(Q39692004)

14 September 2017

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title

Sequence-specific assignments and their use in NMR studies of DNA structure (English)

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14 September 2017

Reid BR

1

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14 September 2017

language of work or name

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1 August 1987

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Quarterly Reviews of Biophysics

14 September 2017

published in

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14 September 2017

volume

20

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14 September 2017

issue

1-2

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14 September 2017

page(s)

1-34

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A hypothesis on a specific sequence-dependent conformation of DNA and its relation to the binding of the lac-repressor protein

14 September 2017

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1H NMR sudy of the interaction of bacteriophageλ Cro protein with the OR3 operator. Evidence for a change of the conformation of the OR3 operator on binding

21 January 2018

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A protein structure from nuclear magnetic resonance data. lac repressor headpiece

21 January 2018

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An evaluation of the combined use of nuclear magnetic resonance and distance geometry for the determination of protein conformations in solution

21 January 2018

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The combinatorial distance geometry method for the calculation of molecular conformation. II. Sample problems and computational statistics.

21 January 2018

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Complete assignment of the imino protons of Escherichia coli valine transfer RNA: two-dimensional NMR studies in water

21 January 2018

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Three-dimensional structure of a DNA hairpin in solution: two-dimensional NMR studies and distance geometry calculations on d(CGCGTTTTCGCG).

21 January 2018

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On loop folding in nucleic acid hairpin-type structures

21 January 2018

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Effective water resonance suppression in 1D- and 2D-FT-1H-NMR spectroscopy of biopolymers in aqueous solution

21 January 2018

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Structure, kinetics and thermodynamics of DNA hairpin fragments in solution

21 January 2018

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An investigation into the solution structures of two self-complementary DNA oligomers, 5'-d(C-G-T-A-C-G) and 5'-d(A-C-G-C-G-C-G-T), by means of nuclear-Overhauser-enhancement measurements

21 January 2018

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Structure of the anthramycin-d(ATGCAT)2 adduct from one- and two-dimensional proton NMR experiments in solution

21 January 2018

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Solution conformation of proteinase inhibitor IIA from bull seminal plasma by 1H nuclear magnetic resonance and distance geometry

21 January 2018

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31P and two-dimensional 31P/1H correlated NMR spectra of Duplex d(Ap[17O]Gp[18O]Cp[16O]T) and assignment of 31P signals in d(ApGpCpT)2-actinomycin D complex

21 January 2018

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Duplex-hairpin transitions in DNA: NMR studies on CGCGTATACGCG.

21 January 2018

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1H-NMR study of the λ operator siteOL1: assignment of the imino and adenine H2 resonances

21 January 2018

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Two-dimensional 1H NMR study of the lambda operator site OL1: a sequential assignment strategy and its application

21 January 2018

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Imino proton assignments in the proton nuclear magnetic resonance spectrum of the .lambda. phage OR3 deoxyribonucleic acid fragment

21 January 2018

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Open states in native polynucleotides. II. Hydrogen-exchange study of cytosine-containing double helices

21 January 2018

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The structure of a pseudo intercalated complex between actinomycin and the DNA binding sequence d(GpC).

21 January 2018

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Two-dimensional proton nuclear magnetic resonance investigation of the synthetic deoxyribonucleic acid decamer d(ATATCGATAT)2.

21 January 2018

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Nuclear Overhauser data and stereochemical considerations suggest that netropsin binds symmetrically within the minor groove of poly(dA).poly(dT), forming hydrogen bonds with both strands of the double helix

21 January 2018

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Stereochemistry of actinomycin binding to DNA. II. Detailed molecular model of actinomycin-DNA complex and its implications.

21 January 2018

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lac Repressor headpiece binds specifically to half of the lac operator: a proton nuclear magnetic resonance study

21 January 2018

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Refinement of the solution structure of the B DNA hexamer 5'd(C-G-T-A-C-G)2 on the basis of inter-proton distance data

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500004212

Structure of poly(dA).poly(dT) is not identical to the AT rich regions of the single crystal structure of CGCGAATTBrCGCG. The consequence of this to netropsin binding to poly(dA).poly(dT).

