(Q39492828)

English

Cloning, nucleotide sequencing, and functional analysis of a novel, mobile cluster of biodegradation genes from Pseudomonas aeruginosa strain JB2.

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scholarly article

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Europe PubMed Central

PMC publication ID

12 September 2017

Cloning, nucleotide sequencing, and functional analysis of a novel, mobile cluster of biodegradation genes from Pseudomonas aeruginosa strain JB2. (English)

1 reference

Europe PubMed Central

PMC publication ID

12 September 2017

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Pseudomonas aeruginosa

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author name string

W J Hickey

1

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Europe PubMed Central

PMC publication ID

12 September 2017

G Sabat

2

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Europe PubMed Central

PMC publication ID

12 September 2017

A S Yuroff

3

1 reference

Europe PubMed Central

PMC publication ID

12 September 2017

A R Arment

4

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Europe PubMed Central

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12 September 2017

J Pérez-Lesher

5

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Europe PubMed Central

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12 September 2017

language of work or name

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publication date

1 October 2001

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Europe PubMed Central

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12 September 2017

Applied and Environmental Microbiology

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Europe PubMed Central

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12 September 2017

67

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Europe PubMed Central

PMC publication ID

12 September 2017

10

1 reference

Europe PubMed Central

PMC publication ID

12 September 2017

4603-4609

1 reference

Europe PubMed Central

PMC publication ID

12 September 2017

Mobile catabolic genes in bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=93209

12 September 2017

SALICYLATE HYDROXYLASE, A MONOOXYGENASE REQUIRING FLAVIN ADENINE DINUCLEOTIDE. I. PURIFICATION AND GENERAL PROPERTIES

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=93209

12 September 2017

nag genes of Ralstonia (formerly Pseudomonas) sp. strain U2 encoding enzymes for gentisate catabolism

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=93209

12 September 2017

Occurrence of Tn4371-related mobile elements and sequences in (chloro)biphenyl-degrading bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=93209

12 September 2017

Effect of dissemination of 2,4-dichlorophenoxyacetic acid (2,4-D) degradation plasmids on 2,4-D degradation and on bacterial community structure in two different soil horizons

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=93209

12 September 2017

A 90-kilobase conjugative chromosomal element coding for biphenyl and salicylate catabolism in Pseudomonas putida KF715

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=93209

12 September 2017

Substrate specificity of naphthalene dioxygenase: effect of specific amino acids at the active site of the enzyme

1 reference

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12 September 2017

Genetic exchange between bacteria in the environment

1 reference

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12 September 2017

Construction and characterization of two recombinant bacteria that grow on ortho- and para-substituted chlorobiphenyls

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=93209

12 September 2017

A hidden Markov model for predicting transmembrane helices in protein sequences

1 reference

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12 September 2017

ATP-binding-cassette (ABC) transport systems: functional and structural aspects of the ATP-hydrolyzing subunits/domains

1 reference

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12 September 2017

Structure of an aromatic-ring-hydroxylating dioxygenase-naphthalene 1,2-dioxygenase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=93209

12 September 2017

A gene cluster encoding steps in conversion of naphthalene to gentisate in Pseudomonas sp. strain U2.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=93209

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Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

1 reference

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12 September 2017

Cloning of genes involved in carbazole degradation of Pseudomonas sp. strain CA10: nucleotide sequences of genes and characterization of meta-cleavage enzymes and hydrolase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=93209

12 September 2017

A cluster of bacterial genes for anaerobic benzene ring biodegradation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=93209

12 September 2017

Analysis of a new dimeric extradiol dioxygenase from a naphthalenesulfonate-degrading sphingomonad

1 reference

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Molecular basis of symbiosis between Rhizobium and legumes

1 reference

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A set of ordered cosmids and a detailed genetic and physical map for the 8 Mb Streptomyces coelicolor A3(2) chromosome

1 reference

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12 September 2017

Nucleotide sequence and initial functional characterization of the clcR gene encoding a LysR family activator of the clcABD chlorocatechol operon in Pseudomonas putida

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=93209

12 September 2017

Molecular biology of the LysR family of transcriptional regulators

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=93209

12 September 2017

Protein family classification based on searching a database of blocks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=93209

