(Q39600824)

13 September 2017

CopR binds and bends its target DNA: a footprinting and fluorescence resonance energy transfer study (English)

1 reference

13 September 2017

Katrin Steinmetzer

1

1 reference

13 September 2017

Joachim Behlke

series ordinal

2

1 reference

13 September 2017

Sabine Brantl

series ordinal

3

1 reference

13 September 2017

Mike Lorenz

series ordinal

4

1 reference

13 September 2017

language of work or name

English

0 references

publication date

1 May 2002

1 reference

13 September 2017

Nucleic Acids Research

1 reference

13 September 2017

30

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13 September 2017

9

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13 September 2017

2052-2060

1 reference

Global structure similarities of intact and nicked DNA complexed with IHF measured in solution by fluorescence resonance energy transfer

13 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=113856

Modeling helix-turn-helix protein-induced DNA bending with knowledge-based distance restraints

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=113856

DNA bending: the prevalence of kinkiness and the virtues of normality

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=113856

The phage 434 OR2/R1-69 complex at 2.5 A resolution

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=113856

DNA twisting and the affinity of bacteriophage 434 operator for bacteriophage 434 repressor

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=113856

Recognition of a DNA operator by the repressor of phage 434: a view at high resolution

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=113856

Hydroxyl radical "footprinting": high-resolution information about DNA-protein contacts and application to lambda repressor and Cro protein

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=113856

Fluorescence resonance energy transfer and nucleic acids

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=113856

Dual function of the copR gene product of plasmid pIP501.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=113856

Hydroxyl radical footprints reveal novel structural features around the NF I binding site in adenovirus DNA.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=113856

Improved detection of helix-turn-helix DNA-binding motifs in protein sequences

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=113856

Copy number control of the streptococcal plasmio plP501 occurs at three levels

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=113856

Plasmid pIP501 encoded transcriptional repressor CopR binds asymmetrically at two consecutive major grooves of the DNA.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=113856

Molecular mass determination by sedimentation velocity experiments and direct fitting of the concentration profiles

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=113856

Gene organization of the Streptococcus pyogenes plasmid pDB101: sequence analysis of the orf eta-copS region.

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=113856

Purification and in vitro DNA-binding specificity of the Bacillus subtilis phage phi 105 repressor

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=113856

Physical characterisation of the replication region of the Streptococcus faecalis plasmid pAM beta 1.

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=113856

HYDRO: a computer program for the prediction of hydrodynamic properties of macromolecules

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=113856

The copR gene product of plasmid pIP501 acts as a transcriptional repressor at the essential repR promoter.

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=113856

DNA bending induced by high mobility group proteins studied by fluorescence resonance energy transfer

21 August 2018

1 reference

12 December 2020

Sequence-specific DNA binding of the phage Mu C protein: footprinting analysis reveals altered DNA conformation upon protein binding

1 reference

12 December 2020

Global structure of three-way DNA junctions with and without additional unpaired bases: a fluorescence resonance energy transfer analysis

1 reference

12 December 2020

DNA curvature in solution measured by fluorescence resonance energy transfer

1 reference

12 December 2020

Sequence-dependent DNA structure: dinucleotide conformational maps

1 reference

12 December 2020

Transcriptional repressor CopR: structure model-based localization of the deoxyribonucleic acid binding motif

1 reference

12 December 2020

Transcriptional repressor CopR: amino acids involved in forming the dimeric interface

1 reference

12 December 2020

Location of cyanine-3 on double-stranded DNA: importance for fluorescence resonance energy transfer studies

1 reference

12 December 2020

Transcriptional repressor CopR: the structured acidic C terminus is important for protein stability

1 reference

12 December 2020

Plasmid pIP501 encoded transcriptional repressor CopR binds to its target DNA as a dimer

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/30.9.2052

1 reference

13 September 2017

1 reference

13 September 2017

PubMed publication ID

11972345

1 reference