(Q39886253)

8 July 2018

title

Plug-and-play analysis of the human phosphoproteome by targeted high-resolution mass spectrometry (English)

1 reference

8 July 2018

author

Judit Villén

series ordinal

4

1 reference

PubMed publication ID

15 September 2017

Robert T Lawrence

1

1 reference

8 July 2018

Brian C Searle

series ordinal

2

1 reference

8 July 2018

Ariadna Llovet

series ordinal

3

1 reference

8 July 2018

publication date

28 March 2016

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8 July 2018

published in

Nature Methods

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8 July 2018

volume

13

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8 July 2018

issue

5

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8 July 2018

page(s)

431-434

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8 July 2018

Peptide-Centric Proteome Analysis: An Alternative Strategy for the Analysis of Tandem Mass Spectrometry Data

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5915315

An Augmented Multiple-Protease-Based Human Phosphopeptide Atlas.

10 July 2018

1 reference

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Targeted phosphoproteomics of insulin signaling using data-independent acquisition mass spectrometry.

10 July 2018

1 reference

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Signal Transduction Reaction Monitoring Deciphers Site-Specific PI3K-mTOR/MAPK Pathway Dynamics in Oncogene-Induced Senescence.

10 July 2018

1 reference

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DIA-Umpire: comprehensive computational framework for data-independent acquisition proteomics

10 July 2018

1 reference

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PhosphoSitePlus, 2014: mutations, PTMs and recalibrations

10 July 2018

1 reference

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Ultradeep human phosphoproteome reveals a distinct regulatory nature of Tyr and Ser/Thr-based signaling

10 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5915315

Single-step enrichment by Ti4+-IMAC and label-free quantitation enables in-depth monitoring of phosphorylation dynamics with high reproducibility and temporal resolution.

10 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5915315

Comet: an open-source MS/MS sequence database search tool

10 July 2018

1 reference

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Parallel reaction monitoring for high resolution and high mass accuracy quantitative, targeted proteomics

10 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5915315

Quantitative maps of protein phosphorylation sites across 14 different rat organs and tissues

10 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5915315

Targeted data extraction of the MS/MS spectra generated by data-independent acquisition: a new concept for consistent and accurate proteome analysis

10 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5915315

A tissue-specific atlas of mouse protein phosphorylation and expression

10 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5915315

Skyline: an open source document editor for creating and analyzing targeted proteomics experiments

10 July 2018

1 reference

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Global survey of phosphotyrosine signaling identifies oncogenic kinases in lung cancer

10 July 2018

1 reference

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Quantitative mass spectrometry in proteomics: a critical review

10 July 2018

1 reference

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Mechanisms of specificity in protein phosphorylation

10 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5915315

A probability-based approach for high-throughput protein phosphorylation analysis and site localization

10 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5915315

Automated approach for quantitative analysis of complex peptide mixtures from tandem mass spectra

10 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5915315

Absolute quantification of proteins and phosphoproteins from cell lysates by tandem MS

10 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5915315

A sentinel protein assay for simultaneously quantifying cellular processes

10 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5915315

OpenSWATH enables automated, targeted analysis of data-independent acquisition MS data

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5915315

Impact of digestion conditions on phosphoproteomics.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5915315

Semi-supervised learning for peptide identification from shotgun proteomics datasets.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5915315

20 August 2018

Identifiers

DOI

10.1038/NMETH.3811

1 reference

8 July 2018

release_lkkhwn4aifajzdvt5buc6dzkoa

Fatcat ID

0 references

PMC publication ID

5915315

1 reference

8 July 2018

PubMed publication ID

27018578

1 reference

8 July 2018