21 January 2018

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Nuclear Overhauser effect study and assignment of D stem and reverse-Hoogsteen base pair proton resonances in yeast tRNAAsp

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500004212

Interproton distance measurements in solution for a double-stranded DNA undecamer comprising a portion of the specific target site for the cycliC AMP receptor protein in the gal operon. A nuclear Overhauser enhancement study

21 January 2018

1 reference

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Proton nuclear overhauser effect study of the structure of an actinomycin D complex with a self-complementary tetranucleoside triphosphate

21 January 2018

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Mutual interaction between adjacent dG . dC actinomycin binding sites and dA . dT netropsin binding sites on the self-complementary d(C-G-C-G-A-A-T-T-C-G-C-G) duplex in solution

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500004212

Sequence dependence of hydrogen exchange kinetics in DNA duplexes at the individual base pair level in solution

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500004212

Antibiotic-DNA interactions: intermolecular nuclear Overhauser effects in the netropsin-d(C-G-C-G-A-A-T-T-C-G-C-G) complex in solution

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500004212

21 January 2018

Protein-DNA recognition

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500004212

Structural Studies of Protein-Nucleic Acid Interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500004212

Structure refinement of oligonucleotides by molecular dynamics with nuclear Overhauser effect interproton distance restraints: application to 5' d(C-G-T-A-C-G)2.

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500004212

Two-dimensional 1H-nmr studies on the lac repressor DNA binding domain: further resonance assignments and identification of nuclear Overhauser enhancements.

21 January 2018

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Two‐dimensional spectroscopy. Application to nuclear magnetic resonance

21 January 2018

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21 January 2018

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Studies of the binding of actinomycin and related compounds to DNA.

21 January 2018

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A proton magnetic resonance study of the aggregation of actinomycin D in D 2 O.

21 January 2018

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Structure of the DNA-binding region of lac repressor inferred from its homology with cro repressor

21 January 2018

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Possible molecular detent in the DNA structure at regulatory sequences

21 January 2018

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https://api.crossref.org/works/10.1017%2FS0033583500004212

Proton exchange and base-pair kinetics of poly(rA).poly(rU) and poly(rI).poly(rC).

21 January 2018

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Nuclear magnetic resonance study of the proton exchange rate in the operator-promoter DNA sequence of the trp operon of Escherichia coli.

21 January 2018

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Binding of an antitumor drug to DNA, Netropsin and C-G-C-G-A-A-T-T-BrC-G-C-G

21 January 2018

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Investigation of the solution structures of short nucleic acid fragments by means of nuclear overhauser enhancement measurements

21 January 2018

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https://api.crossref.org/works/10.1017%2FS0033583500004212

Internal mobility in a double-stranded B DNA hexamer and undecamer

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500004212

A nuclear-Overhauser-enhancement study of the solution structure of a double-stranded DNA undecamer comprising a portion of the specific target site for the cyclic-AMP-receptor protein in the gal operon. Sequential resonance assignment

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500004212

Sequential resonance assignments as a basis for determination of spatial protein structures by high resolution proton nuclear magnetic resonance

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500004212

DNA conformation is determined by economics in the hydration of phosphate groups

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500004212

Crystalline A-dna: the X-ray analysis of the fragment d(G-G-T-A-T-A-C-C)

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500004212

7 January 2021

Proton nuclear Overhauser effect study of the structure of a deoxyoligonucleotide duplex in aqueous solution

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500004212

7 January 2021

Nuclear Overhauser assignment of the imino protons of the acceptor helix and the ribothymidine helix in the nuclear magnetic resonance spectrum of Escherichia coli isoleucine transfer ribonucleic acid: evidence for costacked helices in solution

