(Q39729875)

14 September 2017

title

Application of information theory to feature selection in protein docking (English)

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14 September 2017

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4

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14 September 2017

Olaf G Othersen

1

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14 September 2017

Arno G Stefani

series ordinal

2

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14 September 2017

Johannes B Huber

series ordinal

3

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14 September 2017

publication date

12 July 2011

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Journal of Molecular Modeling

14 September 2017

published in

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14 September 2017

volume

18

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14 September 2017

issue

4

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14 September 2017

page(s)

1285-1297

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Molecular surface recognition: determination of geometric fit between proteins and their ligands by correlation techniques

14 September 2017

cites work

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https://api.crossref.org/works/10.1007%2FS00894-011-1157-6

Hydrogen bonding and molecular surface shape complementarity as a basis for protein docking.

21 January 2018

1 reference

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Hydrophobic docking: a proposed enhancement to molecular recognition techniques.

21 January 2018

1 reference

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Modelling protein docking using shape complementarity, electrostatics and biochemical information

21 January 2018

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An accurate, residue-level, pair potential of mean force for folding and binding based on the distance-scaled, ideal-gas reference state.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00894-011-1157-6

DOCKGROUND system of databases for protein recognition studies: unbound structures for docking

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00894-011-1157-6

Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00894-011-1157-6

Interrogating protein interaction networks through structural biology

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00894-011-1157-6

Structure and function of Salmonella SifA indicate that its interactions with SKIP, SseJ, and RhoA family GTPases induce endosomal tubulation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00894-011-1157-6

Interaction between the SifA Virulence Factor and Its Host Target SKIP Is Essential for Salmonella Pathogenesis

21 January 2018

1 reference

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Information theory in living systems, methods, applications, and challenges.

21 January 2018

1 reference

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Sequence variation in ligand binding sites in proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00894-011-1157-6

Identification of descriptors capturing compound class-specific features by mutual information analysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00894-011-1157-6

Information-theoretic dissection of pairwise contact potentials.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00894-011-1157-6

Contact prediction using mutual information and neural nets

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00894-011-1157-6

Using inferred residue contacts to distinguish between correct and incorrect protein models

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00894-011-1157-6

Information and discrimination in pairwise contact potentials.

21 January 2018

1 reference

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Novel knowledge-based mean force potential at atomic level

21 January 2018

1 reference

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Scoring by Intermolecular Pairwise Propensities of Exposed Residues (SIPPER): A New Efficient Potential for Protein−Protein Docking

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00894-011-1157-6

New algorithm to model protein-protein recognition based on surface complementarity. Applications to antibody-antigen docking

21 January 2018

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12 December 2020

The targets of CAPRI Rounds 13-19.

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12 December 2020

ESCHER: a new docking procedure applied to the reconstruction of protein tertiary structure

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12 December 2020

Transient protein-protein interactions: structural, functional, and network properties

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12 December 2020

Principles of protein-protein interactions

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12 December 2020

Use of pair potentials across protein interfaces in screening predicted docked complexes.

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12 December 2020

Statistical analysis of predominantly transient protein-protein interfaces

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12 December 2020

The subunit interfaces of weakly associated homodimeric proteins

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12 December 2020

DOCKGROUND resource for studying protein-protein interfaces

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12 December 2020

Statistical potentials for fold assessment.

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12 December 2020

A soft, mean-field potential derived from crystal contacts for predicting protein-protein interactions

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12 December 2020

Binding site prediction and improved scoring during flexible protein-protein docking with ATTRACT.

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12 December 2020

Recognizing protein-protein interfaces with empirical potentials and reduced amino acid alphabets

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12 December 2020

Docking and scoring protein interactions: CAPRI 2009

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12 December 2020

Prediction of protein-protein interaction sites using electrostatic desolvation profiles

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12 December 2020

Predicting and annotating catalytic residues: an information theoretic approach.

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12 December 2020

Protein-protein docking tested in blind predictions: the CAPRI experiment

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12 December 2020

DOCKGROUND protein-protein docking decoy set.

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12 December 2020

Information theory-based scoring function for the structure-based prediction of protein-ligand binding affinity

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12 December 2020

An analysis of information content present in protein-DNA interactions

1 reference

12 December 2020

Docking and scoring protein complexes: CAPRI 3rd Edition

1 reference

12 December 2020

10.1007/S00894-011-1157-6

Identifiers

DOI

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release_5vtqex4rgrelrcf7762gqp6ywm

14 September 2017

Fatcat ID

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Fatcat

https://api.fatcat.wiki/v0/release/5vtqex4rgrelrcf7762gqp6ywm

24 November 2022

mapped directly with Wikidata item

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