(Q39855886)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20096096%20AND%20SRC:MED&resulttype=core&format=json

17 January 2020

title

Genome-wide prediction of transcription factor binding sites using an integrated model (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20096096%20AND%20SRC:MED&resulttype=core&format=json

17 January 2020

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20096096%20AND%20SRC:MED&resulttype=core&format=json

17 January 2020

author name string

Bing Ren

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20096096%20AND%20SRC:MED&resulttype=core&format=json

17 January 2020

Wei Wang

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20096096%20AND%20SRC:MED&resulttype=core&format=json

17 January 2020

publication date

22 January 2010

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20096096%20AND%20SRC:MED&resulttype=core&format=json

17 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20096096%20AND%20SRC:MED&resulttype=core&format=json

17 January 2020

volume

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20096096%20AND%20SRC:MED&resulttype=core&format=json

17 January 2020

page(s)

R7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20096096%20AND%20SRC:MED&resulttype=core&format=json

17 January 2020

issue

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20096096%20AND%20SRC:MED&resulttype=core&format=json

https://scigraph.springernature.com/pub.10.1186/gb-2010-11-1-r7

17 January 2020

exact match

0 references

cites work

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22 September 2017

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22 September 2017

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22 September 2017

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22 September 2017

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22 September 2017

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22 September 2017

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A survey of DNA motif finding algorithms

22 September 2017

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JASPAR, the open access database of transcription factor-binding profiles: new content and tools in the 2008 update

22 September 2017

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Genome-wide maps of chromatin state in pluripotent and lineage-committed cells

22 September 2017

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High-resolution profiling of histone methylations in the human genome

22 September 2017

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Analysis of the vertebrate insulator protein CTCF-binding sites in the human genome

22 September 2017

1 reference

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Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome

22 September 2017

1 reference

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Stubb: a program for discovery and analysis of cis-regulatory modules

22 September 2017

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MEME: discovering and analyzing DNA and protein sequence motifs

22 September 2017

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Dissecting self-renewal in stem cells with RNA interference

22 September 2017

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PhyloGibbs: a Gibbs sampling motif finder that incorporates phylogeny

22 September 2017

1 reference

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22 September 2017

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Core transcriptional regulatory circuitry in human embryonic stem cells

22 September 2017

1 reference

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Spatial and temporal recruitment of androgen receptor and its coactivators involves chromosomal looping and polymerase tracking

22 September 2017

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22 September 2017

1 reference

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A high-resolution map of active promoters in the human genome

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2847719

De novo cis-regulatory module elicitation for eukaryotic genomes

22 September 2017

1 reference

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22 September 2017

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22 September 2017

1 reference

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Transcriptional regulatory code of a eukaryotic genome

22 September 2017

1 reference

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22 September 2017

1 reference

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22 September 2017

1 reference

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Combining phylogenetic data with co-regulated genes to identify regulatory motifs

22 September 2017

1 reference

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22 September 2017

1 reference

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22 September 2017

1 reference

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22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2847719

Discovery of novel transcription factor binding sites by statistical overrepresentation

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2847719

Statistical significance of clusters of motifs represented by position specific scoring matrices in nucleotide sequences

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2847719

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22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2847719

BioProspector: discovering conserved DNA motifs in upstream regulatory regions of co-expressed genes.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2847719

Genomic binding sites of the yeast cell-cycle transcription factors SBF and MBF

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2847719

Genome-wide location and function of DNA binding proteins

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2847719

DNA binding sites: representation and discovery

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2847719

Computational identification of cis-regulatory elements associated with groups of functionally related genes in Saccharomyces cerevisiae

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2847719

Combining evidence using p-values: application to sequence homology searches

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2847719

Fitting a mixture model by expectation maximization to discover motifs in biopolymers

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2847719

Discovery of regulatory elements in vertebrates through comparative genomics.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2847719

Phylogenetic motif detection by expectation-maximization on evolutionary mixtures.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2847719

Searching for statistically significant regulatory modules.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2847719

Locating potential enhancer elements by comparative genomics using the EEL software

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2847719

An algorithm for finding signals of unknown length in DNA sequences

2 December 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20096096

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/GB-2010-11-1-R7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20096096%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

17 January 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20096096%20AND%20SRC:MED&resulttype=core&format=json

17 January 2020

1 reference