12 September 2017

Integration and excision of a 2,4-dichlorophenoxyacetic acid-degradative plasmid in Alcaligenes paradoxus and evidence of its natural intergeneric transfer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=93209

12 September 2017

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=93209

12 September 2017

Molecular characterization of Yersinia enterocolitica by pulsed-field gel electrophoresis and hybridization of DNA fragments to ail and pYV probes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=93209

12 September 2017

Distantly related sequences in the alpha- and beta-subunits of ATP synthase, myosin, kinases and other ATP-requiring enzymes and a common nucleotide binding fold

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=93209

12 September 2017

A proposal for a uniform nomenclature in bacterial genetics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=93209

12 September 2017

Organization and nucleotide sequence determination of a gene cluster involved in 3-chlorocatechol degradation

1 reference

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12 September 2017

An efficient mobilizable cosmid vector, pRK7813, and its use in a rapid method for marker exchange in Pseudomonas fluorescens strain HV37a

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=93209

12 September 2017

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12 September 2017

The P-loop--a common motif in ATP- and GTP-binding proteins

1 reference

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12 September 2017

Nucleotide sequences of the Acinetobacter calcoaceticus benABC genes for benzoate 1,2-dioxygenase reveal evolutionary relationships among multicomponent oxygenases

1 reference

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12 September 2017

The electron-transport proteins of hydroxylating bacterial dioxygenases

1 reference

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12 September 2017

ABC Transporters: From Microorganisms to Man

1 reference

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12 September 2017

Int-B13, an unusual site-specific recombinase of the bacteriophage P4 integrase family, is responsible for chromosomal insertion of the 105-kilobase clc element of Pseudomonas sp. Strain B13.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=93209

14 September 2017

Chromosomal integration, tandem amplification, and deamplification in Pseudomonas putida F1 of a 105-kilobase genetic element containing the chlorocatechol degradative genes from Pseudomonas sp. Strain B13.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=93209

14 September 2017

Cloning, characterization, and sequence analysis of the clcE gene encoding the maleylacetate reductase of Pseudomonas sp. strain B13.

1 reference

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2,4-Dinitrotoluene dioxygenase from Burkholderia sp. strain DNT: similarity to naphthalene dioxygenase

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Identification of a catabolic transposon, Tn4371, carrying biphenyl and 4-chlorobiphenyl degradation genes in Alcaligenes eutrophus A5.

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=93209

14 September 2017

Chromosomal gene capture mediated by the Pseudomonas putida TOL catabolic plasmid

1 reference

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14 September 2017

Nucleotide sequence of the metapyrocatechase II (catechol 2,3-oxygenase II) gene mpcII from Alcaligenes eutrophus JMP 222.

1 reference

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Oxygen activating nonheme iron enzymes.

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17 June 2018

The 2-His-1-carboxylate facial triad--an emerging structural motif in mononuclear non-heme iron(II) enzymes

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A general method for detecting and sizing large plasmids.

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Catabolic instability, plasmid gene deletion and recombination in Alcaligenes sp. BR60.

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Degradation of mono-, di-, and trihalogenated benzoic acids by Pseudomonas aeruginosa JB2.

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Mineralization of 2-chloro- and 2,5-dichlorobiphenyl by Pseudomonas sp. strain UCR2

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https://pubmed.ncbi.nlm.nih.gov/11571162

12 December 2020

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inferred from PubMed ID database lookup

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https://pubmed.ncbi.nlm.nih.gov/11571162

12 December 2020

based on heuristic

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Mechanism of the salicylate 1-monooxygenase reaction. VI. The monomeric nature of the enzyme

1 reference

https://pubmed.ncbi.nlm.nih.gov/11571162

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Identifiers

10.1128/AEM.67.10.4603-4609.2001

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Europe PubMed Central

PMC publication ID

12 September 2017

release_v3sc4kzpfza55htleeshtgp74q

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https://api.fatcat.wiki/v0/release/v3sc4kzpfza55htleeshtgp74q

24 November 2022

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mapped directly with Wikidata item

PMC publication ID

1 reference

Europe PubMed Central

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12 September 2017

PubMed publication ID

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Europe PubMed Central

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12 September 2017

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