(Q39718355)

14 September 2017

Logitlinear models for the prediction of splice sites in plant pre-mRNA sequences (English)

1 reference

14 September 2017

J Kleffe

1

1 reference

14 September 2017

K Hermann

2

1 reference

14 September 2017

W Vahrson

3

1 reference

14 September 2017

B Wittig

4

1 reference

14 September 2017

V Brendel

5

1 reference

14 September 2017

language of work or name

English

0 references

publication date

1 December 1996

1 reference

14 September 2017

Nucleic Acids Research

1 reference

14 September 2017

24

1 reference

14 September 2017

23

1 reference

14 September 2017

4709-4718

1 reference

Mutation of putative branchpoint consensus sequences in plant introns reduces splicing efficiency

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146321

Splice site prediction in Arabidopsis thaliana pre-mRNA by combining local and global sequence information

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146321

Cleaning the GenBank Arabidopsis thaliana data set.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146321

MATRIX SEARCH 1.0: a computer program that scans DNA sequences for transcriptional elements using a database of weight matrices.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146321

Factors affecting authentic 5' splice site selection in plant nuclei

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146321

3' splice site selection in dicot plant nuclei is position dependent

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146321

Exon recognition in vertebrate splicing

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146321

Intron splicing and intron-mediated enhanced expression in monocots

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146321

Information contents and dinucleotide compositions of plant intron sequences vary with evolutionary origin.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146321

Identification of coding regions in genomic DNA sequences: an application of dynamic programming and neural networks

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146321

Nuclear pre-mRNA processing in higher plants

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146321

Prediction of function in DNA sequence analysis

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146321

DNASTAT: a Pascal unit for the statistical analysis of DNA and protein sequences

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146321

A new algorithm for predicting splice site sequence based on an improvement of categorical discriminant analysis.

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146321

Intron creation and polyadenylation in maize are directed by AU-rich RNA.

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146321

Predicting Pol II promoter sequences using transcription factor binding sites

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146321

Prediction of human mRNA donor and acceptor sites from the DNA sequence

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146321

Prediction of gene structure

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146321

Evaluation of gene structure prediction programs.

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146321

Eukaryotic promoter recognition by binding sites for transcription factors.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146321

Gene structure prediction by linguistic methods.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146321

The AU-rich sequences present in the introns of plant nuclear pre-mRNAs are required for splicing.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146321

Mapping of branchpoint nucleotides in mutant pre-mRNAs expressed in plant cells

20 August 2018

1 reference

12 December 2020

gm: a practical tool for automating DNA sequence analysis

1 reference

12 December 2020

A repeating 11-mer amino acid motif and plant desiccation

1 reference

12 December 2020

Addition of A- and U-rich sequence increases the splicing efficiency of a deleted form of a maize intron

1 reference

12 December 2020

Expression of maize Adh1 intron mutants in tobacco nuclei

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/24.23.4709

1 reference

release_tiuptweqebhk3d2hss7pjobhvq

14 September 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/tiuptweqebhk3d2hss7pjobhvq

24 November 2022

mapped directly with Wikidata item

1 reference

14 September 2017

PubMed publication ID

8972857

1 reference