(Q39409419)

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ROSMETER: a bioinformatic tool for the identification of transcriptomic imprints related to reactive oxygen species type and origin provides new insights into stress responses.

scientific article published on 6 August 2013

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scholarly article

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23922270%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

ROSMETER: a bioinformatic tool for the identification of transcriptomic imprints related to reactive oxygen species type and origin provides new insights into stress responses (English)

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23922270%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

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1 reference

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inferred from title

reactive oxygen species

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5

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23922270%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

author name string

Shilo Rosenwasser

1

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23922270%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

Robert Fluhr

2

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23922270%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

Janak Raj Joshi

3

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7 March 2020

Noam Leviatan

4

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7 March 2020

Amotz Hetzroni

6

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23922270%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

Haya Friedman

7

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Europe PubMed Central

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7 March 2020

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6 August 2013

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7 March 2020

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13

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Plant Physiology

1 reference

Europe PubMed Central

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7 March 2020

163

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Europe PubMed Central

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7 March 2020

2

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23922270%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

1071-1083

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23922270%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

Mechanisms and dynamics in the thiol/disulfide redox regulatory network: transmitters, sensors and targets

1 reference

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30 August 2018

ROS and redox signalling in the response of plants to abiotic stress

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3793026

30 August 2018

ROS signaling: the new wave?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3793026

30 August 2018

High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.

1 reference

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30 August 2018

Organelles contribute differentially to reactive oxygen species-related events during extended darkness.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3793026

30 August 2018

Transcriptional regulation of ROS controls transition from proliferation to differentiation in the root.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3793026

30 August 2018

Comparative transcriptome analysis of green/white variegated sectors in Arabidopsis yellow variegated2: responses to oxidative and other stresses in white sectors

1 reference

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30 August 2018

Robin: an intuitive wizard application for R-based expression microarray quality assessment and analysis

1 reference

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30 August 2018

A fluorometer-based method for monitoring oxidation of redox-sensitive GFP (roGFP) during development and extended dark stress

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3793026

30 August 2018

ROS in biotic interactions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3793026

30 August 2018

The metabolic response of Arabidopsis roots to oxidative stress is distinct from that of heterotrophic cells in culture and highlights a complex relationship between the levels of transcripts, metabolites, and flux

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3793026

30 August 2018

Reactive oxygen species homeostasis and signalling during drought and salinity stresses

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3793026

30 August 2018

HORMONOMETER: a tool for discerning transcript signatures of hormone action in the Arabidopsis transcriptome.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3793026

30 August 2018

Monitoring the in vivo redox state of plant mitochondria: effect of respiratory inhibitors, abiotic stress and assessment of recovery from oxidative challenge

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3793026

30 August 2018

Complex I dysfunction redirects cellular and mitochondrial metabolism in Arabidopsis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3793026

30 August 2018

Confocal imaging of glutathione redox potential in living plant cells.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3793026

30 August 2018

Early leaf senescence is associated with an altered cellular redox balance in Arabidopsis cpr5/old1 mutants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3793026

30 August 2018

Singlet oxygen is the major reactive oxygen species involved in photooxidative damage to plants.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3793026

30 August 2018

No single way to understand singlet oxygen signalling in plants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3793026

30 August 2018

The absence of ALTERNATIVE OXIDASE1a in Arabidopsis results in acute sensitivity to combined light and drought stress.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3793026

30 August 2018

Enzymatic, but not non-enzymatic, 1O2-mediated peroxidation of polyunsaturated fatty acids forms part of the EXECUTER1-dependent stress response program in the flu mutant of Arabidopsis thaliana

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3793026

30 August 2018

Redox-sensitive GFP in Arabidopsis thaliana is a quantitative biosensor for the redox potential of the cellular glutathione redox buffer.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3793026

30 August 2018

Biological hydroperoxides and singlet molecular oxygen generation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3793026

30 August 2018

The AtGenExpress global stress expression data set: protocols, evaluation and model data analysis of UV-B light, drought and cold stress responses.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3793026

30 August 2018

Diverse subcellular locations of cryptogein-induced reactive oxygen species production in tobacco Bright Yellow-2 cells.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3793026

30 August 2018

Suppression of Arabidopsis vesicle-SNARE expression inhibited fusion of H2O2-containing vesicles with tonoplast and increased salt tolerance

