from PCR amplicon pyrosequencing

21 January 2018

1 reference

DNA barcoding and metabarcoding of standardized samples reveal patterns of marine benthic diversity

21 January 2018

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Conservation in a cup of water: estimating biodiversity and population abundance from environmental DNA.

21 January 2018

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Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

21 January 2018

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The release rate of environmental DNA from juvenile and adult fish

21 January 2018

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Persistence of DNA in carcasses, slime and avian feces may affect interpretation of environmental DNA data.

21 January 2018

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Quantifying environmental DNA signals for aquatic invasive species across multiple detection platforms

21 January 2018

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APE: Analyses of Phylogenetics and Evolution in R language

21 January 2018

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Ancient and modern environmental DNA

21 January 2018

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Factors influencing detection of eDNA from a stream-dwelling amphibian.

21 January 2018

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Identifying gastropod spawn from DNA barcodes: possible but not yet practicable

21 January 2018

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ecoPrimers: inference of new DNA barcode markers from whole genome sequence analysis

21 January 2018

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Reducing the effects of PCR amplification and sequencing artifacts on 16S rRNA-based studies

21 January 2018

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Active and passive environmental DNA surveillance of aquatic invasive species

21 January 2018

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Effect of primer mismatch, annealing temperature and PCR cycle number on 16S rRNA gene-targetting bacterial community analysis

21 January 2018

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Selection of primers for optimal taxonomic classification of environmental 16S rRNA gene sequences

21 January 2018

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Estimation of fish biomass using environmental DNA

21 January 2018

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Detection of a diverse marine fish fauna using environmental DNA from seawater samples

21 January 2018

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Monitoring endangered freshwater biodiversity using environmental DNA.

21 January 2018

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Ocean plankton. Eukaryotic plankton diversity in the sunlit ocean

21 January 2018

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Environmental genome shotgun sequencing of the Sargasso Sea

21 January 2018

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Exploiting extension bias in polymerase chain reaction to improve primer specificity in ensembles of nearly identical DNA templates.

21 January 2018

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The future of environmental DNA in ecology

21 January 2018

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Biodiversity soup: metabarcoding of arthropods for rapid biodiversity assessment and biomonitoring

21 January 2018

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21 January 2018

Identifiers

DOI

10.1890/15-1733.1

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10 September 2017

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