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500004212

7 January 2021

Solution structure of [d(A-T)5]2 via complete relaxation matrix analysis of two-dimensional nuclear Overhauser effect spectra and molecular mechanics calculations: evidence for a hydration tunnel

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500004212

7 January 2021

1H nuclear magnetic resonance assignments for d-(GCATTAATGC)2 using experimental refinements of established procedures

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500004212

7 January 2021

Role of actinomycin pentapeptides in actinomycin-deoxyribonucleic acid binding and kinetics

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500004212

7 January 2021

The solution structure of a B-DNA undecamer comprising a portion of the specific target site for the cAMP receptor protein in the gal operon. Refinement on the basis of interproton distance data

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500004212

7 January 2021

Sequential resonance assignments in 1H NMR spectra of oligonucleotides by two-dimensional NMR spectroscopy

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500004212

7 January 2021

Sequence-specific recognition of deoxyribonucleic acid. Chemical synthesis and nuclear magnetic resonance assignment of the imino protons of lambda OR3 operator deoxyribonucleic acid

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500004212

7 January 2021

Sequence-dependent structural variations in two right-handed alternating pyrimidine-purine DNA oligomers in solution determined by nuclear Overhauser enhancement measurements

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500004212

7 January 2021

NMR studies of DNA recognition sequences and their interaction with proteins. The phage lambda OR1 operator, a symmetric lac operator and their specific complexes with cro protein and lac repressor "headpiece"

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500004212

7 January 2021

Sequence-specific recognition of DNA: NMR studies of the imino protons of a synthetic RNA polymerase promoter

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500004212

7 January 2021

1H NMR studies on the interaction between distamycin A and a symmetrical DNA dodecamer

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500004212

7 January 2021

Netropsin specifically recognizes one of the two conformationally equivalent strands of poly(dA).poly(dT). One dimensional NMR study at 500 MHz involving NOE transfer between netropsin and DNA protons

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https://api.crossref.org/works/10.1017%2FS0033583500004212

7 January 2021

NMR Study of the Interaction between the lac Repressor and the lac Operator

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https://api.crossref.org/works/10.1017%2FS0033583500004212

7 January 2021

Optimised parameters for A-DNA and B-DNA

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500004212

7 January 2021

Two-dimensional nuclear Overhauser enhancement investigation of the solution structure and dynamics of the DNA octamer [d(GGTATACC)]2

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500004212

7 January 2021

Investigation of the solution structure of a DNA octamer [d(GGAATTCC)]2 using two-dimensional nuclear Overhauser enhancement spectroscopy

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500004212

7 January 2021

Hydrogen exchange and structural dynamics of proteins and nucleic acids

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500004212

7 January 2021

Assignment of the non-exchangeable proton resonances of d(C-G-C-G-A-A-T-T-C-G-C-G) using two-dimensional nuclear magnetic resonance methods

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500004212

7 January 2021

Aqueous solution structure of an intercalated actinomycin D-dATGCAT complex by two-dimensional and one-dimensional proton NMR

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500004212

7 January 2021

Sequence-specific assignment of the backbone 1H-and 31P-NMR lines in a short DNA duplex with homo- and heteronuclear correlated spectroscopy

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500004212

7 January 2021

Structure of a B-DNA dodecamer. II. Influence of base sequence on helix structure

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500004212

7 January 2021

Sequence-specific resonance assignments in the 1H nuclear-magnetic-resonance spectrum of the lac repressor DNA-binding domain 1-51 from Escherichia coli by two-dimensional spectroscopy

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500004212

7 January 2021

Base sequence and helix structure variation in B and A DNA

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500004212

7 January 2021

Conformational analysis of a hybrid DNA-RNA double helical oligonucleotide in aqueous solution: d(CG)r(CG)d(CG) studied by 1D- and 2D-1H NMR spectroscopy

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500004212

7 January 2021

Internal motions of transfer RNA: a study of exchanging protons by magnetic resonance

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500004212

7 January 2021

10.1017/S0033583500004212

Identifiers

DOI

1 reference

14 September 2017

1 reference