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3793026

30 August 2018

Plant peroxisomes as a source of signalling molecules

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3793026

30 August 2018

Production and scavenging of reactive oxygen species in chloroplasts and their functions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3793026

30 August 2018

Production of reactive oxygen species by plant NADPH oxidases.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3793026

30 August 2018

Transcriptomic footprints disclose specificity of reactive oxygen species signaling in Arabidopsis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3793026

30 August 2018

Transcription analysis of arabidopsis membrane transporters and hormone pathways during developmental and induced leaf senescence.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3793026

30 August 2018

Characterization of transformed Arabidopsis with altered alternative oxidase levels and analysis of effects on reactive oxygen species in tissue.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3793026

30 August 2018

Genome-wide analysis of hydrogen peroxide-regulated gene expression in Arabidopsis reveals a high light-induced transcriptional cluster involved in anthocyanin biosynthesis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3793026

30 August 2018

Hydrogen peroxide-induced cell death in Arabidopsis: transcriptional and mutant analysis reveals a role of an oxoglutarate-dependent dioxygenase gene in the cell death process

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3793026

30 August 2018

Stress-induced co-expression of alternative respiratory chain components in Arabidopsis thaliana.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3793026

30 August 2018

Redox homeostasis and antioxidant signaling: a metabolic interface between stress perception and physiological responses

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3793026

30 August 2018

Cytosolic ascorbate peroxidase 1 is a central component of the reactive oxygen gene network of Arabidopsis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3793026

30 August 2018

Targets of the WRKY53 transcription factor and its role during leaf senescence in Arabidopsis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3793026

30 August 2018

The genetic basis of singlet oxygen-induced stress responses of Arabidopsis thaliana

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3793026

30 August 2018

An extensive microarray analysis of AAL-toxin-induced cell death in Arabidopsis thaliana brings new insights into the complexity of programmed cell death in plants.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3793026

30 August 2018

Control of ascorbate synthesis by respiration and its implications for stress responses

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3793026

30 August 2018

Rapid induction of distinct stress responses after the release of singlet oxygen in Arabidopsis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3793026

30 August 2018

Mitochondrial complex I inhibitor rotenone induces apoptosis through enhancing mitochondrial reactive oxygen species production

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3793026

30 August 2018

Dissecting glucose signalling with diversity-oriented synthesis and small-molecule microarrays.

1 reference

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30 August 2018

Superoxide production by plant homologues of the gp91(phox) NADPH oxidase. Modulation of activity by calcium and by tobacco mosaic virus infection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3793026

30 August 2018

PLANT MITOCHONDRIA AND OXIDATIVE STRESS: Electron Transport, NADPH Turnover, and Metabolism of Reactive Oxygen Species

1 reference

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30 August 2018

Peroxisomes as a source of reactive oxygen species and nitric oxide signal molecules in plant cells.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3793026

30 August 2018

Role of reactive oxygen intermediates and cognate redox signaling in disease resistance

1 reference

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30 August 2018

The impact of impaired mitochondrial function on retrograde signalling: a meta-analysis of transcriptomic responses

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3793026

2 December 2018

The zinc-finger protein Zat12 plays a central role in reactive oxygen and abiotic stress signaling in Arabidopsis

1 reference

https://pubmed.ncbi.nlm.nih.gov/23922270

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The activated oxygen role of peroxisomes in senescence

1 reference

https://pubmed.ncbi.nlm.nih.gov/23922270

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Singlet oxygen generation from the reaction of ozone with plant leaves

1 reference

https://pubmed.ncbi.nlm.nih.gov/23922270

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

AtCAST, a tool for exploring gene expression similarities among DNA microarray experiments using networks

1 reference

https://pubmed.ncbi.nlm.nih.gov/23922270

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

ROS signalling--specificity is required

1 reference

https://pubmed.ncbi.nlm.nih.gov/23922270

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Specific aquaporins facilitate the diffusion of hydrogen peroxide across membranes

1 reference

https://pubmed.ncbi.nlm.nih.gov/23922270

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The water-water cycle is essential for chloroplast protection in the absence of stress

1 reference

https://pubmed.ncbi.nlm.nih.gov/23922270

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Chemical quenching of singlet oxygen by carotenoids in plants

1 reference

https://pubmed.ncbi.nlm.nih.gov/23922270

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mitochondrial reactive oxygen species. Contribution to oxidative stress and interorganellar signaling

1 reference

https://pubmed.ncbi.nlm.nih.gov/23922270

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

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