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English
In vitro and in vivo self-cleavage of a viroid RNA with a mutation in the hammerhead catalytic pocket.
scientific article published on April 1998
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scholarly article
1 reference
stated in
Europe PubMed Central
PMC publication ID
147498
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9518479%20AND%20SRC:MED&resulttype=core&format=json
retrieved
10 November 2019
title
In vitro and in vivo self-cleavage of a viroid RNA with a mutation in the hammerhead catalytic pocket
(English)
1 reference
stated in
Europe PubMed Central
PMC publication ID
147498
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9518479%20AND%20SRC:MED&resulttype=core&format=json
retrieved
10 November 2019
main subject
ribozyme
0 references
author
Ricardo Flores
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMC publication ID
147498
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9518479%20AND%20SRC:MED&resulttype=core&format=json
retrieved
10 November 2019
author name string
S Ambrós
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMC publication ID
147498
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9518479%20AND%20SRC:MED&resulttype=core&format=json
retrieved
10 November 2019
language of work or name
English
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publication date
1 April 1998
1 reference
stated in
Europe PubMed Central
PMC publication ID
147498
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9518479%20AND%20SRC:MED&resulttype=core&format=json
retrieved
10 November 2019
published in
Nucleic Acids Research
1 reference
stated in
Europe PubMed Central
PMC publication ID
147498
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9518479%20AND%20SRC:MED&resulttype=core&format=json
retrieved
10 November 2019
volume
26
1 reference
stated in
Europe PubMed Central
PMC publication ID
147498
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9518479%20AND%20SRC:MED&resulttype=core&format=json
retrieved
10 November 2019
issue
8
1 reference
stated in
Europe PubMed Central
PMC publication ID
147498
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9518479%20AND%20SRC:MED&resulttype=core&format=json
retrieved
10 November 2019
page(s)
1877-1883
1 reference
stated in
Europe PubMed Central
PMC publication ID
147498
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9518479%20AND%20SRC:MED&resulttype=core&format=json
retrieved
10 November 2019
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Autolytic processing of dimeric plant virus satellite RNA
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Mutational analysis of potato spindle tuber viroid reveals complex relationships between structure and infectivity
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14 September 2017
Chrysanthemum chlorotic mottle viroid: unusual structural properties of a subgroup of self-cleaving viroids with hammerhead ribozymes.
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Capturing the structure of a catalytic RNA intermediate: the hammerhead ribozyme
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Rescue of abasic hammerhead ribozymes by exogenous addition of specific bases
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A long-range pseudoknot is required for activity of the Neurospora VS ribozyme
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Three-dimensional structure of a hammerhead ribozyme
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14 September 2017
Replication of avocado sunblotch viroid: evidence for a symmetric pathway with two rolling circles and hammerhead ribozyme processing.
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Identification of a retroviroid-like element from plants
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14 September 2017
The crystal structure of an all-RNA hammerhead ribozyme: a proposed mechanism for RNA catalytic cleavage
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147498
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14 September 2017
Kinetic characterization of intramolecular and intermolecular hammerhead RNAs with stem II deletions
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14 September 2017
The roles of the conserved pyrimidine bases in hammerhead ribozyme catalysis: evidence for a magnesium ion-binding site
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Rapid evolution of RNA genomes
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Structure of yeast phenylalanine tRNA at 3 Å resolution
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14 September 2017
Self-cleavage of plus and minus RNA transcripts of avocado sunblotch viroid
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14 September 2017
Self-cleavage of virusoid RNA is performed by the proposed 55-nucleotide active site
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PubMed Central
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Self-cleavage of plus and minus RNAs of a virusoid and a structural model for the active sites
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Self-cleaving transcripts of satellite DNA from the newt
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14 September 2017
Numbering system for the hammerhead
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147498
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14 September 2017
Plus and minus RNAs of peach latent mosaic viroid self-cleave in vitro via hammerhead structures
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PubMed Central
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DNA sequencing with chain-terminating inhibitors
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14 September 2017
A 451-nucleotide circular RNA from cherry with hammerhead ribozymes in its strands of both polarities.
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PubMed Central
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14 September 2017
The RNA of both polarities of the peach latent mosaic viroid self-cleaves in vitro solely by single hammerhead structures
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147498
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14 September 2017
The quasispecies (extremely heterogeneous) nature of viral RNA genome populations: biological relevance--a review
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14 September 2017
Eleven new sequence variants of citrus exocortis viroid and the correlation of sequence with pathogenicity
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14 September 2017
Multiple pathways of reversion in viroids for conservation of structural elements
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25 September 2017
Structure and function of the hammerhead ribozyme: an unfinished story
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25 September 2017
Examination of the catalytic fitness of the hammerhead ribozyme by in vitro selection.
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PubMed Central
reference URL
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15 June 2018
A highly efficient procedure for site-specific mutagenesis of full-length plasmids using Vent DNA polymerase.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147498
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15 June 2018
Variation of viroid profiles in individual grapevine plants: novel grapevine yellow speckle viroid 1 mutants show alterations of hairpin I.
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147498
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15 June 2018
Characterization of multiple circular RNAs derived from a plant viroid-like RNA by sequence deletions and duplications.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147498
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15 June 2018
Compilation of self-cleaving sequences from plant virus satellite RNAs and other sources
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147498
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15 June 2018
A satellite RNA of barley yellow dwarf virus contains a novel hammerhead structure in the self-cleavage domain
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147498
retrieved
15 June 2018
Sequence requirements of the hammerhead RNA self-cleavage reaction
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147498
retrieved
15 June 2018
Sequence analysis of five new field isolates demonstrates that the chain length of potato spindle tuber viroid (PSTVd) is not strictly conserved but as variable as in other viroids.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147498
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15 June 2018
The genetic stability of potato spindle tuber viroid (PSTVd) molecular variants
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147498
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20 August 2018
Simple RNA enzymes with new and highly specific endoribonuclease activities
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147498
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20 August 2018
Isolation of active ribozymes from an RNA pool of random sequences using an anchored substrate RNA
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/9518479
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Self-cleaving viroid and newt RNAs may only be active as dimers
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/9518479
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
A small catalytic oligoribonucleotide
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/9518479
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1093/NAR/26.8.1877
1 reference
stated in
Europe PubMed Central
PMC publication ID
147498
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9518479%20AND%20SRC:MED&resulttype=core&format=json
retrieved
10 November 2019
PMC publication ID
147498
1 reference
stated in
Europe PubMed Central
PMC publication ID
147498
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9518479%20AND%20SRC:MED&resulttype=core&format=json
retrieved
10 November 2019
PubMed ID
9518479
1 reference
stated in
Europe PubMed Central
PMC publication ID
147498
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9518479%20AND%20SRC:MED&resulttype=core&format=json
retrieved
10 November 2019
ResearchGate publication ID
13729824
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