(Q39884104)

15 September 2017

Chapter 15. Co-immunoprecipitation techniques for assessing RNA-protein interactions in vivo (English)

1 reference

15 September 2017

Nicholas K Conrad

1

1 reference

PubMed ID

19215765

15 September 2017

language of work or name

English

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publication date

1 January 2008

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15 September 2017

Methods in Enzymology

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15 September 2017

449

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15 September 2017

317-342

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Biochemical analysis of TREX complex recruitment to intronless and intron-containing yeast genes

15 September 2017

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

Regulation of yeast NRD1 expression by premature transcription termination

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

DNA-protein crosslinks: their induction, repair, and biological consequences

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

AU-rich elements and associated factors: are there unifying principles?

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

Lsm proteins bind and stabilize RNAs containing 5' poly(A) tracts

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

Transcription: surprising role for an elusive small nuclear RNA.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

HuR and mRNA stability

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

Open reading frame 50 protein of Kaposi's sarcoma-associated herpesvirus directly activates the viral PAN and K12 genes by binding to related response elements

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

Monoclonal antibody characterization of the C proteins of heterogeneous nuclear ribonucleoprotein complexes in vertebrate cells

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

Tethered function assays using 3' untranslated regions.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

Identification of a Rapid Mammalian Deadenylation-Dependent Decay Pathway and Its Inhibition by a Viral RNA Element

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

Mutational analysis of a viral RNA element that counteracts rapid RNA decay by interaction with the polyadenylate tail

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

A Kaposi's sarcoma virus RNA element that increases the nuclear abundance of intronless transcripts

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

The Herpesvirus saimiri small nuclear RNAs recruit AU-rich element-binding proteins but do not alter host AU-rich element-containing mRNA levels in virally transformed T cells

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

The involvement of AU-rich element-binding proteins in p38 mitogen-activated protein kinase pathway-mediated mRNA stabilisation.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

hnRNP proteins and the biogenesis of mRNA

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

AU-rich elements target small nuclear RNAs as well as mRNAs for rapid degradation

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

The 3' untranslated region of sindbis virus represses deadenylation of viral transcripts in mosquito and Mammalian cells

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

RNA-based affinity purification reveals 7SK RNPs with distinct composition and regulation

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

Evidence that poly(A) binding protein C1 binds nuclear pre-mRNA poly(A) tails

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

Studies on histone organization in the nucleosome using formaldehyde as a reversible cross-linking agent

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

Molecular composition of IMP1 ribonucleoprotein granules

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

Biochemical purification of box H/ACA RNPs involved in pseudouridylation

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

RNA recognition by autoantigens and autoantibodies

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

RIP-Chip: the isolation and identification of mRNAs, microRNAs and protein components of ribonucleoprotein complexes from cell extracts.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

Dynamic association and localization of human H/ACA RNP proteins

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

hnRNP complexes: composition, structure, and function

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

Messenger RNAs are recruited for nuclear export during transcription

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

Two Novel Classes of Small Ribonucleoproteins Detected by Antibodies Associated with Lupus Erythematosus

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

Antibodies to small nuclear RNAs complexed with proteins are produced by patients with systemic lupus erythematosus

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

Cotranscriptional coupling of splicing factor recruitment and precursor messenger RNA splicing in mammalian cells

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

Human Upf proteins target an mRNA for nonsense-mediated decay when bound downstream of a termination codon

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

Nuclear ribonucleoprotein particles probed in living cells

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

Photocross-linking of nucleic acids to associated proteins

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

Distinct RNP complexes of shuttling hnRNP proteins with pre-mRNA and mRNA: candidate intermediates in formation and export of mRNA.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

Evidence for reassociation of RNA-binding proteins after cell lysis: implications for the interpretation of immunoprecipitation analyses

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

Identification of HuR as a protein implicated in AUUUA-mediated mRNA decay

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

The hnRNP C proteins contain a nuclear retention sequence that can override nuclear export signals

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

Reversible cross-linking combined with immunoprecipitation to study RNA-protein interactions in vivo

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

Mapping Polycomb-repressed domains in the bithorax complex using in vivo formaldehyde cross-linked chromatin

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

Analysis of chromatin structure by in vivo formaldehyde cross-linking.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

Biotinylated tags for recovery and characterization of ribonucleoprotein complexes

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

RNA stabilization by the AU-rich element binding protein, HuR, an ELAV protein

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

RNA annealing activities in HeLa nuclei.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

Identification of RNA-protein contacts within functional ribonucleoprotein complexes by RNA site-specific labeling and UV crosslinking

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

Formaldehyde-mediated DNA-protein crosslinking: a probe for in vivo chromatin structures

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

Characterization of interactions between RTA and the promoter of polyadenylated nuclear RNA in Kaposi's sarcoma-associated herpesvirus/human herpesvirus 8.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

RNA affinity tags for purification of RNAs and ribonucleoprotein complexes

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

Polyadenylylated nuclear RNA encoded by Kaposi sarcoma-associated herpesvirus

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

Genomic localization of RNA binding proteins reveals links between pre-mRNA processing and transcription

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

Ribonomics: identifying mRNA subsets in mRNP complexes using antibodies to RNA-binding proteins and genomic arrays

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

CLIP: a method for identifying protein-RNA interaction sites in living cells

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

AU-rich-element-mediated upregulation of translation by FXR1 and Argonaute 2.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

Cross-linking of mRNA to proteins by irradiation of intact cells with ultraviolet light

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

25 Identification of amino acid residues at interface of protein—Nucleic acid complexes by photochemical cross-linking

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

Identification and characterization of proteins binding A + U-rich elements

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

Concerted action of poly(A) nucleases and decapping enzyme in mammalian mRNA turnover

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

Restricted expression of Kaposi sarcoma-associated herpesvirus (human herpesvirus 8) genes in Kaposi sarcoma

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902415-4

7 January 2021

10.1016/S0076-6879(08)02415-4

Identifiers

DOI

1 reference

15 September 2017

1 reference

PubMed ID

19215765