(Q39864737)

15 September 2017

A strategy to retrieve the whole set of protein modules in microbial proteomes (English)

1 reference

15 September 2017

Stéphanie Le Bouder-Langevin

1

1 reference

15 September 2017

Isabelle Capron-Montaland

2

1 reference

15 September 2017

Renaud De Rosa

3

1 reference

15 September 2017

Bernard Labedan

4

1 reference

15 September 2017

1 December 2002

1 reference

15 September 2017

1 reference

15 September 2017

12

1 reference

15 September 2017

12

1 reference

15 September 2017

1961-1973

1 reference

The Pfam protein families database

15 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187581

Recent improvements to the SMART domain-based sequence annotation resource

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187581

The PROSITE database, its status in 2002

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187581

Deletional bias and the evolution of bacterial genomes

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187581

Homology a personal view on some of the problems

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187581

X-ray structure of MalY from Escherichia coli: a pyridoxal 5′-phosphate-dependent enzyme acting as a modulator in mal gene expression

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187581

ProDom and ProDom-CG: tools for protein domain analysis and whole genome comparisons

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187581

A protein alignment scoring system sensitive at all evolutionary distances

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187581

Identification of common molecular subsequences

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187581

Distinguishing Homologous from Analogous Proteins

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187581

A general method applicable to the search for similarities in the amino acid sequence of two proteins

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187581

Amino acid substitution matrices from an information theoretic perspective

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187581

Exhaustive matching of the entire protein sequence database

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187581

Aligning amino acid sequences: Comparison of commonly used methods

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187581

Protein evolution viewed through Escherichia coli protein sequences: introducing the notion of a structural segment of homology, the module.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187581

Empirical and structural models for insertions and deletions in the divergent evolution of proteins.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187581

The evolutionary relationships between the two bacteria Escherichia coli and Haemophilus influenzae and their putative last common ancestor

20 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/12466301

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

DOMO: a new database of aligned protein domains

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/12466301

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1101/GR.393902

1 reference

release_thj44z25sjcmfblh2woodqim5q

15 September 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/thj44z25sjcmfblh2woodqim5q

mapped directly with Wikidata item

24 November 2022

based on heuristic

1 reference

15 September 2017

PubMed publication ID

12466301

1 reference